Protein–RNA interactions for Protein: Q3US60

BC025920, MCG148085, mousemouse

Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BC025920Q3US60 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
BC025920Q3US60 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
BC025920Q3US60 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
BC025920Q3US60 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC16.55■□□□□ 0.24
BC025920Q3US60 Gm17641-201ENSMUST00000166328 2350 ntBASIC16.55■□□□□ 0.24
BC025920Q3US60 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
BC025920Q3US60 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
BC025920Q3US60 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
BC025920Q3US60 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
BC025920Q3US60 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
BC025920Q3US60 Gm26115-201ENSMUST00000175605 87 ntBASIC16.52■□□□□ 0.24
BC025920Q3US60 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC16.52■□□□□ 0.24
BC025920Q3US60 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.23
BC025920Q3US60 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC16.51■□□□□ 0.23
BC025920Q3US60 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
BC025920Q3US60 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
BC025920Q3US60 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
BC025920Q3US60 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
BC025920Q3US60 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
BC025920Q3US60 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
BC025920Q3US60 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
BC025920Q3US60 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
BC025920Q3US60 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC16.49■□□□□ 0.23
BC025920Q3US60 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
BC025920Q3US60 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
BC025920Q3US60 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
BC025920Q3US60 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
BC025920Q3US60 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
BC025920Q3US60 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
BC025920Q3US60 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
BC025920Q3US60 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
BC025920Q3US60 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
BC025920Q3US60 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
BC025920Q3US60 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC16.47■□□□□ 0.23
BC025920Q3US60 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC16.46■□□□□ 0.23
BC025920Q3US60 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
BC025920Q3US60 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
BC025920Q3US60 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
BC025920Q3US60 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.22
BC025920Q3US60 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
BC025920Q3US60 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
BC025920Q3US60 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
BC025920Q3US60 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
BC025920Q3US60 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
BC025920Q3US60 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
BC025920Q3US60 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
BC025920Q3US60 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
BC025920Q3US60 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
BC025920Q3US60 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
BC025920Q3US60 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC16.43■□□□□ 0.22
BC025920Q3US60 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
BC025920Q3US60 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
BC025920Q3US60 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
BC025920Q3US60 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
BC025920Q3US60 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC16.43■□□□□ 0.22
BC025920Q3US60 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
BC025920Q3US60 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
BC025920Q3US60 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
BC025920Q3US60 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
BC025920Q3US60 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
BC025920Q3US60 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
BC025920Q3US60 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
BC025920Q3US60 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
BC025920Q3US60 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
BC025920Q3US60 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC16.4■□□□□ 0.22
BC025920Q3US60 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
BC025920Q3US60 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
BC025920Q3US60 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
BC025920Q3US60 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
BC025920Q3US60 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
BC025920Q3US60 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
BC025920Q3US60 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
BC025920Q3US60 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
BC025920Q3US60 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
BC025920Q3US60 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
BC025920Q3US60 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC16.37■□□□□ 0.21
BC025920Q3US60 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
BC025920Q3US60 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
BC025920Q3US60 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC16.37■□□□□ 0.21
BC025920Q3US60 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
BC025920Q3US60 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
BC025920Q3US60 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC16.36■□□□□ 0.21
BC025920Q3US60 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
BC025920Q3US60 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
BC025920Q3US60 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC16.36■□□□□ 0.21
BC025920Q3US60 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
BC025920Q3US60 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
BC025920Q3US60 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
BC025920Q3US60 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
BC025920Q3US60 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
BC025920Q3US60 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
BC025920Q3US60 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
BC025920Q3US60 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
BC025920Q3US60 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
BC025920Q3US60 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
BC025920Q3US60 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
BC025920Q3US60 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
BC025920Q3US60 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
BC025920Q3US60 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
BC025920Q3US60 Gm42699-201ENSMUST00000198104 1657 ntBASIC16.32■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 12.1 ms