Protein–RNA interactions for Protein: Q6IN85

PPP4R3A, Serine/threonine-protein phosphatase 4 regulatory subunit 3A, humanhuman

Predictions only

Length 833 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3AQ6IN85 MAPK13-201ENST00000211287 2052 ntAPPRIS P1 TSL 1 (best) BASIC29.22■■■□□ 2.27
PPP4R3AQ6IN85 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC29.22■■■□□ 2.27
PPP4R3AQ6IN85 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC29.22■■■□□ 2.27
PPP4R3AQ6IN85 MAF-201ENST00000326043 2646 ntAPPRIS P3 TSL 1 (best) BASIC29.22■■■□□ 2.27
PPP4R3AQ6IN85 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC29.22■■■□□ 2.27
PPP4R3AQ6IN85 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC29.22■■■□□ 2.27
PPP4R3AQ6IN85 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC29.21■■■□□ 2.27
PPP4R3AQ6IN85 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC29.21■■■□□ 2.27
PPP4R3AQ6IN85 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC29.21■■■□□ 2.27
PPP4R3AQ6IN85 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC29.2■■■□□ 2.26
PPP4R3AQ6IN85 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC29.19■■■□□ 2.26
PPP4R3AQ6IN85 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC29.19■■■□□ 2.26
PPP4R3AQ6IN85 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC29.19■■■□□ 2.26
PPP4R3AQ6IN85 LINC01971-201ENST00000617888 1048 ntBASIC29.19■■■□□ 2.26
PPP4R3AQ6IN85 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC29.19■■■□□ 2.26
PPP4R3AQ6IN85 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC29.19■■■□□ 2.26
PPP4R3AQ6IN85 SLC12A2-202ENST00000343225 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC29.19■■■□□ 2.26
PPP4R3AQ6IN85 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC29.19■■■□□ 2.26
PPP4R3AQ6IN85 BIN1-204ENST00000348750 2074 ntTSL 1 (best) BASIC29.19■■■□□ 2.26
PPP4R3AQ6IN85 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC29.19■■■□□ 2.26
PPP4R3AQ6IN85 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC29.18■■■□□ 2.26
PPP4R3AQ6IN85 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC29.18■■■□□ 2.26
PPP4R3AQ6IN85 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC29.17■■■□□ 2.26
PPP4R3AQ6IN85 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC29.17■■■□□ 2.26
PPP4R3AQ6IN85 TPRA1-202ENST00000355552 1933 ntAPPRIS P1 TSL 1 (best) BASIC29.16■■■□□ 2.26
PPP4R3AQ6IN85 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC29.16■■■□□ 2.26
PPP4R3AQ6IN85 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC29.15■■■□□ 2.26
PPP4R3AQ6IN85 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC29.15■■■□□ 2.26
PPP4R3AQ6IN85 MEX3D-201ENST00000402693 2850 ntAPPRIS P2 TSL 1 (best) BASIC29.15■■■□□ 2.26
PPP4R3AQ6IN85 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC29.15■■■□□ 2.26
PPP4R3AQ6IN85 MEST-211ENST00000437945 1455 ntTSL 5 BASIC29.15■■■□□ 2.26
PPP4R3AQ6IN85 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC29.14■■■□□ 2.26
PPP4R3AQ6IN85 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC29.14■■■□□ 2.26
PPP4R3AQ6IN85 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC29.14■■■□□ 2.26
PPP4R3AQ6IN85 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC29.13■■■□□ 2.25
PPP4R3AQ6IN85 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC29.13■■■□□ 2.25
PPP4R3AQ6IN85 ARHGEF7-206ENST00000375741 5525 ntTSL 1 (best) BASIC29.13■■■□□ 2.25
PPP4R3AQ6IN85 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC29.13■■■□□ 2.25
PPP4R3AQ6IN85 TESK1-206ENST00000620767 2438 ntAPPRIS P1 TSL 5 BASIC29.13■■■□□ 2.25
PPP4R3AQ6IN85 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC29.13■■■□□ 2.25
PPP4R3AQ6IN85 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC29.12■■■□□ 2.25
PPP4R3AQ6IN85 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC29.11■■■□□ 2.25
PPP4R3AQ6IN85 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC29.11■■■□□ 2.25
PPP4R3AQ6IN85 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC29.11■■■□□ 2.25
PPP4R3AQ6IN85 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC29.11■■■□□ 2.25
PPP4R3AQ6IN85 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC29.09■■■□□ 2.25
PPP4R3AQ6IN85 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC29.09■■■□□ 2.25
PPP4R3AQ6IN85 TPI1-201ENST00000229270 1763 ntTSL 1 (best) BASIC29.08■■■□□ 2.25
