Protein–RNA interactions for Protein: Q04602

VBA4, Vacuolar basic amino acid transporter 4, yeastyeast

Known RBP Predictions only

Length 768 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
VBA4Q04602 tA(AGC)M1tA(AGC)M1 73 nt7.47□□□□□ -1.21
VBA4Q04602 tA(AGC)M2tA(AGC)M2 73 nt7.47□□□□□ -1.21
VBA4Q04602 tA(AGC)PtA(AGC)P 73 nt7.47□□□□□ -1.21
VBA4Q04602 YDR467CYDR467C 327 nt7.47□□□□□ -1.21
VBA4Q04602 YKR012CYKR012C 378 nt7.47□□□□□ -1.21
VBA4Q04602 IPL1YPL209C 1104 nt7.47□□□□□ -1.21
VBA4Q04602 ALR1YOL130W 2580 nt7.47□□□□□ -1.21
VBA4Q04602 ECM10YEL030W 1935 nt7.46□□□□□ -1.21
VBA4Q04602 tE(CUC)DtE(CUC)D 72 nt7.46□□□□□ -1.22
VBA4Q04602 tE(CUC)ItE(CUC)I 72 nt7.46□□□□□ -1.22
VBA4Q04602 ADH3YMR083W 1128 nt7.46□□□□□ -1.22
VBA4Q04602 PHB2YGR231C 933 nt7.45□□□□□ -1.22
VBA4Q04602 MOB1YIL106W 945 nt7.45□□□□□ -1.22
VBA4Q04602 REX2YLR059C 810 nt7.45□□□□□ -1.22
VBA4Q04602 ORT1YOR130C 879 nt7.45□□□□□ -1.22
VBA4Q04602 SRP54YPR088C 1626 nt7.45□□□□□ -1.22
VBA4Q04602 TRP2YER090W 1524 nt7.44□□□□□ -1.22
VBA4Q04602 YCR025CYCR025C 411 nt7.44□□□□□ -1.22
VBA4Q04602 FLX1YIL134W 936 nt7.44□□□□□ -1.22
VBA4Q04602 PAM17YKR065C 594 nt7.43□□□□□ -1.22
VBA4Q04602 SWP1YMR149W 861 nt7.43□□□□□ -1.22
VBA4Q04602 KGD2YDR148C 1392 nt7.42□□□□□ -1.22
VBA4Q04602 SDS24YBR214W 1584 nt7.42□□□□□ -1.22
VBA4Q04602 HXT11YOL156W 1704 nt7.41□□□□□ -1.22
VBA4Q04602 SLG1YOR008C 1137 nt7.41□□□□□ -1.22
VBA4Q04602 SAN1YDR143C 1833 nt7.41□□□□□ -1.22
VBA4Q04602 DUS3YLR401C 2007 nt7.4□□□□□ -1.22
VBA4Q04602 snR4snR4 186 nt7.4□□□□□ -1.22
VBA4Q04602 ENO1YGR254W 1314 nt7.39□□□□□ -1.23
VBA4Q04602 CYC3YAL039C 810 nt7.39□□□□□ -1.23
VBA4Q04602 POP2YNR052C 1302 nt7.38□□□□□ -1.23
VBA4Q04602 SBP1YHL034C 885 nt7.38□□□□□ -1.23
VBA4Q04602 YJL211CYJL211C 444 nt7.38□□□□□ -1.23
VBA4Q04602 YPT11YNL304W 1254 nt7.38□□□□□ -1.23
VBA4Q04602 VBA3YCL069W 1377 nt7.37□□□□□ -1.23
VBA4Q04602 EMC3YKL207W 762 nt7.37□□□□□ -1.23
VBA4Q04602 ADE16YLR028C 1776 nt7.37□□□□□ -1.23
VBA4Q04602 LPD1YFL018C 1500 nt7.37□□□□□ -1.23
VBA4Q04602 EEB1YPL095C 1371 nt7.36□□□□□ -1.23
VBA4Q04602 YBL095WYBL095W 813 nt7.36□□□□□ -1.23
VBA4Q04602 ADE5,7YGL234W 2409 nt7.36□□□□□ -1.23
VBA4Q04602 SRM1YGL097W 1449 nt7.35□□□□□ -1.23
VBA4Q04602 GAS1YMR307W 1680 nt7.35□□□□□ -1.23
VBA4Q04602 PTC6YCR079W 1329 nt7.34□□□□□ -1.23
VBA4Q04602 GPM1YKL152C 744 nt7.34□□□□□ -1.23
VBA4Q04602 AAT1YKL106W 1356 nt7.33□□□□□ -1.24
VBA4Q04602 YPL277CYPL277C 1464 nt7.33□□□□□ -1.24
VBA4Q04602 YCP4YCR004C 744 nt7.33□□□□□ -1.24
VBA4Q04602 SRP102YKL154W 735 nt7.33□□□□□ -1.24
