Protein–RNA interactions for Protein: Q61239

Fnta, Protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha, mousemouse

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FntaQ61239 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC24.87■■□□□ 1.57
FntaQ61239 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC24.87■■□□□ 1.57
FntaQ61239 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC24.87■■□□□ 1.57
FntaQ61239 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC24.87■■□□□ 1.57
FntaQ61239 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
FntaQ61239 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
FntaQ61239 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC24.85■■□□□ 1.57
FntaQ61239 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC24.85■■□□□ 1.57
FntaQ61239 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC24.85■■□□□ 1.57
FntaQ61239 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC24.84■■□□□ 1.57
FntaQ61239 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
FntaQ61239 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.57
FntaQ61239 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.57
FntaQ61239 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC24.83■■□□□ 1.56
FntaQ61239 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC24.83■■□□□ 1.56
FntaQ61239 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC24.83■■□□□ 1.56
FntaQ61239 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC24.83■■□□□ 1.56
FntaQ61239 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
FntaQ61239 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC24.82■■□□□ 1.56
FntaQ61239 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC24.82■■□□□ 1.56
FntaQ61239 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
FntaQ61239 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC24.81■■□□□ 1.56
FntaQ61239 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC24.81■■□□□ 1.56
FntaQ61239 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC24.81■■□□□ 1.56
FntaQ61239 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
FntaQ61239 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
FntaQ61239 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC24.79■■□□□ 1.56
FntaQ61239 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC24.78■■□□□ 1.56
FntaQ61239 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC24.77■■□□□ 1.56
FntaQ61239 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC24.77■■□□□ 1.56
FntaQ61239 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
FntaQ61239 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
FntaQ61239 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
FntaQ61239 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
FntaQ61239 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC24.76■■□□□ 1.55
FntaQ61239 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
FntaQ61239 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC24.76■■□□□ 1.55
FntaQ61239 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC24.76■■□□□ 1.55
FntaQ61239 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
FntaQ61239 AC122428.3-201ENSMUST00000215551 2290 ntBASIC24.75■■□□□ 1.55
FntaQ61239 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC24.75■■□□□ 1.55
FntaQ61239 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC24.75■■□□□ 1.55
FntaQ61239 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
FntaQ61239 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
FntaQ61239 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
FntaQ61239 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC24.74■■□□□ 1.55
FntaQ61239 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC24.74■■□□□ 1.55
FntaQ61239 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
FntaQ61239 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC24.74■■□□□ 1.55
FntaQ61239 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
FntaQ61239 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC24.73■■□□□ 1.55
FntaQ61239 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC24.73■■□□□ 1.55
FntaQ61239 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
FntaQ61239 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC24.72■■□□□ 1.55
FntaQ61239 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC24.72■■□□□ 1.55
FntaQ61239 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
FntaQ61239 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC24.72■■□□□ 1.55
FntaQ61239 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC24.72■■□□□ 1.55
FntaQ61239 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC24.71■■□□□ 1.55
FntaQ61239 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.55
FntaQ61239 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC24.7■■□□□ 1.54
FntaQ61239 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
FntaQ61239 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
FntaQ61239 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
FntaQ61239 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC24.7■■□□□ 1.54
FntaQ61239 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC24.7■■□□□ 1.54
FntaQ61239 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC24.69■■□□□ 1.54
FntaQ61239 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
FntaQ61239 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
FntaQ61239 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
FntaQ61239 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC24.69■■□□□ 1.54
FntaQ61239 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC24.68■■□□□ 1.54
FntaQ61239 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
FntaQ61239 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC24.68■■□□□ 1.54
FntaQ61239 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
FntaQ61239 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC24.68■■□□□ 1.54
FntaQ61239 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC24.68■■□□□ 1.54
FntaQ61239 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC24.67■■□□□ 1.54
FntaQ61239 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
FntaQ61239 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
FntaQ61239 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC24.67■■□□□ 1.54
FntaQ61239 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC24.66■■□□□ 1.54
FntaQ61239 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC24.65■■□□□ 1.54
FntaQ61239 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC24.65■■□□□ 1.54
FntaQ61239 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC24.64■■□□□ 1.54
FntaQ61239 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.54
FntaQ61239 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC24.64■■□□□ 1.53
FntaQ61239 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.53
FntaQ61239 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC24.64■■□□□ 1.53
FntaQ61239 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC24.63■■□□□ 1.53
FntaQ61239 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC24.63■■□□□ 1.53
FntaQ61239 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC24.63■■□□□ 1.53
FntaQ61239 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
FntaQ61239 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC24.61■■□□□ 1.53
FntaQ61239 Gm43863-201ENSMUST00000203822 1192 ntBASIC24.61■■□□□ 1.53
FntaQ61239 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC24.61■■□□□ 1.53
FntaQ61239 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
FntaQ61239 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC24.61■■□□□ 1.53
FntaQ61239 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC24.6■■□□□ 1.53
FntaQ61239 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC24.6■■□□□ 1.53
Retrieved 100 of 76,532 protein–RNA pairs in 36.8 ms