PPP4R3AQ6IN85 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC29.08■■■□□ 2.25
PPP4R3AQ6IN85 AC100797.4-201ENST00000631653 1827 ntBASIC29.08■■■□□ 2.25
PPP4R3AQ6IN85 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC29.08■■■□□ 2.25
PPP4R3AQ6IN85 RRAGC-201ENST00000373001 2732 ntAPPRIS P1 TSL 1 (best) BASIC29.08■■■□□ 2.25
PPP4R3AQ6IN85 TNFSF12-201ENST00000293825 1553 ntAPPRIS P1 TSL 1 (best) BASIC29.08■■■□□ 2.25
PPP4R3AQ6IN85 FEV-201ENST00000295727 1879 ntAPPRIS P1 TSL 1 (best) BASIC29.07■■■□□ 2.24
PPP4R3AQ6IN85 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC29.07■■■□□ 2.24
PPP4R3AQ6IN85 DUX4L11-201ENST00000611504 1267 ntBASIC29.07■■■□□ 2.24
PPP4R3AQ6IN85 DUX4L12-201ENST00000614593 1267 ntBASIC29.07■■■□□ 2.24
PPP4R3AQ6IN85 DUX4L14-201ENST00000621227 1267 ntBASIC29.07■■■□□ 2.24
PPP4R3AQ6IN85 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC29.06■■■□□ 2.24
PPP4R3AQ6IN85 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC29.06■■■□□ 2.24
PPP4R3AQ6IN85 EFNA1-202ENST00000368407 1926 ntAPPRIS P1 TSL 1 (best) BASIC29.06■■■□□ 2.24
PPP4R3AQ6IN85 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC29.05■■■□□ 2.24
PPP4R3AQ6IN85 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC29.05■■■□□ 2.24
PPP4R3AQ6IN85 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC29.05■■■□□ 2.24
PPP4R3AQ6IN85 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC29.04■■■□□ 2.24
PPP4R3AQ6IN85 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC29.04■■■□□ 2.24
PPP4R3AQ6IN85 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC29.03■■■□□ 2.24
PPP4R3AQ6IN85 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC29.03■■■□□ 2.24
PPP4R3AQ6IN85 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC29.03■■■□□ 2.24
PPP4R3AQ6IN85 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC29.03■■■□□ 2.24
PPP4R3AQ6IN85 DUX4L13-201ENST00000554103 1267 ntBASIC29.03■■■□□ 2.24
PPP4R3AQ6IN85 DUX4L15-201ENST00000611059 1267 ntBASIC29.03■■■□□ 2.24
PPP4R3AQ6IN85 MIR7108-201ENST00000614319 87 ntBASIC29.03■■■□□ 2.24
PPP4R3AQ6IN85 DUX4L23-201ENST00000615195 1269 ntBASIC29.03■■■□□ 2.24
PPP4R3AQ6IN85 DUX4L24-201ENST00000617576 1269 ntBASIC29.03■■■□□ 2.24
PPP4R3AQ6IN85 DUX4L22-201ENST00000618238 1269 ntBASIC29.03■■■□□ 2.24
PPP4R3AQ6IN85 DUX4L20-201ENST00000619712 1269 ntBASIC29.03■■■□□ 2.24
PPP4R3AQ6IN85 DUX4L21-201ENST00000622058 1269 ntBASIC29.03■■■□□ 2.24
PPP4R3AQ6IN85 DUX4L10-201ENST00000622460 1267 ntBASIC29.03■■■□□ 2.24
PPP4R3AQ6IN85 DUX4L25-201ENST00000624915 1269 ntBASIC29.03■■■□□ 2.24
PPP4R3AQ6IN85 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC29.03■■■□□ 2.24
PPP4R3AQ6IN85 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC29.03■■■□□ 2.24
PPP4R3AQ6IN85 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC29.03■■■□□ 2.24
PPP4R3AQ6IN85 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC29.02■■■□□ 2.24
PPP4R3AQ6IN85 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC29.02■■■□□ 2.24
PPP4R3AQ6IN85 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC29.02■■■□□ 2.24
PPP4R3AQ6IN85 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC29.01■■■□□ 2.23
PPP4R3AQ6IN85 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC29.01■■■□□ 2.23
PPP4R3AQ6IN85 CHML-204ENST00000638121 920 ntTSL 2 BASIC29.01■■■□□ 2.23
PPP4R3AQ6IN85 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC28.99■■■□□ 2.23
PPP4R3AQ6IN85 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC28.99■■■□□ 2.23
PPP4R3AQ6IN85 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC28.98■■■□□ 2.23
PPP4R3AQ6IN85 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC28.98■■■□□ 2.23
PPP4R3AQ6IN85 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC28.98■■■□□ 2.23
PPP4R3AQ6IN85 RNF166-209ENST00000567844 633 ntTSL 5 BASIC28.97■■■□□ 2.23
PPP4R3AQ6IN85 EXOC3L4-201ENST00000380069 2293 ntAPPRIS P1 TSL 1 (best) BASIC28.97■■■□□ 2.23
PPP4R3AQ6IN85 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC28.97■■■□□ 2.23
PPP4R3AQ6IN85 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC28.97■■■□□ 2.23
PPP4R3AQ6IN85 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC28.97■■■□□ 2.23
PPP4R3AQ6IN85 AGPS-202ENST00000409888 815 ntTSL 4 BASIC28.96■■■□□ 2.23
Retrieved 100 of 98,524 protein–RNA pairs in 103.7 ms