Protein–RNA interactions for Protein: Q4VBF2

R3hdm4, R3H domain-containing protein 4, mousemouse

Predictions only

Length 262 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
R3hdm4Q4VBF2 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC25.69■■□□□ 1.7
R3hdm4Q4VBF2 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC25.68■■□□□ 1.7
R3hdm4Q4VBF2 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC25.68■■□□□ 1.7
R3hdm4Q4VBF2 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
R3hdm4Q4VBF2 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC25.67■■□□□ 1.7
R3hdm4Q4VBF2 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC25.67■■□□□ 1.7
R3hdm4Q4VBF2 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC25.67■■□□□ 1.7
R3hdm4Q4VBF2 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
R3hdm4Q4VBF2 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC25.65■■□□□ 1.7
R3hdm4Q4VBF2 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC25.64■■□□□ 1.7
R3hdm4Q4VBF2 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC25.64■■□□□ 1.7
R3hdm4Q4VBF2 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.7
R3hdm4Q4VBF2 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
R3hdm4Q4VBF2 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC25.62■■□□□ 1.69
R3hdm4Q4VBF2 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC25.62■■□□□ 1.69
R3hdm4Q4VBF2 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC25.62■■□□□ 1.69
R3hdm4Q4VBF2 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC25.62■■□□□ 1.69
R3hdm4Q4VBF2 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
R3hdm4Q4VBF2 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC25.61■■□□□ 1.69
R3hdm4Q4VBF2 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
R3hdm4Q4VBF2 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
R3hdm4Q4VBF2 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC25.6■■□□□ 1.69
R3hdm4Q4VBF2 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC25.59■■□□□ 1.69
R3hdm4Q4VBF2 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC25.58■■□□□ 1.69
R3hdm4Q4VBF2 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
R3hdm4Q4VBF2 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
R3hdm4Q4VBF2 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC25.57■■□□□ 1.68
R3hdm4Q4VBF2 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
R3hdm4Q4VBF2 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
R3hdm4Q4VBF2 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
R3hdm4Q4VBF2 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC25.54■■□□□ 1.68
R3hdm4Q4VBF2 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
R3hdm4Q4VBF2 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC25.53■■□□□ 1.68
R3hdm4Q4VBF2 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC25.53■■□□□ 1.68
R3hdm4Q4VBF2 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
R3hdm4Q4VBF2 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC25.53■■□□□ 1.68
R3hdm4Q4VBF2 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC25.53■■□□□ 1.68
R3hdm4Q4VBF2 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
R3hdm4Q4VBF2 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
R3hdm4Q4VBF2 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC25.51■■□□□ 1.67
R3hdm4Q4VBF2 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC25.51■■□□□ 1.67
R3hdm4Q4VBF2 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC25.51■■□□□ 1.67
R3hdm4Q4VBF2 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
R3hdm4Q4VBF2 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC25.5■■□□□ 1.67
R3hdm4Q4VBF2 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC25.5■■□□□ 1.67
R3hdm4Q4VBF2 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC25.49■■□□□ 1.67
R3hdm4Q4VBF2 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC25.49■■□□□ 1.67
R3hdm4Q4VBF2 Particl-201ENSMUST00000205370 1560 ntBASIC25.49■■□□□ 1.67
R3hdm4Q4VBF2 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
R3hdm4Q4VBF2 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC25.49■■□□□ 1.67
R3hdm4Q4VBF2 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC25.48■■□□□ 1.67
R3hdm4Q4VBF2 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC25.48■■□□□ 1.67
R3hdm4Q4VBF2 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC25.47■■□□□ 1.67
R3hdm4Q4VBF2 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC25.47■■□□□ 1.67
R3hdm4Q4VBF2 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC25.46■■□□□ 1.67
R3hdm4Q4VBF2 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.67
R3hdm4Q4VBF2 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC25.45■■□□□ 1.66
R3hdm4Q4VBF2 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC25.45■■□□□ 1.66
R3hdm4Q4VBF2 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC25.45■■□□□ 1.66
R3hdm4Q4VBF2 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
R3hdm4Q4VBF2 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
R3hdm4Q4VBF2 Gm7432-201ENSMUST00000210343 879 ntBASIC25.44■■□□□ 1.66
R3hdm4Q4VBF2 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC25.44■■□□□ 1.66
R3hdm4Q4VBF2 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC25.43■■□□□ 1.66
R3hdm4Q4VBF2 Gm37847-201ENSMUST00000192163 1497 ntBASIC25.43■■□□□ 1.66
R3hdm4Q4VBF2 Gm31748-201ENSMUST00000194938 1497 ntBASIC25.43■■□□□ 1.66
R3hdm4Q4VBF2 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC25.43■■□□□ 1.66
R3hdm4Q4VBF2 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC25.43■■□□□ 1.66
R3hdm4Q4VBF2 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC25.42■■□□□ 1.66
R3hdm4Q4VBF2 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC25.41■■□□□ 1.66
R3hdm4Q4VBF2 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC25.41■■□□□ 1.66
R3hdm4Q4VBF2 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC25.41■■□□□ 1.66
R3hdm4Q4VBF2 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
R3hdm4Q4VBF2 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
R3hdm4Q4VBF2 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC25.4■■□□□ 1.66
R3hdm4Q4VBF2 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
R3hdm4Q4VBF2 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC25.4■■□□□ 1.66
R3hdm4Q4VBF2 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC25.4■■□□□ 1.66
R3hdm4Q4VBF2 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC25.4■■□□□ 1.66
R3hdm4Q4VBF2 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC25.39■■□□□ 1.66
R3hdm4Q4VBF2 AC131739.1-201ENSMUST00000221692 1245 ntBASIC25.39■■□□□ 1.66
R3hdm4Q4VBF2 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.65
R3hdm4Q4VBF2 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC25.38■■□□□ 1.65
R3hdm4Q4VBF2 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
R3hdm4Q4VBF2 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
R3hdm4Q4VBF2 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
R3hdm4Q4VBF2 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC25.37■■□□□ 1.65
R3hdm4Q4VBF2 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC25.36■■□□□ 1.65
R3hdm4Q4VBF2 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC25.36■■□□□ 1.65
R3hdm4Q4VBF2 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC25.36■■□□□ 1.65
R3hdm4Q4VBF2 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC25.35■■□□□ 1.65
R3hdm4Q4VBF2 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC25.35■■□□□ 1.65
R3hdm4Q4VBF2 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC25.35■■□□□ 1.65
R3hdm4Q4VBF2 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC25.35■■□□□ 1.65
R3hdm4Q4VBF2 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC25.35■■□□□ 1.65
R3hdm4Q4VBF2 Gm11599-201ENSMUST00000118720 878 ntBASIC25.34■■□□□ 1.65
R3hdm4Q4VBF2 Gm37136-201ENSMUST00000194368 194 ntBASIC25.34■■□□□ 1.65
R3hdm4Q4VBF2 AC122428.3-201ENSMUST00000215551 2290 ntBASIC25.34■■□□□ 1.65
R3hdm4Q4VBF2 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC25.33■■□□□ 1.65
R3hdm4Q4VBF2 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC25.33■■□□□ 1.65
Retrieved 100 of 76,532 protein–RNA pairs in 29.3 ms