Protein–RNA interactions for Protein: Q52KI8

Srrm1, Serine/arginine repetitive matrix protein 1, mousemouse

Known RBP Predictions only

Length 946 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Srrm1Q52KI8 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC26.87■■□□□ 1.89
Srrm1Q52KI8 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC26.87■■□□□ 1.89
Srrm1Q52KI8 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
Srrm1Q52KI8 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC26.86■■□□□ 1.89
Srrm1Q52KI8 Gm7332-201ENSMUST00000118351 454 ntBASIC26.85■■□□□ 1.89
Srrm1Q52KI8 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC26.85■■□□□ 1.89
Srrm1Q52KI8 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC26.85■■□□□ 1.89
Srrm1Q52KI8 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC26.85■■□□□ 1.89
Srrm1Q52KI8 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC26.84■■□□□ 1.89
Srrm1Q52KI8 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC26.83■■□□□ 1.89
Srrm1Q52KI8 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC26.83■■□□□ 1.89
Srrm1Q52KI8 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC26.83■■□□□ 1.89
Srrm1Q52KI8 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
Srrm1Q52KI8 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC26.81■■□□□ 1.88
Srrm1Q52KI8 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
Srrm1Q52KI8 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
Srrm1Q52KI8 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC26.8■■□□□ 1.88
Srrm1Q52KI8 Gm45364-201ENSMUST00000210883 159 ntBASIC26.8■■□□□ 1.88
Srrm1Q52KI8 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC26.79■■□□□ 1.88
Srrm1Q52KI8 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC26.78■■□□□ 1.88
Srrm1Q52KI8 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC26.78■■□□□ 1.88
Srrm1Q52KI8 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC26.77■■□□□ 1.88
Srrm1Q52KI8 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC26.77■■□□□ 1.88
Srrm1Q52KI8 Mir3960-201ENSMUST00000198213 73 ntBASIC26.77■■□□□ 1.88
Srrm1Q52KI8 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC26.76■■□□□ 1.87
Srrm1Q52KI8 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC26.76■■□□□ 1.87
Srrm1Q52KI8 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC26.75■■□□□ 1.87
Srrm1Q52KI8 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC26.75■■□□□ 1.87
Srrm1Q52KI8 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC26.75■■□□□ 1.87
Srrm1Q52KI8 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC26.74■■□□□ 1.87
Srrm1Q52KI8 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC26.74■■□□□ 1.87
Srrm1Q52KI8 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC26.74■■□□□ 1.87
Srrm1Q52KI8 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC26.73■■□□□ 1.87
Srrm1Q52KI8 AC154454.1-201ENSMUST00000225253 216 ntBASIC26.73■■□□□ 1.87
Srrm1Q52KI8 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC26.73■■□□□ 1.87
Srrm1Q52KI8 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC26.72■■□□□ 1.87
Srrm1Q52KI8 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC26.72■■□□□ 1.87
Srrm1Q52KI8 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
Srrm1Q52KI8 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC26.71■■□□□ 1.87
Srrm1Q52KI8 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC26.71■■□□□ 1.87
Srrm1Q52KI8 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC26.7■■□□□ 1.87
Srrm1Q52KI8 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC26.7■■□□□ 1.86
Srrm1Q52KI8 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC26.69■■□□□ 1.86
Srrm1Q52KI8 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
Srrm1Q52KI8 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC26.69■■□□□ 1.86
Srrm1Q52KI8 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
Srrm1Q52KI8 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC26.68■■□□□ 1.86
Srrm1Q52KI8 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC26.68■■□□□ 1.86
Srrm1Q52KI8 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC26.67■■□□□ 1.86
Srrm1Q52KI8 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
Srrm1Q52KI8 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC26.66■■□□□ 1.86
Srrm1Q52KI8 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC26.65■■□□□ 1.86
Srrm1Q52KI8 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC26.65■■□□□ 1.86
Srrm1Q52KI8 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
Srrm1Q52KI8 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
Srrm1Q52KI8 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC26.63■■□□□ 1.85
Srrm1Q52KI8 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
Srrm1Q52KI8 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC26.62■■□□□ 1.85
Srrm1Q52KI8 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
Srrm1Q52KI8 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
Srrm1Q52KI8 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC26.61■■□□□ 1.85
Srrm1Q52KI8 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
Srrm1Q52KI8 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC26.61■■□□□ 1.85
Srrm1Q52KI8 Gm15039-201ENSMUST00000118914 875 ntBASIC26.6■■□□□ 1.85
Srrm1Q52KI8 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
Srrm1Q52KI8 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC26.59■■□□□ 1.85
Srrm1Q52KI8 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
Srrm1Q52KI8 Gm14523-201ENSMUST00000117260 558 ntBASIC26.58■■□□□ 1.85
Srrm1Q52KI8 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC26.58■■□□□ 1.85
Srrm1Q52KI8 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
Srrm1Q52KI8 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
Srrm1Q52KI8 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC26.57■■□□□ 1.84
Srrm1Q52KI8 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC26.56■■□□□ 1.84
Srrm1Q52KI8 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC26.56■■□□□ 1.84
Srrm1Q52KI8 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC26.56■■□□□ 1.84
Srrm1Q52KI8 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC26.56■■□□□ 1.84
Srrm1Q52KI8 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC26.55■■□□□ 1.84
Srrm1Q52KI8 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
Srrm1Q52KI8 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC26.54■■□□□ 1.84
Srrm1Q52KI8 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC26.53■■□□□ 1.84
Srrm1Q52KI8 AC153504.1-201ENSMUST00000218379 2290 ntBASIC26.53■■□□□ 1.84
Srrm1Q52KI8 Gm37136-201ENSMUST00000194368 194 ntBASIC26.53■■□□□ 1.84
Srrm1Q52KI8 AC151971.4-201ENSMUST00000214717 704 ntBASIC26.53■■□□□ 1.84
Srrm1Q52KI8 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
Srrm1Q52KI8 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
Srrm1Q52KI8 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC26.53■■□□□ 1.84
Srrm1Q52KI8 Gm22567-201ENSMUST00000175542 342 ntBASIC26.51■■□□□ 1.83
Srrm1Q52KI8 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC26.51■■□□□ 1.83
Srrm1Q52KI8 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC26.51■■□□□ 1.83
Srrm1Q52KI8 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
Srrm1Q52KI8 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC26.49■■□□□ 1.83
Srrm1Q52KI8 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
Srrm1Q52KI8 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC26.49■■□□□ 1.83
Srrm1Q52KI8 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC26.48■■□□□ 1.83
Srrm1Q52KI8 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
Srrm1Q52KI8 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
Srrm1Q52KI8 Gm13889-201ENSMUST00000099689 1386 ntBASIC26.47■■□□□ 1.83
Srrm1Q52KI8 Gm5067-201ENSMUST00000170449 1009 ntBASIC26.47■■□□□ 1.83
Srrm1Q52KI8 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC26.46■■□□□ 1.83
Srrm1Q52KI8 Gm9905-201ENSMUST00000065740 1845 ntBASIC26.46■■□□□ 1.83
Retrieved 100 of 76,532 protein–RNA pairs in 7.1 ms