Protein–RNA interactions for Protein: Q2MKA7

RSPO1, R-spondin-1, humanhuman

Predicted RBP Predictions only

Length 263 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO1Q2MKA7 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
RSPO1Q2MKA7 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC22.37■■□□□ 1.17
RSPO1Q2MKA7 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC22.37■■□□□ 1.17
RSPO1Q2MKA7 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC22.37■■□□□ 1.17
RSPO1Q2MKA7 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC22.37■■□□□ 1.17
RSPO1Q2MKA7 AC135983.2-203ENST00000454486 1613 ntBASIC22.37■■□□□ 1.17
RSPO1Q2MKA7 EI24-212ENST00000615917 1407 ntTSL 2 BASIC22.37■■□□□ 1.17
RSPO1Q2MKA7 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC22.36■■□□□ 1.17
RSPO1Q2MKA7 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
RSPO1Q2MKA7 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
RSPO1Q2MKA7 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC22.35■■□□□ 1.17
RSPO1Q2MKA7 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC22.35■■□□□ 1.17
RSPO1Q2MKA7 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC22.35■■□□□ 1.17
RSPO1Q2MKA7 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC22.35■■□□□ 1.17
RSPO1Q2MKA7 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC22.34■■□□□ 1.17
RSPO1Q2MKA7 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC22.34■■□□□ 1.17
RSPO1Q2MKA7 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC22.34■■□□□ 1.17
RSPO1Q2MKA7 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC22.33■■□□□ 1.17
RSPO1Q2MKA7 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
RSPO1Q2MKA7 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
RSPO1Q2MKA7 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
RSPO1Q2MKA7 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
RSPO1Q2MKA7 AC044849.2-201ENST00000606596 710 ntBASIC22.33■■□□□ 1.17
RSPO1Q2MKA7 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC22.33■■□□□ 1.17
RSPO1Q2MKA7 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC22.33■■□□□ 1.17
RSPO1Q2MKA7 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC22.33■■□□□ 1.16
RSPO1Q2MKA7 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
RSPO1Q2MKA7 WHAMMP2-203ENST00000563942 1603 ntBASIC22.32■■□□□ 1.16
RSPO1Q2MKA7 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC22.32■■□□□ 1.16
RSPO1Q2MKA7 LINC00273-201ENST00000539813 1452 ntBASIC22.32■■□□□ 1.16
RSPO1Q2MKA7 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
RSPO1Q2MKA7 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
RSPO1Q2MKA7 CIB2-204ENST00000557846 934 ntTSL 3 BASIC22.31■■□□□ 1.16
RSPO1Q2MKA7 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC22.31■■□□□ 1.16
RSPO1Q2MKA7 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
RSPO1Q2MKA7 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC22.31■■□□□ 1.16
RSPO1Q2MKA7 HYAL2-202ENST00000395139 2136 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
RSPO1Q2MKA7 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC22.3■■□□□ 1.16
RSPO1Q2MKA7 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
RSPO1Q2MKA7 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
RSPO1Q2MKA7 SERPING1-205ENST00000403558 2231 ntTSL 5 BASIC22.3■■□□□ 1.16
RSPO1Q2MKA7 PROC-203ENST00000409048 1586 ntTSL 5 BASIC22.29■■□□□ 1.16
RSPO1Q2MKA7 RPS2P35-201ENST00000443417 897 ntBASIC22.29■■□□□ 1.16
RSPO1Q2MKA7 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC22.29■■□□□ 1.16
RSPO1Q2MKA7 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
RSPO1Q2MKA7 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC22.29■■□□□ 1.16
RSPO1Q2MKA7 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
RSPO1Q2MKA7 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
RSPO1Q2MKA7 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC22.27■■□□□ 1.16
RSPO1Q2MKA7 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
RSPO1Q2MKA7 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
RSPO1Q2MKA7 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
RSPO1Q2MKA7 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC22.27■■□□□ 1.16
RSPO1Q2MKA7 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC22.27■■□□□ 1.16
RSPO1Q2MKA7 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC22.27■■□□□ 1.15
RSPO1Q2MKA7 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
RSPO1Q2MKA7 BOD1-206ENST00000480951 814 ntTSL 2 BASIC22.26■■□□□ 1.15
RSPO1Q2MKA7 CALM3-209ENST00000597743 577 ntTSL 4 BASIC22.26■■□□□ 1.15
RSPO1Q2MKA7 MEST-211ENST00000437945 1455 ntTSL 5 BASIC22.26■■□□□ 1.15
RSPO1Q2MKA7 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
RSPO1Q2MKA7 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
RSPO1Q2MKA7 HOXB3-201ENST00000311626 2642 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
RSPO1Q2MKA7 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC22.24■■□□□ 1.15
RSPO1Q2MKA7 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
RSPO1Q2MKA7 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC22.24■■□□□ 1.15
RSPO1Q2MKA7 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
RSPO1Q2MKA7 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC22.23■■□□□ 1.15
RSPO1Q2MKA7 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
RSPO1Q2MKA7 EXOC3-209ENST00000512944 2825 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
RSPO1Q2MKA7 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
RSPO1Q2MKA7 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC22.22■■□□□ 1.15
RSPO1Q2MKA7 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
RSPO1Q2MKA7 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
RSPO1Q2MKA7 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC22.21■■□□□ 1.15
RSPO1Q2MKA7 AC021231.2-201ENST00000594613 730 ntBASIC22.21■■□□□ 1.15
RSPO1Q2MKA7 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
RSPO1Q2MKA7 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
RSPO1Q2MKA7 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC22.2■■□□□ 1.14
RSPO1Q2MKA7 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC22.2■■□□□ 1.14
RSPO1Q2MKA7 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
RSPO1Q2MKA7 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
RSPO1Q2MKA7 AP002414.2-202ENST00000590929 1450 ntBASIC22.19■■□□□ 1.14
RSPO1Q2MKA7 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC22.19■■□□□ 1.14
RSPO1Q2MKA7 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC22.19■■□□□ 1.14
RSPO1Q2MKA7 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC22.18■■□□□ 1.14
RSPO1Q2MKA7 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC22.18■■□□□ 1.14
RSPO1Q2MKA7 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC22.18■■□□□ 1.14
RSPO1Q2MKA7 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
RSPO1Q2MKA7 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC22.17■■□□□ 1.14
RSPO1Q2MKA7 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
RSPO1Q2MKA7 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC22.17■■□□□ 1.14
RSPO1Q2MKA7 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
RSPO1Q2MKA7 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
RSPO1Q2MKA7 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
RSPO1Q2MKA7 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
RSPO1Q2MKA7 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
RSPO1Q2MKA7 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC22.15■■□□□ 1.14
RSPO1Q2MKA7 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC22.15■■□□□ 1.14
RSPO1Q2MKA7 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC22.15■■□□□ 1.14
RSPO1Q2MKA7 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC22.15■■□□□ 1.14
Retrieved 100 of 98,524 protein–RNA pairs in 115.6 ms