Protein–RNA interactions for Protein: Q3UTQ8

Cdkl5, Cyclin-dependent kinase-like 5, mousemouse

Predictions only

Length 938 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdkl5Q3UTQ8 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC27.39■■□□□ 1.97
Cdkl5Q3UTQ8 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC27.38■■□□□ 1.97
Cdkl5Q3UTQ8 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC27.38■■□□□ 1.97
Cdkl5Q3UTQ8 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC27.38■■□□□ 1.97
Cdkl5Q3UTQ8 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC27.37■■□□□ 1.97
Cdkl5Q3UTQ8 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC27.37■■□□□ 1.97
Cdkl5Q3UTQ8 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC27.36■■□□□ 1.97
Cdkl5Q3UTQ8 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC27.36■■□□□ 1.97
Cdkl5Q3UTQ8 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC27.36■■□□□ 1.97
Cdkl5Q3UTQ8 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC27.36■■□□□ 1.97
Cdkl5Q3UTQ8 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC27.35■■□□□ 1.97
Cdkl5Q3UTQ8 Gm9939-201ENSMUST00000067161 1154 ntBASIC27.34■■□□□ 1.97
Cdkl5Q3UTQ8 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC27.33■■□□□ 1.97
Cdkl5Q3UTQ8 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC27.33■■□□□ 1.97
Cdkl5Q3UTQ8 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC27.33■■□□□ 1.97
Cdkl5Q3UTQ8 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC27.32■■□□□ 1.96
Cdkl5Q3UTQ8 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC27.32■■□□□ 1.96
Cdkl5Q3UTQ8 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC27.32■■□□□ 1.96
Cdkl5Q3UTQ8 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC27.32■■□□□ 1.96
Cdkl5Q3UTQ8 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC27.31■■□□□ 1.96
Cdkl5Q3UTQ8 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC27.31■■□□□ 1.96
Cdkl5Q3UTQ8 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
Cdkl5Q3UTQ8 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC27.3■■□□□ 1.96
Cdkl5Q3UTQ8 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC27.3■■□□□ 1.96
Cdkl5Q3UTQ8 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC27.28■■□□□ 1.96
Cdkl5Q3UTQ8 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
Cdkl5Q3UTQ8 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
Cdkl5Q3UTQ8 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC27.28■■□□□ 1.96
Cdkl5Q3UTQ8 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC27.27■■□□□ 1.96
Cdkl5Q3UTQ8 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
Cdkl5Q3UTQ8 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC27.26■■□□□ 1.96
Cdkl5Q3UTQ8 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC27.26■■□□□ 1.95
Cdkl5Q3UTQ8 Gm6821-201ENSMUST00000107540 542 ntBASIC27.25■■□□□ 1.95
Cdkl5Q3UTQ8 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC27.25■■□□□ 1.95
Cdkl5Q3UTQ8 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC27.25■■□□□ 1.95
Cdkl5Q3UTQ8 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC27.25■■□□□ 1.95
Cdkl5Q3UTQ8 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC27.25■■□□□ 1.95
Cdkl5Q3UTQ8 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC27.24■■□□□ 1.95
Cdkl5Q3UTQ8 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC27.24■■□□□ 1.95
Cdkl5Q3UTQ8 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC27.22■■□□□ 1.95
Cdkl5Q3UTQ8 Gm37847-201ENSMUST00000192163 1497 ntBASIC27.21■■□□□ 1.95
Cdkl5Q3UTQ8 Gm31748-201ENSMUST00000194938 1497 ntBASIC27.21■■□□□ 1.95
Cdkl5Q3UTQ8 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC27.21■■□□□ 1.95
Cdkl5Q3UTQ8 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC27.21■■□□□ 1.95
Cdkl5Q3UTQ8 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC27.2■■□□□ 1.94
Cdkl5Q3UTQ8 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC27.19■■□□□ 1.94
Cdkl5Q3UTQ8 Particl-201ENSMUST00000205370 1560 ntBASIC27.18■■□□□ 1.94
Cdkl5Q3UTQ8 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC27.18■■□□□ 1.94
Cdkl5Q3UTQ8 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC27.18■■□□□ 1.94
Cdkl5Q3UTQ8 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC27.18■■□□□ 1.94
