Protein–RNA interactions for Protein: Q61191

Hcfc1, Host cell factor 1, mousemouse

Known RBP Predictions only

Length 2,045 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hcfc1Q61191 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Hcfc1Q61191 Gm16437-201ENSMUST00000025669 507 ntBASIC20.52■□□□□ 0.88
Hcfc1Q61191 Gm4799-201ENSMUST00000095396 657 ntBASIC20.52■□□□□ 0.88
Hcfc1Q61191 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC20.52■□□□□ 0.87
Hcfc1Q61191 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC20.51■□□□□ 0.87
Hcfc1Q61191 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC20.51■□□□□ 0.87
Hcfc1Q61191 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Hcfc1Q61191 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Hcfc1Q61191 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Hcfc1Q61191 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Hcfc1Q61191 Gm7332-201ENSMUST00000118351 454 ntBASIC20.49■□□□□ 0.87
Hcfc1Q61191 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC20.49■□□□□ 0.87
Hcfc1Q61191 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC20.49■□□□□ 0.87
Hcfc1Q61191 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Hcfc1Q61191 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC20.49■□□□□ 0.87
Hcfc1Q61191 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Hcfc1Q61191 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
Hcfc1Q61191 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
Hcfc1Q61191 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Hcfc1Q61191 Mir3960-201ENSMUST00000198213 73 ntBASIC20.46■□□□□ 0.87
Hcfc1Q61191 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Hcfc1Q61191 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Hcfc1Q61191 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC20.46■□□□□ 0.87
Hcfc1Q61191 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Hcfc1Q61191 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
Hcfc1Q61191 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Hcfc1Q61191 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Hcfc1Q61191 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Hcfc1Q61191 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Hcfc1Q61191 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
Hcfc1Q61191 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Hcfc1Q61191 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Hcfc1Q61191 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Hcfc1Q61191 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Hcfc1Q61191 Gm37136-201ENSMUST00000194368 194 ntBASIC20.42■□□□□ 0.86
Hcfc1Q61191 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
Hcfc1Q61191 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC20.41■□□□□ 0.86
Hcfc1Q61191 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Hcfc1Q61191 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Hcfc1Q61191 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Hcfc1Q61191 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Hcfc1Q61191 AC154454.1-201ENSMUST00000225253 216 ntBASIC20.41■□□□□ 0.86
Hcfc1Q61191 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Hcfc1Q61191 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC20.4■□□□□ 0.86
Hcfc1Q61191 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Hcfc1Q61191 Gm27502-201ENSMUST00000183495 199 ntBASIC20.39■□□□□ 0.86
Hcfc1Q61191 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Hcfc1Q61191 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Hcfc1Q61191 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC20.38■□□□□ 0.85
Hcfc1Q61191 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Hcfc1Q61191 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Hcfc1Q61191 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Hcfc1Q61191 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Hcfc1Q61191 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Hcfc1Q61191 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Hcfc1Q61191 Gm9905-201ENSMUST00000065740 1845 ntBASIC20.34■□□□□ 0.85
Hcfc1Q61191 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Hcfc1Q61191 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Hcfc1Q61191 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.85
Hcfc1Q61191 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Hcfc1Q61191 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Hcfc1Q61191 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Hcfc1Q61191 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
Hcfc1Q61191 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC20.31■□□□□ 0.84
Hcfc1Q61191 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC20.31■□□□□ 0.84
Hcfc1Q61191 Gm12818-201ENSMUST00000117562 1349 ntBASIC20.31■□□□□ 0.84
Hcfc1Q61191 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
Hcfc1Q61191 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Hcfc1Q61191 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC20.3■□□□□ 0.84
Hcfc1Q61191 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Hcfc1Q61191 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Hcfc1Q61191 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Hcfc1Q61191 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Hcfc1Q61191 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC20.29■□□□□ 0.84
Hcfc1Q61191 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Hcfc1Q61191 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
Hcfc1Q61191 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Hcfc1Q61191 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC20.27■□□□□ 0.84
Hcfc1Q61191 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Hcfc1Q61191 AC122317.2-201ENSMUST00000218708 1248 ntBASIC20.27■□□□□ 0.84
Hcfc1Q61191 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
Hcfc1Q61191 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Hcfc1Q61191 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC20.27■□□□□ 0.84
Hcfc1Q61191 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Hcfc1Q61191 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Hcfc1Q61191 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC20.27■□□□□ 0.84
Hcfc1Q61191 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC20.26■□□□□ 0.83
Hcfc1Q61191 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
Hcfc1Q61191 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Hcfc1Q61191 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC20.26■□□□□ 0.83
Hcfc1Q61191 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Hcfc1Q61191 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Hcfc1Q61191 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Hcfc1Q61191 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
Hcfc1Q61191 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Hcfc1Q61191 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
Hcfc1Q61191 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Hcfc1Q61191 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Hcfc1Q61191 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC20.24■□□□□ 0.83
Hcfc1Q61191 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 65.4 ms