Protein–RNA interactions for Protein: Q5U430

Ubr3, E3 ubiquitin-protein ligase UBR3, mousemouse

Predictions only

Length 1,889 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr3Q5U430 AC154454.1-201ENSMUST00000225253 216 ntBASIC30.06■■■□□ 2.4
Ubr3Q5U430 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC30.04■■■□□ 2.4
Ubr3Q5U430 Gm7332-201ENSMUST00000118351 454 ntBASIC30.04■■■□□ 2.4
Ubr3Q5U430 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC30.04■■■□□ 2.4
Ubr3Q5U430 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC30.02■■■□□ 2.4
Ubr3Q5U430 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC30.01■■■□□ 2.39
Ubr3Q5U430 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC30■■■□□ 2.39
Ubr3Q5U430 Mir3960-201ENSMUST00000198213 73 ntBASIC29.99■■■□□ 2.39
Ubr3Q5U430 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC29.99■■■□□ 2.39
Ubr3Q5U430 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC29.98■■■□□ 2.39
Ubr3Q5U430 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC29.97■■■□□ 2.39
Ubr3Q5U430 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC29.96■■■□□ 2.39
Ubr3Q5U430 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC29.96■■■□□ 2.39
Ubr3Q5U430 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC29.95■■■□□ 2.38
Ubr3Q5U430 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC29.93■■■□□ 2.38
Ubr3Q5U430 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC29.92■■■□□ 2.38
Ubr3Q5U430 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC29.92■■■□□ 2.38
Ubr3Q5U430 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC29.91■■■□□ 2.38
Ubr3Q5U430 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC29.91■■■□□ 2.38
Ubr3Q5U430 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC29.91■■■□□ 2.38
Ubr3Q5U430 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC29.91■■■□□ 2.38
Ubr3Q5U430 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC29.91■■■□□ 2.38
Ubr3Q5U430 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC29.9■■■□□ 2.38
Ubr3Q5U430 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC29.9■■■□□ 2.38
Ubr3Q5U430 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC29.89■■■□□ 2.38
Ubr3Q5U430 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC29.89■■■□□ 2.38
Ubr3Q5U430 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC29.88■■■□□ 2.37
Ubr3Q5U430 Gm37136-201ENSMUST00000194368 194 ntBASIC29.87■■■□□ 2.37
Ubr3Q5U430 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC29.87■■■□□ 2.37
Ubr3Q5U430 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC29.87■■■□□ 2.37
Ubr3Q5U430 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC29.86■■■□□ 2.37
Ubr3Q5U430 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC29.86■■■□□ 2.37
Ubr3Q5U430 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC29.86■■■□□ 2.37
Ubr3Q5U430 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC29.86■■■□□ 2.37
Ubr3Q5U430 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC29.85■■■□□ 2.37
Ubr3Q5U430 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC29.85■■■□□ 2.37
Ubr3Q5U430 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC29.85■■■□□ 2.37
Ubr3Q5U430 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC29.85■■■□□ 2.37
Ubr3Q5U430 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC29.85■■■□□ 2.37
Ubr3Q5U430 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC29.84■■■□□ 2.37
Ubr3Q5U430 AC151971.4-201ENSMUST00000214717 704 ntBASIC29.84■■■□□ 2.37
Ubr3Q5U430 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC29.84■■■□□ 2.37
Ubr3Q5U430 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC29.83■■■□□ 2.37
Ubr3Q5U430 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC29.83■■■□□ 2.37
Ubr3Q5U430 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC29.82■■■□□ 2.37
Ubr3Q5U430 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC29.82■■■□□ 2.37
Ubr3Q5U430 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC29.82■■■□□ 2.36
Ubr3Q5U430 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC29.82■■■□□ 2.36
Ubr3Q5U430 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC29.81■■■□□ 2.36
Ubr3Q5U430 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC29.8■■■□□ 2.36
Ubr3Q5U430 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC29.79■■■□□ 2.36
Ubr3Q5U430 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC29.78■■■□□ 2.36
Ubr3Q5U430 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC29.78■■■□□ 2.36
Ubr3Q5U430 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC29.78■■■□□ 2.36
Ubr3Q5U430 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC29.78■■■□□ 2.36
Ubr3Q5U430 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC29.78■■■□□ 2.36
Ubr3Q5U430 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC29.77■■■□□ 2.36
Ubr3Q5U430 Gm14523-201ENSMUST00000117260 558 ntBASIC29.77■■■□□ 2.36
Ubr3Q5U430 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC29.76■■■□□ 2.36
Ubr3Q5U430 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC29.76■■■□□ 2.35
Ubr3Q5U430 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC29.75■■■□□ 2.35
Ubr3Q5U430 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC29.75■■■□□ 2.35
Ubr3Q5U430 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC29.74■■■□□ 2.35
Ubr3Q5U430 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC29.74■■■□□ 2.35
Ubr3Q5U430 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC29.74■■■□□ 2.35
Ubr3Q5U430 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC29.73■■■□□ 2.35
Ubr3Q5U430 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC29.72■■■□□ 2.35
Ubr3Q5U430 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC29.72■■■□□ 2.35
Ubr3Q5U430 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC29.72■■■□□ 2.35
Ubr3Q5U430 Gm12818-201ENSMUST00000117562 1349 ntBASIC29.71■■■□□ 2.35
Ubr3Q5U430 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC29.71■■■□□ 2.35
Ubr3Q5U430 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC29.7■■■□□ 2.35
Ubr3Q5U430 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC29.7■■■□□ 2.35
Ubr3Q5U430 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC29.7■■■□□ 2.35
Ubr3Q5U430 Gm9905-201ENSMUST00000065740 1845 ntBASIC29.7■■■□□ 2.34
Ubr3Q5U430 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC29.69■■■□□ 2.34
Ubr3Q5U430 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC29.69■■■□□ 2.34
Ubr3Q5U430 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC29.68■■■□□ 2.34
Ubr3Q5U430 AC122317.2-201ENSMUST00000218708 1248 ntBASIC29.68■■■□□ 2.34
Ubr3Q5U430 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC29.68■■■□□ 2.34
Ubr3Q5U430 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC29.68■■■□□ 2.34
Ubr3Q5U430 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC29.67■■■□□ 2.34
Ubr3Q5U430 Gm13889-201ENSMUST00000099689 1386 ntBASIC29.67■■■□□ 2.34
Ubr3Q5U430 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC29.67■■■□□ 2.34
Ubr3Q5U430 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC29.67■■■□□ 2.34
Ubr3Q5U430 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC29.66■■■□□ 2.34
Ubr3Q5U430 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC29.65■■■□□ 2.34
Ubr3Q5U430 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC29.65■■■□□ 2.34
Ubr3Q5U430 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC29.65■■■□□ 2.34
Ubr3Q5U430 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC29.65■■■□□ 2.34
Ubr3Q5U430 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC29.65■■■□□ 2.34
Ubr3Q5U430 Gm5812-201ENSMUST00000061073 957 ntBASIC29.65■■■□□ 2.34
Ubr3Q5U430 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC29.64■■■□□ 2.34
Ubr3Q5U430 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC29.64■■■□□ 2.34
Ubr3Q5U430 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC29.63■■■□□ 2.33
Ubr3Q5U430 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC29.63■■■□□ 2.33
Ubr3Q5U430 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC29.63■■■□□ 2.33
Ubr3Q5U430 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC29.63■■■□□ 2.33
Ubr3Q5U430 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC29.63■■■□□ 2.33
Ubr3Q5U430 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC29.63■■■□□ 2.33
Retrieved 100 of 76,532 protein–RNA pairs in 16.6 ms