Protein–RNA interactions for Protein: Q6A009

Ltn1, E3 ubiquitin-protein ligase listerin, mousemouse

Predictions only

Length 1,767 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ltn1Q6A009 Pkd1-207ENSMUST00000228550 1050 ntBASIC28.99■■■□□ 2.23
Ltn1Q6A009 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC28.99■■■□□ 2.23
Ltn1Q6A009 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC28.99■■■□□ 2.23
Ltn1Q6A009 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC28.98■■■□□ 2.23
Ltn1Q6A009 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC28.97■■■□□ 2.23
Ltn1Q6A009 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC28.97■■■□□ 2.23
Ltn1Q6A009 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC28.96■■■□□ 2.23
Ltn1Q6A009 Gm11687-201ENSMUST00000118911 886 ntBASIC28.96■■■□□ 2.23
Ltn1Q6A009 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC28.96■■■□□ 2.23
Ltn1Q6A009 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC28.95■■■□□ 2.23
Ltn1Q6A009 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC28.95■■■□□ 2.23
Ltn1Q6A009 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC28.95■■■□□ 2.23
Ltn1Q6A009 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC28.95■■■□□ 2.23
Ltn1Q6A009 Gm4799-201ENSMUST00000095396 657 ntBASIC28.95■■■□□ 2.22
Ltn1Q6A009 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC28.95■■■□□ 2.22
Ltn1Q6A009 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC28.94■■■□□ 2.22
Ltn1Q6A009 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC28.94■■■□□ 2.22
Ltn1Q6A009 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC28.94■■■□□ 2.22
Ltn1Q6A009 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC28.94■■■□□ 2.22
Ltn1Q6A009 Gm9806-201ENSMUST00000051080 552 ntBASIC28.94■■■□□ 2.22
Ltn1Q6A009 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC28.93■■■□□ 2.22
Ltn1Q6A009 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC28.92■■■□□ 2.22
Ltn1Q6A009 Gm12366-201ENSMUST00000121722 873 ntBASIC28.92■■■□□ 2.22
Ltn1Q6A009 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC28.92■■■□□ 2.22
Ltn1Q6A009 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC28.92■■■□□ 2.22
Ltn1Q6A009 Gm5786-201ENSMUST00000085368 882 ntBASIC28.92■■■□□ 2.22
Ltn1Q6A009 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC28.92■■■□□ 2.22
Ltn1Q6A009 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC28.91■■■□□ 2.22
Ltn1Q6A009 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC28.91■■■□□ 2.22
Ltn1Q6A009 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC28.9■■■□□ 2.22
Ltn1Q6A009 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC28.9■■■□□ 2.22
Ltn1Q6A009 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC28.88■■■□□ 2.21
Ltn1Q6A009 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC28.88■■■□□ 2.21
Ltn1Q6A009 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC28.88■■■□□ 2.21
Ltn1Q6A009 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC28.88■■■□□ 2.21
Ltn1Q6A009 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC28.88■■■□□ 2.21
Ltn1Q6A009 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC28.88■■■□□ 2.21
Ltn1Q6A009 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC28.87■■■□□ 2.21
Ltn1Q6A009 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC28.86■■■□□ 2.21
Ltn1Q6A009 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC28.85■■■□□ 2.21
Ltn1Q6A009 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC28.85■■■□□ 2.21
Ltn1Q6A009 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC28.85■■■□□ 2.21
Ltn1Q6A009 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC28.85■■■□□ 2.21
Ltn1Q6A009 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC28.84■■■□□ 2.21
Ltn1Q6A009 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC28.84■■■□□ 2.21
Ltn1Q6A009 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC28.84■■■□□ 2.21
Ltn1Q6A009 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC28.83■■■□□ 2.21
Ltn1Q6A009 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC28.83■■■□□ 2.21
Ltn1Q6A009 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC28.83■■■□□ 2.21
