Protein–RNA interactions for Protein: Q5DTM8

Rnf20, E3 ubiquitin-protein ligase BRE1A, mousemouse

Predictions only

Length 973 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf20Q5DTM8 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC28.1■■■□□ 2.09
Rnf20Q5DTM8 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC28.1■■■□□ 2.09
Rnf20Q5DTM8 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC28.1■■■□□ 2.09
Rnf20Q5DTM8 Nkain2-201ENSMUST00000092602 558 ntBASIC28.09■■■□□ 2.09
Rnf20Q5DTM8 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC28.09■■■□□ 2.09
Rnf20Q5DTM8 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC28.08■■■□□ 2.09
Rnf20Q5DTM8 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC28.08■■■□□ 2.09
Rnf20Q5DTM8 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC28.07■■■□□ 2.08
Rnf20Q5DTM8 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC28.07■■■□□ 2.08
Rnf20Q5DTM8 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC28.07■■■□□ 2.08
Rnf20Q5DTM8 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC28.07■■■□□ 2.08
Rnf20Q5DTM8 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC28.06■■■□□ 2.08
Rnf20Q5DTM8 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC28.06■■■□□ 2.08
Rnf20Q5DTM8 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC28.06■■■□□ 2.08
Rnf20Q5DTM8 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC28.05■■■□□ 2.08
Rnf20Q5DTM8 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC28.05■■■□□ 2.08
Rnf20Q5DTM8 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC28.05■■■□□ 2.08
Rnf20Q5DTM8 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC28.05■■■□□ 2.08
Rnf20Q5DTM8 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC28.04■■■□□ 2.08
Rnf20Q5DTM8 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC28.04■■■□□ 2.08
Rnf20Q5DTM8 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC28.03■■■□□ 2.08
Rnf20Q5DTM8 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC28.03■■■□□ 2.08
Rnf20Q5DTM8 Gm42809-201ENSMUST00000198429 1138 ntBASIC28.02■■■□□ 2.08
Rnf20Q5DTM8 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC28.01■■■□□ 2.07
Rnf20Q5DTM8 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC28■■■□□ 2.07
Rnf20Q5DTM8 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC27.99■■■□□ 2.07
Rnf20Q5DTM8 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC27.99■■■□□ 2.07
Rnf20Q5DTM8 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC27.99■■■□□ 2.07
Rnf20Q5DTM8 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC27.98■■■□□ 2.07
Rnf20Q5DTM8 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC27.98■■■□□ 2.07
Rnf20Q5DTM8 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC27.98■■■□□ 2.07
Rnf20Q5DTM8 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC27.97■■■□□ 2.07
Rnf20Q5DTM8 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC27.97■■■□□ 2.07
Rnf20Q5DTM8 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC27.97■■■□□ 2.07
Rnf20Q5DTM8 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC27.97■■■□□ 2.07
Rnf20Q5DTM8 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC27.96■■■□□ 2.07
Rnf20Q5DTM8 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC27.96■■■□□ 2.07
Rnf20Q5DTM8 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC27.95■■■□□ 2.07
Rnf20Q5DTM8 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC27.95■■■□□ 2.06
Rnf20Q5DTM8 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC27.95■■■□□ 2.06
Rnf20Q5DTM8 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC27.94■■■□□ 2.06
Rnf20Q5DTM8 Gm9939-201ENSMUST00000067161 1154 ntBASIC27.94■■■□□ 2.06
Rnf20Q5DTM8 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC27.93■■■□□ 2.06
Rnf20Q5DTM8 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC27.92■■■□□ 2.06
Rnf20Q5DTM8 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC27.92■■■□□ 2.06
Rnf20Q5DTM8 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC27.92■■■□□ 2.06
Rnf20Q5DTM8 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC27.91■■■□□ 2.06
Rnf20Q5DTM8 AC153890.1-201ENSMUST00000220021 2469 ntBASIC27.91■■■□□ 2.06
Rnf20Q5DTM8 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC27.91■■■□□ 2.06