VBA4Q04602 LYS20YDL182W 1287 nt7.32□□□□□ -1.24
VBA4Q04602 SER2YGR208W 930 nt7.32□□□□□ -1.24
VBA4Q04602 YLR280CYLR280C 351 nt7.32□□□□□ -1.24
VBA4Q04602 SAM50YNL026W 1455 nt7.31□□□□□ -1.24
VBA4Q04602 RSM7YJR113C 744 nt7.31□□□□□ -1.24
VBA4Q04602 YMC2YBR104W 990 nt7.31□□□□□ -1.24
VBA4Q04602 GGA2YHR108W 1758 nt7.31□□□□□ -1.24
VBA4Q04602 YMR210WYMR210W 1350 nt7.3□□□□□ -1.24
VBA4Q04602 HTS1YPR033C 1641 nt7.3□□□□□ -1.24
VBA4Q04602 ERO1YML130C 1692 nt7.29□□□□□ -1.24
VBA4Q04602 YIL177CYIL177C 5277 nt7.28□□□□□ -1.24
VBA4Q04602 YFR020WYFR020W 699 nt7.28□□□□□ -1.24
VBA4Q04602 THI3YDL080C 1830 nt7.28□□□□□ -1.24
VBA4Q04602 PFS2YNL317W 1398 nt7.28□□□□□ -1.24
VBA4Q04602 YMR316C-BYMR316C-B 309 nt7.27□□□□□ -1.25
VBA4Q04602 DIA4YHR011W 1341 nt7.27□□□□□ -1.25
VBA4Q04602 HDA1YNL021W 2121 nt7.26□□□□□ -1.25
VBA4Q04602 MAK32YCR019W 1092 nt7.25□□□□□ -1.25
VBA4Q04602 TGA1tA(UGC)A 73 nt7.25□□□□□ -1.25
VBA4Q04602 tA(UGC)EtA(UGC)E 73 nt7.25□□□□□ -1.25
VBA4Q04602 tA(UGC)GtA(UGC)G 73 nt7.25□□□□□ -1.25
VBA4Q04602 tA(UGC)LtA(UGC)L 73 nt7.25□□□□□ -1.25
VBA4Q04602 tA(UGC)OtA(UGC)O 73 nt7.25□□□□□ -1.25
VBA4Q04602 YGR210CYGR210C 1236 nt7.25□□□□□ -1.25
VBA4Q04602 PZF1YPR186C 1290 nt7.25□□□□□ -1.25
VBA4Q04602 YRF1-1YDR545W 5391 nt7.25□□□□□ -1.25
VBA4Q04602 YRF1-5YLR467W 5391 nt7.25□□□□□ -1.25
VBA4Q04602 YRF1-8YOR396W 5391 nt7.25□□□□□ -1.25
VBA4Q04602 DAL7YIR031C 1665 nt7.25□□□□□ -1.25
VBA4Q04602 SWM1YDR260C 513 nt7.24□□□□□ -1.25
VBA4Q04602 YLR072WYLR072W 2082 nt7.24□□□□□ -1.25
VBA4Q04602 HSV2YGR223C 1347 nt7.24□□□□□ -1.25
VBA4Q04602 FCY1YPR062W 477 nt7.23□□□□□ -1.25
VBA4Q04602 YKR023WYKR023W 1593 nt7.23□□□□□ -1.25
VBA4Q04602 MET30YIL046W 1923 nt7.23□□□□□ -1.25
VBA4Q04602 YIA6YIL006W 1122 nt7.22□□□□□ -1.25
VBA4Q04602 YLR460CYLR460C 1131 nt7.22□□□□□ -1.25
VBA4Q04602 YMR007WYMR007W 381 nt7.22□□□□□ -1.25
VBA4Q04602 MDH2YOL126C 1134 nt7.22□□□□□ -1.25
VBA4Q04602 HMT1YBR034C 1047 nt7.22□□□□□ -1.25
VBA4Q04602 BIM1YER016W 1035 nt7.21□□□□□ -1.26
VBA4Q04602 DPH5YLR172C 903 nt7.21□□□□□ -1.26
VBA4Q04602 YNL190WYNL190W 615 nt7.21□□□□□ -1.26
VBA4Q04602 HAL5YJL165C 2568 nt7.21□□□□□ -1.26
VBA4Q04602 MRS4YKR052C 915 nt7.2□□□□□ -1.26
VBA4Q04602 RCR1YBR005W 642 nt7.2□□□□□ -1.26
VBA4Q04602 LEA1YPL213W 717 nt7.2□□□□□ -1.26
VBA4Q04602 SMC5YOL034W 3282 nt7.19□□□□□ -1.26
VBA4Q04602 CRN1YLR429W 1956 nt7.19□□□□□ -1.26
VBA4Q04602 YRF1-3YGR296W 5580 nt7.19□□□□□ -1.26
VBA4Q04602 YRF1-6YNL339C 5580 nt7.19□□□□□ -1.26
Retrieved 100 of 7,029 protein–RNA pairs in 33.7 ms