Ltn1Q6A009 AC154454.1-201ENSMUST00000225253 216 ntBASIC28.83■■■□□ 2.21
Ltn1Q6A009 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC28.82■■■□□ 2.2
Ltn1Q6A009 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC28.82■■■□□ 2.2
Ltn1Q6A009 Gm27502-201ENSMUST00000183495 199 ntBASIC28.81■■■□□ 2.2
Ltn1Q6A009 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC28.81■■■□□ 2.2
Ltn1Q6A009 Mir3960-201ENSMUST00000198213 73 ntBASIC28.81■■■□□ 2.2
Ltn1Q6A009 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC28.81■■■□□ 2.2
Ltn1Q6A009 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC28.81■■■□□ 2.2
Ltn1Q6A009 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC28.81■■■□□ 2.2
Ltn1Q6A009 Gm16437-201ENSMUST00000025669 507 ntBASIC28.8■■■□□ 2.2
Ltn1Q6A009 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC28.79■■■□□ 2.2
Ltn1Q6A009 Gm37136-201ENSMUST00000194368 194 ntBASIC28.79■■■□□ 2.2
Ltn1Q6A009 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC28.79■■■□□ 2.2
Ltn1Q6A009 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC28.79■■■□□ 2.2
Ltn1Q6A009 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC28.78■■■□□ 2.2
Ltn1Q6A009 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC28.78■■■□□ 2.2
Ltn1Q6A009 AC153504.1-201ENSMUST00000218379 2290 ntBASIC28.78■■■□□ 2.2
Ltn1Q6A009 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC28.77■■■□□ 2.2
Ltn1Q6A009 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC28.74■■■□□ 2.19
Ltn1Q6A009 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC28.74■■■□□ 2.19
Ltn1Q6A009 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC28.73■■■□□ 2.19
Ltn1Q6A009 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC28.73■■■□□ 2.19
Ltn1Q6A009 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC28.73■■■□□ 2.19
Ltn1Q6A009 Zxda-201ENSMUST00000117281 2621 ntBASIC28.72■■■□□ 2.19
Ltn1Q6A009 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC28.72■■■□□ 2.19
Ltn1Q6A009 Gm9905-201ENSMUST00000065740 1845 ntBASIC28.71■■■□□ 2.19
Ltn1Q6A009 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC28.71■■■□□ 2.19
Ltn1Q6A009 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC28.71■■■□□ 2.19
Ltn1Q6A009 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC28.7■■■□□ 2.18
Ltn1Q6A009 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC28.7■■■□□ 2.18
Ltn1Q6A009 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC28.69■■■□□ 2.18
Ltn1Q6A009 Gm7332-201ENSMUST00000118351 454 ntBASIC28.66■■■□□ 2.18
Ltn1Q6A009 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC28.66■■■□□ 2.18
Ltn1Q6A009 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC28.65■■■□□ 2.18
Ltn1Q6A009 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC28.65■■■□□ 2.18
Ltn1Q6A009 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC28.64■■■□□ 2.18
Ltn1Q6A009 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC28.63■■■□□ 2.17
Ltn1Q6A009 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC28.62■■■□□ 2.17
Ltn1Q6A009 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC28.62■■■□□ 2.17
Ltn1Q6A009 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC28.62■■■□□ 2.17
Ltn1Q6A009 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC28.62■■■□□ 2.17
Ltn1Q6A009 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC28.61■■■□□ 2.17
Ltn1Q6A009 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC28.6■■■□□ 2.17
Ltn1Q6A009 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC28.6■■■□□ 2.17
Ltn1Q6A009 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC28.6■■■□□ 2.17
Ltn1Q6A009 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC28.6■■■□□ 2.17
Ltn1Q6A009 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC28.59■■■□□ 2.17
Ltn1Q6A009 AC122317.2-201ENSMUST00000218708 1248 ntBASIC28.59■■■□□ 2.17
Ltn1Q6A009 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC28.59■■■□□ 2.17
Ltn1Q6A009 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC28.59■■■□□ 2.17
Ltn1Q6A009 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC28.58■■■□□ 2.17
Retrieved 100 of 76,532 protein–RNA pairs in 72.8 ms