Rnf20Q5DTM8 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC27.9■■■□□ 2.06
Rnf20Q5DTM8 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC27.9■■■□□ 2.06
Rnf20Q5DTM8 AC122428.3-201ENSMUST00000215551 2290 ntBASIC27.9■■■□□ 2.06
Rnf20Q5DTM8 Gm37847-201ENSMUST00000192163 1497 ntBASIC27.89■■■□□ 2.06
Rnf20Q5DTM8 Gm31748-201ENSMUST00000194938 1497 ntBASIC27.89■■■□□ 2.06
Rnf20Q5DTM8 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC27.89■■■□□ 2.05
Rnf20Q5DTM8 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC27.88■■■□□ 2.05
Rnf20Q5DTM8 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC27.88■■■□□ 2.05
Rnf20Q5DTM8 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC27.88■■■□□ 2.05
Rnf20Q5DTM8 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC27.87■■■□□ 2.05
Rnf20Q5DTM8 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC27.87■■■□□ 2.05
Rnf20Q5DTM8 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC27.87■■■□□ 2.05
Rnf20Q5DTM8 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC27.87■■■□□ 2.05
Rnf20Q5DTM8 Particl-201ENSMUST00000205370 1560 ntBASIC27.86■■■□□ 2.05
Rnf20Q5DTM8 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC27.86■■■□□ 2.05
Rnf20Q5DTM8 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC27.86■■■□□ 2.05
Rnf20Q5DTM8 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC27.86■■■□□ 2.05
Rnf20Q5DTM8 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC27.86■■■□□ 2.05
Rnf20Q5DTM8 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC27.85■■■□□ 2.05
Rnf20Q5DTM8 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC27.85■■■□□ 2.05
Rnf20Q5DTM8 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC27.84■■■□□ 2.05
Rnf20Q5DTM8 Gm6821-201ENSMUST00000107540 542 ntBASIC27.84■■■□□ 2.05
Rnf20Q5DTM8 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC27.84■■■□□ 2.05
Rnf20Q5DTM8 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC27.83■■■□□ 2.05
Rnf20Q5DTM8 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC27.82■■■□□ 2.04
Rnf20Q5DTM8 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC27.82■■■□□ 2.04
Rnf20Q5DTM8 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC27.82■■■□□ 2.04
Rnf20Q5DTM8 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC27.81■■■□□ 2.04
Rnf20Q5DTM8 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC27.81■■■□□ 2.04
Rnf20Q5DTM8 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC27.8■■■□□ 2.04
Rnf20Q5DTM8 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC27.8■■■□□ 2.04
Rnf20Q5DTM8 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC27.79■■■□□ 2.04
Rnf20Q5DTM8 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC27.79■■■□□ 2.04
Rnf20Q5DTM8 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC27.79■■■□□ 2.04
Rnf20Q5DTM8 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC27.79■■■□□ 2.04
Rnf20Q5DTM8 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC27.79■■■□□ 2.04
Rnf20Q5DTM8 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC27.79■■■□□ 2.04
Rnf20Q5DTM8 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC27.78■■■□□ 2.04
Rnf20Q5DTM8 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC27.77■■■□□ 2.04
Rnf20Q5DTM8 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC27.76■■■□□ 2.04
Rnf20Q5DTM8 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC27.76■■■□□ 2.03
Rnf20Q5DTM8 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC27.76■■■□□ 2.03
Rnf20Q5DTM8 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC27.76■■■□□ 2.03
Rnf20Q5DTM8 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC27.76■■■□□ 2.03
Rnf20Q5DTM8 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC27.75■■■□□ 2.03
Rnf20Q5DTM8 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC27.74■■■□□ 2.03
Rnf20Q5DTM8 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC27.74■■■□□ 2.03
Rnf20Q5DTM8 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC27.74■■■□□ 2.03
Rnf20Q5DTM8 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC27.73■■■□□ 2.03
Rnf20Q5DTM8 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC27.72■■■□□ 2.03
Rnf20Q5DTM8 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC27.72■■■□□ 2.03
Retrieved 100 of 76,532 protein–RNA pairs in 36.4 ms