Protein–RNA interactions for Protein: Q5VTQ0

TTC39B, Tetratricopeptide repeat protein 39B, humanhuman

Predicted RBP Predictions only

Length 682 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39BQ5VTQ0 ZIC2-201ENST00000376335 2983 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
TTC39BQ5VTQ0 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC26.67■■□□□ 1.86
TTC39BQ5VTQ0 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC26.67■■□□□ 1.86
TTC39BQ5VTQ0 RASSF8-202ENST00000381352 2320 ntTSL 1 (best) BASIC26.66■■□□□ 1.86
TTC39BQ5VTQ0 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC26.66■■□□□ 1.86
TTC39BQ5VTQ0 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC26.66■■□□□ 1.86
TTC39BQ5VTQ0 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC26.66■■□□□ 1.86
TTC39BQ5VTQ0 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC26.65■■□□□ 1.86
TTC39BQ5VTQ0 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC26.65■■□□□ 1.86
TTC39BQ5VTQ0 CCND3-203ENST00000372991 2085 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.86
TTC39BQ5VTQ0 PVT1-219ENST00000523427 938 ntTSL 3 BASIC26.63■■□□□ 1.85
TTC39BQ5VTQ0 DUX4L11-201ENST00000611504 1267 ntBASIC26.63■■□□□ 1.85
TTC39BQ5VTQ0 DUX4L12-201ENST00000614593 1267 ntBASIC26.63■■□□□ 1.85
TTC39BQ5VTQ0 DUX4L14-201ENST00000621227 1267 ntBASIC26.63■■□□□ 1.85
TTC39BQ5VTQ0 IRX1-201ENST00000302006 1858 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
TTC39BQ5VTQ0 IL17D-201ENST00000304920 1861 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
TTC39BQ5VTQ0 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC26.63■■□□□ 1.85
TTC39BQ5VTQ0 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
TTC39BQ5VTQ0 MACF1-219ENST00000484793 834 ntTSL 2 BASIC26.62■■□□□ 1.85
TTC39BQ5VTQ0 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC26.62■■□□□ 1.85
TTC39BQ5VTQ0 YAP1-204ENST00000526343 2393 ntTSL 5 BASIC26.61■■□□□ 1.85
TTC39BQ5VTQ0 AGPS-202ENST00000409888 815 ntTSL 4 BASIC26.61■■□□□ 1.85
TTC39BQ5VTQ0 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC26.61■■□□□ 1.85
TTC39BQ5VTQ0 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC26.6■■□□□ 1.85
TTC39BQ5VTQ0 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC26.6■■□□□ 1.85
TTC39BQ5VTQ0 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC26.6■■□□□ 1.85
TTC39BQ5VTQ0 RNF166-209ENST00000567844 633 ntTSL 5 BASIC26.6■■□□□ 1.85
TTC39BQ5VTQ0 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC26.6■■□□□ 1.85
TTC39BQ5VTQ0 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
TTC39BQ5VTQ0 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC26.59■■□□□ 1.85
TTC39BQ5VTQ0 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC26.59■■□□□ 1.85
TTC39BQ5VTQ0 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC26.58■■□□□ 1.85
TTC39BQ5VTQ0 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
TTC39BQ5VTQ0 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC26.58■■□□□ 1.85
TTC39BQ5VTQ0 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC26.58■■□□□ 1.85
TTC39BQ5VTQ0 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC26.58■■□□□ 1.85
TTC39BQ5VTQ0 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC26.57■■□□□ 1.84
TTC39BQ5VTQ0 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
TTC39BQ5VTQ0 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
TTC39BQ5VTQ0 AC135983.2-203ENST00000454486 1613 ntBASIC26.57■■□□□ 1.84
TTC39BQ5VTQ0 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
TTC39BQ5VTQ0 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC26.56■■□□□ 1.84
TTC39BQ5VTQ0 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC26.55■■□□□ 1.84
TTC39BQ5VTQ0 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
TTC39BQ5VTQ0 DUX4L13-201ENST00000554103 1267 ntBASIC26.54■■□□□ 1.84
TTC39BQ5VTQ0 DUX4L15-201ENST00000611059 1267 ntBASIC26.54■■□□□ 1.84
TTC39BQ5VTQ0 DUX4L23-201ENST00000615195 1269 ntBASIC26.54■■□□□ 1.84
TTC39BQ5VTQ0 DUX4L24-201ENST00000617576 1269 ntBASIC26.54■■□□□ 1.84
