Protein–RNA interactions for Protein: Q08685

CLP1, mRNA cleavage and polyadenylation factor CLP1, yeastyeast

Predicted RBP Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
CLP1Q08685 MRP1YDR347W 966 nt8.17□□□□□ -1.1
CLP1Q08685 KRR1YCL059C 951 nt8.15□□□□□ -1.1
CLP1Q08685 CHS7YHR142W 951 nt8.14□□□□□ -1.11
CLP1Q08685 OLA1YBR025C 1185 nt8.14□□□□□ -1.11
CLP1Q08685 RRT14YIL127C 621 nt8.13□□□□□ -1.11
CLP1Q08685 MET30YIL046W 1923 nt8.13□□□□□ -1.11
CLP1Q08685 YPR084WYPR084W 1371 nt8.12□□□□□ -1.11
CLP1Q08685 BEM1YBR200W 1656 nt8.11□□□□□ -1.11
CLP1Q08685 GDH1YOR375C 1365 nt8.11□□□□□ -1.11
CLP1Q08685 CAK1YFL029C 1107 nt8.11□□□□□ -1.11
CLP1Q08685 YOR268CYOR268C 399 nt8.11□□□□□ -1.11
CLP1Q08685 YMR206WYMR206W 942 nt8.1□□□□□ -1.11
CLP1Q08685 RPC31YNL151C 756 nt8.1□□□□□ -1.11
CLP1Q08685 PET18YCR020C 648 nt8.08□□□□□ -1.12
CLP1Q08685 YPT31YER031C 672 nt8.07□□□□□ -1.12
CLP1Q08685 YNL190WYNL190W 615 nt8.07□□□□□ -1.12
CLP1Q08685 AGP3YFL055W 1677 nt8.07□□□□□ -1.12
CLP1Q08685 GGA2YHR108W 1758 nt8.07□□□□□ -1.12
CLP1Q08685 FIT1YDR534C 1587 nt8.06□□□□□ -1.12
CLP1Q08685 OCH1YGL038C 1443 nt8.06□□□□□ -1.12
CLP1Q08685 FRT1YOR324C 1809 nt8.06□□□□□ -1.12
CLP1Q08685 ADA2YDR448W 1305 nt8.05□□□□□ -1.12
CLP1Q08685 tL(UAA)B1tL(UAA)B1 84 nt8.05□□□□□ -1.12
CLP1Q08685 tL(UAA)B2tL(UAA)B2 84 nt8.05□□□□□ -1.12
CLP1Q08685 tL(UAA)DtL(UAA)D 84 nt8.05□□□□□ -1.12
CLP1Q08685 SUP51tL(UAA)J 84 nt8.05□□□□□ -1.12
CLP1Q08685 tL(UAA)KtL(UAA)K 84 nt8.05□□□□□ -1.12
CLP1Q08685 tL(UAA)LtL(UAA)L 84 nt8.05□□□□□ -1.12
CLP1Q08685 tL(UAA)NtL(UAA)N 84 nt8.05□□□□□ -1.12
CLP1Q08685 TAD2YJL035C 753 nt8.05□□□□□ -1.12
CLP1Q08685 MET22YOL064C 1074 nt8.05□□□□□ -1.12
CLP1Q08685 SMC5YOL034W 3282 nt8.05□□□□□ -1.12
CLP1Q08685 PMA2YPL036W 2844 nt8.04□□□□□ -1.12
CLP1Q08685 UTR5YEL035C 501 nt8.04□□□□□ -1.12
CLP1Q08685 KAE1YKR038C 1161 nt8.04□□□□□ -1.12
CLP1Q08685 DPL1YDR294C 1770 nt8.04□□□□□ -1.12
CLP1Q08685 ECM27YJR106W 2178 nt8.03□□□□□ -1.12
CLP1Q08685 TOS1YBR162C 1368 nt8.02□□□□□ -1.13
CLP1Q08685 YDR467CYDR467C 327 nt8.02□□□□□ -1.13
CLP1Q08685 YIR035CYIR035C 765 nt8.02□□□□□ -1.13
CLP1Q08685 RPS6AYPL090C 711 nt8.01□□□□□ -1.13
CLP1Q08685 RPS6BYBR181C 711 nt8.01□□□□□ -1.13
CLP1Q08685 LAS17YOR181W 1902 nt8.01□□□□□ -1.13
CLP1Q08685 ELP4YPL101W 1371 nt8□□□□□ -1.13
CLP1Q08685 YER156CYER156C 1017 nt8□□□□□ -1.13
CLP1Q08685 CMK2YOL016C 1344 nt8□□□□□ -1.13
CLP1Q08685 YJR149WYJR149W 1215 nt7.99□□□□□ -1.13
CLP1Q08685 GPM1YKL152C 744 nt7.99□□□□□ -1.13
CLP1Q08685 PDC6YGR087C 1692 nt7.98□□□□□ -1.13