Cdkl5Q3UTQ8 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC27.18■■□□□ 1.94
Cdkl5Q3UTQ8 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC27.17■■□□□ 1.94
Cdkl5Q3UTQ8 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC27.17■■□□□ 1.94
Cdkl5Q3UTQ8 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC27.16■■□□□ 1.94
Cdkl5Q3UTQ8 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC27.15■■□□□ 1.94
Cdkl5Q3UTQ8 AC122428.3-201ENSMUST00000215551 2290 ntBASIC27.15■■□□□ 1.94
Cdkl5Q3UTQ8 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC27.15■■□□□ 1.94
Cdkl5Q3UTQ8 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC27.15■■□□□ 1.94
Cdkl5Q3UTQ8 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC27.14■■□□□ 1.94
Cdkl5Q3UTQ8 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC27.14■■□□□ 1.94
Cdkl5Q3UTQ8 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC27.14■■□□□ 1.94
Cdkl5Q3UTQ8 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC27.14■■□□□ 1.93
Cdkl5Q3UTQ8 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC27.14■■□□□ 1.93
Cdkl5Q3UTQ8 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC27.13■■□□□ 1.93
Cdkl5Q3UTQ8 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC27.13■■□□□ 1.93
Cdkl5Q3UTQ8 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC27.12■■□□□ 1.93
Cdkl5Q3UTQ8 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC27.12■■□□□ 1.93
Cdkl5Q3UTQ8 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC27.12■■□□□ 1.93
Cdkl5Q3UTQ8 Gm8503-201ENSMUST00000118131 455 ntBASIC27.12■■□□□ 1.93
Cdkl5Q3UTQ8 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC27.12■■□□□ 1.93
Cdkl5Q3UTQ8 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC27.12■■□□□ 1.93
Cdkl5Q3UTQ8 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC27.11■■□□□ 1.93
Cdkl5Q3UTQ8 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC27.11■■□□□ 1.93
Cdkl5Q3UTQ8 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC27.11■■□□□ 1.93
Cdkl5Q3UTQ8 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC27.11■■□□□ 1.93
Cdkl5Q3UTQ8 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC27.1■■□□□ 1.93
Cdkl5Q3UTQ8 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC27.1■■□□□ 1.93
Cdkl5Q3UTQ8 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC27.1■■□□□ 1.93
Cdkl5Q3UTQ8 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC27.1■■□□□ 1.93
Cdkl5Q3UTQ8 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC27.1■■□□□ 1.93
Cdkl5Q3UTQ8 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC27.09■■□□□ 1.93
Cdkl5Q3UTQ8 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC27.09■■□□□ 1.93
Cdkl5Q3UTQ8 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC27.09■■□□□ 1.93
Cdkl5Q3UTQ8 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC27.09■■□□□ 1.93
Cdkl5Q3UTQ8 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC27.08■■□□□ 1.93
Cdkl5Q3UTQ8 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC27.08■■□□□ 1.93
Cdkl5Q3UTQ8 AC153890.1-201ENSMUST00000220021 2469 ntBASIC27.08■■□□□ 1.93
Cdkl5Q3UTQ8 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC27.07■■□□□ 1.92
Cdkl5Q3UTQ8 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC27.07■■□□□ 1.92
Cdkl5Q3UTQ8 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC27.07■■□□□ 1.92
Cdkl5Q3UTQ8 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC27.06■■□□□ 1.92
Cdkl5Q3UTQ8 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC27.05■■□□□ 1.92
Cdkl5Q3UTQ8 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC27.05■■□□□ 1.92
Cdkl5Q3UTQ8 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC27.04■■□□□ 1.92
Cdkl5Q3UTQ8 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC27.04■■□□□ 1.92
Cdkl5Q3UTQ8 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC27.03■■□□□ 1.92
Cdkl5Q3UTQ8 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC27.03■■□□□ 1.92
Cdkl5Q3UTQ8 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC27.02■■□□□ 1.92
Cdkl5Q3UTQ8 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC27.02■■□□□ 1.92
Cdkl5Q3UTQ8 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC27.02■■□□□ 1.92
Retrieved 100 of 76,532 protein–RNA pairs in 100.3 ms