Protein–RNA interactions for Protein: Q3U466

Cln6, Ceroid-lipofuscinosis, neuronal 6, mousemouse

Predictions only

Length 308 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cln6Q3U466 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC19.89■□□□□ 0.77
Cln6Q3U466 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
Cln6Q3U466 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Cln6Q3U466 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC19.87■□□□□ 0.77
Cln6Q3U466 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
Cln6Q3U466 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Cln6Q3U466 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
Cln6Q3U466 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Cln6Q3U466 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Cln6Q3U466 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC19.87■□□□□ 0.77
Cln6Q3U466 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Cln6Q3U466 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Cln6Q3U466 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Cln6Q3U466 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Cln6Q3U466 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Cln6Q3U466 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Cln6Q3U466 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
Cln6Q3U466 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Cln6Q3U466 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Cln6Q3U466 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Cln6Q3U466 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Cln6Q3U466 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Cln6Q3U466 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Cln6Q3U466 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC19.84■□□□□ 0.77
Cln6Q3U466 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.77
Cln6Q3U466 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC19.82■□□□□ 0.76
Cln6Q3U466 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
Cln6Q3U466 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Cln6Q3U466 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
Cln6Q3U466 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Cln6Q3U466 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Cln6Q3U466 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Cln6Q3U466 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC19.8■□□□□ 0.76
Cln6Q3U466 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Cln6Q3U466 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC19.8■□□□□ 0.76
Cln6Q3U466 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Cln6Q3U466 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Cln6Q3U466 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Cln6Q3U466 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
Cln6Q3U466 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Cln6Q3U466 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Cln6Q3U466 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Cln6Q3U466 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Cln6Q3U466 Gm43863-201ENSMUST00000203822 1192 ntBASIC19.78■□□□□ 0.76
Cln6Q3U466 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Cln6Q3U466 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Cln6Q3U466 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
Cln6Q3U466 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Cln6Q3U466 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC19.78■□□□□ 0.76
Cln6Q3U466 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC19.77■□□□□ 0.76
Cln6Q3U466 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Cln6Q3U466 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.75
Cln6Q3U466 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC19.76■□□□□ 0.75
Cln6Q3U466 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
Cln6Q3U466 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
Cln6Q3U466 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC19.76■□□□□ 0.75
Cln6Q3U466 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Cln6Q3U466 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Cln6Q3U466 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Cln6Q3U466 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
Cln6Q3U466 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Cln6Q3U466 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
Cln6Q3U466 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Cln6Q3U466 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Cln6Q3U466 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Cln6Q3U466 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
Cln6Q3U466 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC19.74■□□□□ 0.75
Cln6Q3U466 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Cln6Q3U466 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC19.74■□□□□ 0.75
Cln6Q3U466 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
Cln6Q3U466 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Cln6Q3U466 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC19.73■□□□□ 0.75
Cln6Q3U466 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
Cln6Q3U466 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Cln6Q3U466 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Cln6Q3U466 AC157572.2-201ENSMUST00000226970 908 ntBASIC19.73■□□□□ 0.75
Cln6Q3U466 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Cln6Q3U466 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Cln6Q3U466 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
Cln6Q3U466 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC19.71■□□□□ 0.75
Cln6Q3U466 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
Cln6Q3U466 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC19.7■□□□□ 0.74
Cln6Q3U466 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Cln6Q3U466 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Cln6Q3U466 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Cln6Q3U466 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
Cln6Q3U466 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC19.69■□□□□ 0.74
Cln6Q3U466 Zfp131-205ENSMUST00000223812 663 ntBASIC19.69■□□□□ 0.74
Cln6Q3U466 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC19.69■□□□□ 0.74
Cln6Q3U466 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Cln6Q3U466 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC19.67■□□□□ 0.74
Cln6Q3U466 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC19.67■□□□□ 0.74
Cln6Q3U466 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Cln6Q3U466 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Cln6Q3U466 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Cln6Q3U466 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Cln6Q3U466 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Cln6Q3U466 AC124392.1-201ENSMUST00000225172 5324 ntBASIC19.66■□□□□ 0.74
Cln6Q3U466 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC19.65■□□□□ 0.74
Cln6Q3U466 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC19.65■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 36.4 ms