TTC39BQ5VTQ0 DUX4L22-201ENST00000618238 1269 ntBASIC26.54■■□□□ 1.84
TTC39BQ5VTQ0 DUX4L20-201ENST00000619712 1269 ntBASIC26.54■■□□□ 1.84
TTC39BQ5VTQ0 DUX4L21-201ENST00000622058 1269 ntBASIC26.54■■□□□ 1.84
TTC39BQ5VTQ0 DUX4L10-201ENST00000622460 1267 ntBASIC26.54■■□□□ 1.84
TTC39BQ5VTQ0 DUX4L25-201ENST00000624915 1269 ntBASIC26.54■■□□□ 1.84
TTC39BQ5VTQ0 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC26.54■■□□□ 1.84
TTC39BQ5VTQ0 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
TTC39BQ5VTQ0 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
TTC39BQ5VTQ0 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
TTC39BQ5VTQ0 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
TTC39BQ5VTQ0 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC26.52■■□□□ 1.84
TTC39BQ5VTQ0 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC26.52■■□□□ 1.84
TTC39BQ5VTQ0 AP004833.2-201ENST00000532228 1454 ntBASIC26.52■■□□□ 1.84
TTC39BQ5VTQ0 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
TTC39BQ5VTQ0 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC26.51■■□□□ 1.83
TTC39BQ5VTQ0 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC26.51■■□□□ 1.83
TTC39BQ5VTQ0 WHAMMP2-203ENST00000563942 1603 ntBASIC26.5■■□□□ 1.83
TTC39BQ5VTQ0 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC26.5■■□□□ 1.83
TTC39BQ5VTQ0 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC26.5■■□□□ 1.83
TTC39BQ5VTQ0 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
TTC39BQ5VTQ0 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC26.5■■□□□ 1.83
TTC39BQ5VTQ0 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
TTC39BQ5VTQ0 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC26.5■■□□□ 1.83
TTC39BQ5VTQ0 MIR3648-2-201ENST00000581792 180 ntBASIC26.5■■□□□ 1.83
TTC39BQ5VTQ0 MIR3648-1-201ENST00000615959 180 ntBASIC26.5■■□□□ 1.83
TTC39BQ5VTQ0 CHML-204ENST00000638121 920 ntTSL 2 BASIC26.5■■□□□ 1.83
TTC39BQ5VTQ0 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC26.5■■□□□ 1.83
TTC39BQ5VTQ0 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC26.5■■□□□ 1.83
TTC39BQ5VTQ0 SLC16A11-201ENST00000308009 1803 ntAPPRIS P2 TSL 1 (best) BASIC26.5■■□□□ 1.83
TTC39BQ5VTQ0 AC142086.6-201ENST00000621154 1765 ntBASIC26.49■■□□□ 1.83
TTC39BQ5VTQ0 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC26.49■■□□□ 1.83
TTC39BQ5VTQ0 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
TTC39BQ5VTQ0 CR559946.2-201ENST00000623684 991 ntBASIC26.49■■□□□ 1.83
TTC39BQ5VTQ0 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
TTC39BQ5VTQ0 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
TTC39BQ5VTQ0 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
TTC39BQ5VTQ0 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
TTC39BQ5VTQ0 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC26.48■■□□□ 1.83
TTC39BQ5VTQ0 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC26.48■■□□□ 1.83
TTC39BQ5VTQ0 GDI1-215ENST00000630693 786 ntTSL 4 BASIC26.48■■□□□ 1.83
TTC39BQ5VTQ0 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC26.48■■□□□ 1.83
TTC39BQ5VTQ0 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC26.48■■□□□ 1.83
TTC39BQ5VTQ0 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
TTC39BQ5VTQ0 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
TTC39BQ5VTQ0 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC26.47■■□□□ 1.83
TTC39BQ5VTQ0 FAM117A-201ENST00000240364 2365 ntAPPRIS P2 TSL 1 (best) BASIC26.47■■□□□ 1.83
TTC39BQ5VTQ0 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
TTC39BQ5VTQ0 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC26.46■■□□□ 1.83
TTC39BQ5VTQ0 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.83
TTC39BQ5VTQ0 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.82
TTC39BQ5VTQ0 HLA-V-202ENST00000446817 847 ntBASIC26.45■■□□□ 1.82
TTC39BQ5VTQ0 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC26.45■■□□□ 1.82
Retrieved 100 of 98,524 protein–RNA pairs in 44.6 ms