CLP1Q08685 NBA1YOL070C 1506 nt7.98□□□□□ -1.13
CLP1Q08685 EDC2YER035W 438 nt7.98□□□□□ -1.13
CLP1Q08685 TDH1YJL052W 999 nt7.98□□□□□ -1.13
CLP1Q08685 SDH8YBR269C 417 nt7.98□□□□□ -1.13
CLP1Q08685 LEU4YNL104C 1860 nt7.98□□□□□ -1.13
CLP1Q08685 BAP3YDR046C 1815 nt7.97□□□□□ -1.13
CLP1Q08685 YMC2YBR104W 990 nt7.97□□□□□ -1.13
CLP1Q08685 MFG1YDL233W 1377 nt7.97□□□□□ -1.13
CLP1Q08685 YJL009WYJL009W 327 nt7.96□□□□□ -1.14
CLP1Q08685 BXI1YNL305C 894 nt7.96□□□□□ -1.14
CLP1Q08685 THI3YDL080C 1830 nt7.96□□□□□ -1.14
CLP1Q08685 YJL043WYJL043W 774 nt7.95□□□□□ -1.14
CLP1Q08685 YMR316C-BYMR316C-B 309 nt7.95□□□□□ -1.14
CLP1Q08685 RHO1YPR165W 630 nt7.95□□□□□ -1.14
CLP1Q08685 CRN1YLR429W 1956 nt7.95□□□□□ -1.14
CLP1Q08685 YRF1-2YER190W 5046 nt7.94□□□□□ -1.14
CLP1Q08685 PET494YNR045W 1470 nt7.94□□□□□ -1.14
CLP1Q08685 CTF3YLR381W 2202 nt7.94□□□□□ -1.14
CLP1Q08685 THI73YLR004C 1572 nt7.93□□□□□ -1.14
CLP1Q08685 HEL1YKR017C 1656 nt7.93□□□□□ -1.14
CLP1Q08685 INH1YDL181W 258 nt7.93□□□□□ -1.14
CLP1Q08685 ADE1YAR015W 921 nt7.93□□□□□ -1.14
CLP1Q08685 BUB2YMR055C 921 nt7.93□□□□□ -1.14
CLP1Q08685 PRE5YMR314W 705 nt7.93□□□□□ -1.14
CLP1Q08685 HOG1YLR113W 1308 nt7.93□□□□□ -1.14
CLP1Q08685 GGC1YDL198C 903 nt7.92□□□□□ -1.14
CLP1Q08685 MRS4YKR052C 915 nt7.92□□□□□ -1.14
CLP1Q08685 YBL095WYBL095W 813 nt7.92□□□□□ -1.14
CLP1Q08685 CKI1YLR133W 1749 nt7.91□□□□□ -1.14
CLP1Q08685 FET5YFL041W 1869 nt7.9□□□□□ -1.14
CLP1Q08685 NPP2YEL016C 1482 nt7.9□□□□□ -1.14
CLP1Q08685 TMS1YDR105C 1422 nt7.9□□□□□ -1.14
CLP1Q08685 YDR476CYDR476C 675 nt7.9□□□□□ -1.14
CLP1Q08685 FUS3YBL016W 1062 nt7.9□□□□□ -1.14
CLP1Q08685 NUP53YMR153W 1428 nt7.89□□□□□ -1.15
CLP1Q08685 YIL168WYIL168W 384 nt7.89□□□□□ -1.15
CLP1Q08685 tE(CUC)DtE(CUC)D 72 nt7.88□□□□□ -1.15
CLP1Q08685 tE(CUC)ItE(CUC)I 72 nt7.88□□□□□ -1.15
CLP1Q08685 RNA170RNA170 169 nt7.88□□□□□ -1.15
CLP1Q08685 AAC3YBR085W 924 nt7.88□□□□□ -1.15
CLP1Q08685 ATP2YJR121W 1536 nt7.88□□□□□ -1.15
CLP1Q08685 YCR061WYCR061W 1896 nt7.87□□□□□ -1.15
CLP1Q08685 YIL108WYIL108W 2091 nt7.87□□□□□ -1.15
CLP1Q08685 PMU1YKL128C 888 nt7.86□□□□□ -1.15
CLP1Q08685 tD(GUC)BtD(GUC)B 72 nt7.84□□□□□ -1.15
CLP1Q08685 tD(GUC)DtD(GUC)D 72 nt7.84□□□□□ -1.15
CLP1Q08685 tD(GUC)G1tD(GUC)G1 72 nt7.84□□□□□ -1.15
CLP1Q08685 tD(GUC)G2tD(GUC)G2 72 nt7.84□□□□□ -1.15
CLP1Q08685 tD(GUC)I1tD(GUC)I1 72 nt7.84□□□□□ -1.15
CLP1Q08685 tD(GUC)I2tD(GUC)I2 72 nt7.84□□□□□ -1.15
CLP1Q08685 tD(GUC)J1tD(GUC)J1 72 nt7.84□□□□□ -1.15
Retrieved 100 of 7,029 protein–RNA pairs in 30.4 ms