Protein–RNA interactions for Protein: Q49MI3

CERKL, Ceramide kinase-like protein, humanhuman

Predicted RBP Predictions only

Length 558 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CERKLQ49MI3 SRP68-213ENST00000629930 165 ntTSL 5 BASIC30.39■■■□□ 2.46
CERKLQ49MI3 BRD4-212ENST00000630599 726 ntTSL 2 BASIC30.39■■■□□ 2.46
CERKLQ49MI3 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC30.39■■■□□ 2.46
CERKLQ49MI3 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC30.38■■■□□ 2.45
CERKLQ49MI3 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC30.38■■■□□ 2.45
CERKLQ49MI3 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC30.38■■■□□ 2.45
CERKLQ49MI3 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC30.38■■■□□ 2.45
CERKLQ49MI3 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC30.38■■■□□ 2.45
CERKLQ49MI3 POU3F1-201ENST00000373012 2184 ntAPPRIS P1 BASIC30.37■■■□□ 2.45
CERKLQ49MI3 GAL3ST1-205ENST00000406361 1819 ntAPPRIS P1 TSL 2 BASIC30.37■■■□□ 2.45
CERKLQ49MI3 ZNF787-203ENST00000610935 1925 ntAPPRIS P1 TSL 1 (best) BASIC30.36■■■□□ 2.45
CERKLQ49MI3 TM6SF1-202ENST00000322019 2074 ntAPPRIS P1 TSL 1 (best) BASIC30.36■■■□□ 2.45
CERKLQ49MI3 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC30.36■■■□□ 2.45
CERKLQ49MI3 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC30.35■■■□□ 2.45
CERKLQ49MI3 SLC52A2-201ENST00000329994 1896 ntAPPRIS P1 TSL 1 (best) BASIC30.34■■■□□ 2.45
CERKLQ49MI3 PHF23-201ENST00000320316 2037 ntAPPRIS P1 TSL 1 (best) BASIC30.33■■■□□ 2.45
CERKLQ49MI3 CAPNS1-201ENST00000246533 1918 ntAPPRIS P2 TSL 1 (best) BASIC30.33■■■□□ 2.45
CERKLQ49MI3 ST7-AS1-201ENST00000456775 1889 ntBASIC30.33■■■□□ 2.45
CERKLQ49MI3 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC30.32■■■□□ 2.44
CERKLQ49MI3 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC30.32■■■□□ 2.44
CERKLQ49MI3 SLC16A11-201ENST00000308009 1803 ntAPPRIS P2 TSL 1 (best) BASIC30.31■■■□□ 2.44
CERKLQ49MI3 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC30.31■■■□□ 2.44
CERKLQ49MI3 ARL8A-201ENST00000272217 1793 ntAPPRIS P1 TSL 1 (best) BASIC30.31■■■□□ 2.44
CERKLQ49MI3 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC30.3■■■□□ 2.44
CERKLQ49MI3 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC30.3■■■□□ 2.44
CERKLQ49MI3 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC30.3■■■□□ 2.44
CERKLQ49MI3 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC30.29■■■□□ 2.44
CERKLQ49MI3 AC110285.7-201ENST00000624417 1536 ntBASIC30.29■■■□□ 2.44
CERKLQ49MI3 AC008813.1-201ENST00000536597 885 ntBASIC30.29■■■□□ 2.44
CERKLQ49MI3 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC30.29■■■□□ 2.44
CERKLQ49MI3 RAMP2-AS1-202ENST00000589716 1985 ntTSL 5 BASIC30.28■■■□□ 2.44
CERKLQ49MI3 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC30.28■■■□□ 2.44
CERKLQ49MI3 TPT1-202ENST00000379055 948 ntTSL 2 BASIC30.28■■■□□ 2.44
CERKLQ49MI3 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC30.28■■■□□ 2.44
CERKLQ49MI3 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC30.28■■■□□ 2.44
CERKLQ49MI3 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC30.27■■■□□ 2.44
CERKLQ49MI3 BCL7C-201ENST00000215115 1740 ntAPPRIS P1 TSL 1 (best) BASIC30.27■■■□□ 2.44
CERKLQ49MI3 LFNG-201ENST00000222725 2377 ntAPPRIS P4 TSL 5 BASIC30.26■■■□□ 2.43
CERKLQ49MI3 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC30.26■■■□□ 2.43
CERKLQ49MI3 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC30.25■■■□□ 2.43
CERKLQ49MI3 IRX1-201ENST00000302006 1858 ntAPPRIS P1 TSL 1 (best) BASIC30.25■■■□□ 2.43
CERKLQ49MI3 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC30.25■■■□□ 2.43
CERKLQ49MI3 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC30.25■■■□□ 2.43
CERKLQ49MI3 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC30.25■■■□□ 2.43
CERKLQ49MI3 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC30.24■■■□□ 2.43
CERKLQ49MI3 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC30.24■■■□□ 2.43
CERKLQ49MI3 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC30.24■■■□□ 2.43
CERKLQ49MI3 SHOX2-204ENST00000483851 1866 ntAPPRIS ALT2 TSL 2 BASIC30.24■■■□□ 2.43
CERKLQ49MI3 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC30.24■■■□□ 2.43
