Protein–RNA interactions for Protein: Q3UHC2

Lrrk1, Leucine-rich repeat serine/threonine-protein kinase 1, mousemouse

Predictions only

Length 2,014 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lrrk1Q3UHC2 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Lrrk1Q3UHC2 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
Lrrk1Q3UHC2 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC22.17■■□□□ 1.14
Lrrk1Q3UHC2 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Lrrk1Q3UHC2 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC22.16■■□□□ 1.14
Lrrk1Q3UHC2 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
Lrrk1Q3UHC2 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC22.16■■□□□ 1.14
Lrrk1Q3UHC2 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC22.16■■□□□ 1.14
Lrrk1Q3UHC2 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
Lrrk1Q3UHC2 Gm7432-201ENSMUST00000210343 879 ntBASIC22.15■■□□□ 1.14
Lrrk1Q3UHC2 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Lrrk1Q3UHC2 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Lrrk1Q3UHC2 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Lrrk1Q3UHC2 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Lrrk1Q3UHC2 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
Lrrk1Q3UHC2 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC22.13■■□□□ 1.13
Lrrk1Q3UHC2 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
Lrrk1Q3UHC2 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC22.13■■□□□ 1.13
Lrrk1Q3UHC2 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
Lrrk1Q3UHC2 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Lrrk1Q3UHC2 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC22.11■■□□□ 1.13
Lrrk1Q3UHC2 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Lrrk1Q3UHC2 Particl-201ENSMUST00000205370 1560 ntBASIC22.1■■□□□ 1.13
Lrrk1Q3UHC2 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
Lrrk1Q3UHC2 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
Lrrk1Q3UHC2 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC22.1■■□□□ 1.13
Lrrk1Q3UHC2 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Lrrk1Q3UHC2 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
Lrrk1Q3UHC2 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
Lrrk1Q3UHC2 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Lrrk1Q3UHC2 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
Lrrk1Q3UHC2 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
Lrrk1Q3UHC2 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC22.08■■□□□ 1.13
Lrrk1Q3UHC2 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Lrrk1Q3UHC2 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
Lrrk1Q3UHC2 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Lrrk1Q3UHC2 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC22.06■■□□□ 1.12
Lrrk1Q3UHC2 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
Lrrk1Q3UHC2 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC22.06■■□□□ 1.12
Lrrk1Q3UHC2 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC22.06■■□□□ 1.12
Lrrk1Q3UHC2 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
Lrrk1Q3UHC2 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
Lrrk1Q3UHC2 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Lrrk1Q3UHC2 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Lrrk1Q3UHC2 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Lrrk1Q3UHC2 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
Lrrk1Q3UHC2 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC22.02■■□□□ 1.12
Lrrk1Q3UHC2 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
Lrrk1Q3UHC2 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC22.02■■□□□ 1.12
Lrrk1Q3UHC2 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC22.02■■□□□ 1.12
Lrrk1Q3UHC2 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Lrrk1Q3UHC2 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
Lrrk1Q3UHC2 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC22.01■■□□□ 1.11
Lrrk1Q3UHC2 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
Lrrk1Q3UHC2 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC22■■□□□ 1.11
Lrrk1Q3UHC2 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC22■■□□□ 1.11
Lrrk1Q3UHC2 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Lrrk1Q3UHC2 Gm11599-201ENSMUST00000118720 878 ntBASIC21.99■■□□□ 1.11
Lrrk1Q3UHC2 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC21.99■■□□□ 1.11
Lrrk1Q3UHC2 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
Lrrk1Q3UHC2 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Lrrk1Q3UHC2 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Lrrk1Q3UHC2 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC21.97■■□□□ 1.11
Lrrk1Q3UHC2 AC131739.1-201ENSMUST00000221692 1245 ntBASIC21.97■■□□□ 1.11
Lrrk1Q3UHC2 Mir6538-201ENSMUST00000183713 110 ntBASIC21.96■■□□□ 1.11
Lrrk1Q3UHC2 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC21.96■■□□□ 1.11
Lrrk1Q3UHC2 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
Lrrk1Q3UHC2 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC21.95■■□□□ 1.11
Lrrk1Q3UHC2 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
Lrrk1Q3UHC2 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
Lrrk1Q3UHC2 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC21.94■■□□□ 1.1
Lrrk1Q3UHC2 Gm14121-201ENSMUST00000121441 1380 ntBASIC21.93■■□□□ 1.1
Lrrk1Q3UHC2 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC21.93■■□□□ 1.1
Lrrk1Q3UHC2 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC21.92■■□□□ 1.1
Lrrk1Q3UHC2 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Lrrk1Q3UHC2 Gm37136-201ENSMUST00000194368 194 ntBASIC21.92■■□□□ 1.1
Lrrk1Q3UHC2 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
Lrrk1Q3UHC2 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC21.91■■□□□ 1.1
Lrrk1Q3UHC2 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Lrrk1Q3UHC2 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
Lrrk1Q3UHC2 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC21.91■■□□□ 1.1
Lrrk1Q3UHC2 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC21.91■■□□□ 1.1
Lrrk1Q3UHC2 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Lrrk1Q3UHC2 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
Lrrk1Q3UHC2 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC21.9■■□□□ 1.1
Lrrk1Q3UHC2 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC21.9■■□□□ 1.1
Lrrk1Q3UHC2 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Lrrk1Q3UHC2 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Lrrk1Q3UHC2 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
Lrrk1Q3UHC2 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC21.9■■□□□ 1.1
Lrrk1Q3UHC2 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Lrrk1Q3UHC2 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
Lrrk1Q3UHC2 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Lrrk1Q3UHC2 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC21.88■■□□□ 1.09
Lrrk1Q3UHC2 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Lrrk1Q3UHC2 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Lrrk1Q3UHC2 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Lrrk1Q3UHC2 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Lrrk1Q3UHC2 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Lrrk1Q3UHC2 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
Retrieved 100 of 76,532 protein–RNA pairs in 41.3 ms