CERKLQ49MI3 CBLN1-201ENST00000219197 2435 ntAPPRIS P1 TSL 1 (best) BASIC30.24■■■□□ 2.43
CERKLQ49MI3 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC30.23■■■□□ 2.43
CERKLQ49MI3 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC30.22■■■□□ 2.43
CERKLQ49MI3 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC30.22■■■□□ 2.43
CERKLQ49MI3 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC30.22■■■□□ 2.43
CERKLQ49MI3 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC30.22■■■□□ 2.43
CERKLQ49MI3 COL13A1-210ENST00000517713 2007 ntAPPRIS ALT2 TSL 5 BASIC30.22■■■□□ 2.43
CERKLQ49MI3 GNAI2-202ENST00000313601 2464 ntAPPRIS P1 TSL 1 (best) BASIC30.21■■■□□ 2.43
CERKLQ49MI3 GPX1-201ENST00000419349 1106 ntBASIC30.21■■■□□ 2.43
CERKLQ49MI3 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC30.21■■■□□ 2.43
CERKLQ49MI3 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC30.21■■■□□ 2.43
CERKLQ49MI3 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC30.21■■■□□ 2.43
CERKLQ49MI3 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC30.21■■■□□ 2.43
CERKLQ49MI3 ZNF513-201ENST00000323703 2139 ntAPPRIS P1 TSL 1 (best) BASIC30.2■■■□□ 2.43
CERKLQ49MI3 MEST-211ENST00000437945 1455 ntTSL 5 BASIC30.2■■■□□ 2.43
CERKLQ49MI3 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC30.2■■■□□ 2.43
CERKLQ49MI3 IFNGR2-201ENST00000290219 2221 ntAPPRIS P3 TSL 1 (best) BASIC30.19■■■□□ 2.42
CERKLQ49MI3 TSPAN33-201ENST00000486685 1863 ntAPPRIS P1 TSL 1 (best) BASIC30.19■■■□□ 2.42
CERKLQ49MI3 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC30.19■■■□□ 2.42
CERKLQ49MI3 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC30.19■■■□□ 2.42
CERKLQ49MI3 TPM2-203ENST00000378292 2147 ntAPPRIS ALT1 TSL 1 (best) BASIC30.18■■■□□ 2.42
CERKLQ49MI3 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC30.18■■■□□ 2.42
CERKLQ49MI3 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC30.18■■■□□ 2.42
CERKLQ49MI3 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC30.18■■■□□ 2.42
CERKLQ49MI3 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC30.18■■■□□ 2.42
CERKLQ49MI3 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC30.18■■■□□ 2.42
CERKLQ49MI3 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC30.18■■■□□ 2.42
CERKLQ49MI3 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC30.17■■■□□ 2.42
CERKLQ49MI3 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC30.17■■■□□ 2.42
CERKLQ49MI3 CEP120-209ENST00000515110 606 ntTSL 3 BASIC30.17■■■□□ 2.42
CERKLQ49MI3 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC30.16■■■□□ 2.42
CERKLQ49MI3 TNK2-201ENST00000333602 5270 ntAPPRIS P1 TSL 1 (best) BASIC30.16■■■□□ 2.42
CERKLQ49MI3 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC30.16■■■□□ 2.42
CERKLQ49MI3 CHST11-203ENST00000547956 936 ntTSL 2 BASIC30.16■■■□□ 2.42
CERKLQ49MI3 YAP1-204ENST00000526343 2393 ntTSL 5 BASIC30.15■■■□□ 2.42
CERKLQ49MI3 TPRG1L-202ENST00000378344 2414 ntAPPRIS P1 TSL 2 BASIC30.15■■■□□ 2.42
CERKLQ49MI3 FTCD-204ENST00000397748 1955 ntTSL 1 (best) BASIC30.14■■■□□ 2.42
CERKLQ49MI3 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC30.14■■■□□ 2.42
CERKLQ49MI3 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC30.14■■■□□ 2.42
CERKLQ49MI3 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC30.14■■■□□ 2.42
CERKLQ49MI3 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC30.14■■■□□ 2.41
CERKLQ49MI3 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC30.13■■■□□ 2.41
CERKLQ49MI3 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC30.13■■■□□ 2.41
CERKLQ49MI3 PEX7-203ENST00000541292 945 ntTSL 5 BASIC30.13■■■□□ 2.41
CERKLQ49MI3 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC30.13■■■□□ 2.41
CERKLQ49MI3 EFNA1-202ENST00000368407 1926 ntAPPRIS P1 TSL 1 (best) BASIC30.12■■■□□ 2.41
CERKLQ49MI3 RARRES2P2-201ENST00000394842 485 ntBASIC30.12■■■□□ 2.41
CERKLQ49MI3 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC30.12■■■□□ 2.41
CERKLQ49MI3 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC30.12■■■□□ 2.41
CERKLQ49MI3 ACOT7-201ENST00000361521 2429 ntAPPRIS ALT2 TSL 1 (best) BASIC30.11■■■□□ 2.41
CERKLQ49MI3 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC30.11■■■□□ 2.41
Retrieved 100 of 98,524 protein–RNA pairs in 51.3 ms