Protein–RNA interactions for Protein: Q01844

EWSR1, RNA-binding protein EWS, humanhuman

Known RBP eCLIP

Length 656 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EWSR1Q01844 HBP1-212ENST00000485846 2420 ntAPPRIS P1 TSL 2 BASIC12.36□□□□□ -0.432e-12■■■■■ 30.5
EWSR1Q01844 HBP1-207ENST00000468401 573 ntTSL 411.5□□□□□ -0.572e-12■■■■■ 30.5
EWSR1Q01844 HBP1-206ENST00000468116 579 ntTSL 49.75□□□□□ -0.852e-12■■■■■ 30.5
EWSR1Q01844 HBP1-213ENST00000497535 702 ntTSL 29.75□□□□□ -0.852e-12■■■■■ 30.5
EWSR1Q01844 PLXNA1-201ENST00000393409 9066 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.563e-7■■■■■ 30.4
EWSR1Q01844 C22orf34-201ENST00000343999 2816 ntTSL 2 BASIC12.98□□□□□ -0.337e-9■■■■■ 30.4
EWSR1Q01844 DOT1L-205ENST00000478937 638 ntTSL 39.81□□□□□ -0.848e-7■■■■■ 30.4
EWSR1Q01844 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.659e-7■■■■■ 30.4
EWSR1Q01844 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.039e-7■■■■■ 30.4
EWSR1Q01844 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.079e-7■■■■■ 30.4
EWSR1Q01844 SLC22A18-210ENST00000492567 684 ntTSL 214.3□□□□□ -0.129e-7■■■■■ 30.4
EWSR1Q01844 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC12.37□□□□□ -0.439e-7■■■■■ 30.4
EWSR1Q01844 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.11e-6■■■■■ 30.4
EWSR1Q01844 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.141e-6■■■■■ 30.4
EWSR1Q01844 PIP5K1C-204ENST00000587482 1311 ntTSL 511.97□□□□□ -0.496e-7■■■■■ 30.4
EWSR1Q01844 DVL1-203ENST00000472445 639 ntTSL 213.29□□□□□ -0.283e-8■■■■■ 30.4
EWSR1Q01844 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.056e-7■■■■■ 30.3
EWSR1Q01844 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.376e-7■■■■■ 30.3
EWSR1Q01844 BSG-212ENST00000590218 545 ntTSL 214.47□□□□□ -0.094e-8■■■■■ 30.3
EWSR1Q01844 PTDSS2-203ENST00000525727 837 ntTSL 1 (best)15.61■□□□□ 0.091e-6■■■■■ 30.3
EWSR1Q01844 PTDSS2-207ENST00000527479 520 ntTSL 515.26■□□□□ 0.031e-6■■■■■ 30.3
EWSR1Q01844 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC15.65■□□□□ 0.11e-7■■■■■ 30.2
EWSR1Q01844 TCF25-208ENST00000563032 274 ntTSL 214.95□□□□□ -0.021e-7■■■■■ 30.2
EWSR1Q01844 TCF25-212ENST00000564652 860 ntTSL 314.69□□□□□ -0.061e-7■■■■■ 30.2
EWSR1Q01844 TCF25-203ENST00000561585 981 ntTSL 212.68□□□□□ -0.381e-7■■■■■ 30.2
EWSR1Q01844 TCF25-214ENST00000565196 655 ntTSL 511.96□□□□□ -0.491e-7■■■■■ 30.2
EWSR1Q01844 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC20.28■□□□□ 0.846e-7■■■■■ 30.2
EWSR1Q01844 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.326e-7■■■■■ 30.2
EWSR1Q01844 MXI1-203ENST00000361248 2188 ntTSL 1 (best) BASIC6.4□□□□□ -1.388e-8■■■■■ 30.1
EWSR1Q01844 RXRA-203ENST00000484822 5215 ntTSL 213.35□□□□□ -0.276e-7■■■■■ 30.1
EWSR1Q01844 MMP17-210ENST00000545671 775 ntTSL 318.3■□□□□ 0.522e-7■■■■■ 30
EWSR1Q01844 MMP17-211ENST00000545790 552 ntTSL 217.47■□□□□ 0.392e-7■■■■■ 30
EWSR1Q01844 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.362e-7■■■■■ 30
EWSR1Q01844 CD81-205ENST00000475945 606 ntTSL 212.97□□□□□ -0.335e-7■■■■■ 29.9
EWSR1Q01844 CD81-201ENST00000263645 1520 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.595e-7■■■■■ 29.9
EWSR1Q01844 CD81-215ENST00000530648 558 ntTSL 410.91□□□□□ -0.665e-7■■■■■ 29.9
EWSR1Q01844 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC20.23■□□□□ 0.831e-7■■■■■ 29.9
EWSR1Q01844 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC17.09■□□□□ 0.331e-7■■■■■ 29.9
EWSR1Q01844 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.111e-7■■■■■ 29.9
EWSR1Q01844 DHRSX-204ENST00000441131 539 ntTSL 25.66□□□□□ -1.57e-9■■■■■ 29.8
EWSR1Q01844 BSG-210ENST00000576925 611 ntTSL 212.71□□□□□ -0.371e-7■■■■■ 29.8
EWSR1Q01844 SFMBT2-201ENST00000361972 7922 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.759e-8■■■■■ 29.8
EWSR1Q01844 AL512356.1-201ENST00000548203 535 ntTSL 3 BASIC9.42□□□□□ -0.95e-7■■■■■ 29.7
EWSR1Q01844 JAG2-201ENST00000331782 5835 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.15e-7■■■■■ 29.7
EWSR1Q01844 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC20.28■□□□□ 0.845e-7■■■■■ 29.7
EWSR1Q01844 RANBP1-213ENST00000486575 2177 ntTSL 218.17■□□□□ 0.57e-17■■■■■ 29.7
EWSR1Q01844 C22orf34-202ENST00000400023 1469 ntTSL 1 (best)12.41□□□□□ -0.422e-8■■■■■ 29.7
EWSR1Q01844 LINC00894-205ENST00000449111 3414 ntTSL 57.96□□□□□ -1.145e-7■■■■■ 29.7
EWSR1Q01844 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC17.1■□□□□ 0.332e-8■■■■■ 29.6
EWSR1Q01844 THUMPD3-AS1-209ENST00000518437 240 ntTSL 212.89□□□□□ -0.353e-8■■■■■ 29.6
EWSR1Q01844 THUMPD3-AS1-212ENST00000520447 1809 ntTSL 5 BASIC11.06□□□□□ -0.643e-8■■■■■ 29.6
EWSR1Q01844 THUMPD3-AS1-203ENST00000469846 670 ntTSL 38.6□□□□□ -1.033e-8■■■■■ 29.6
EWSR1Q01844 THUMPD3-AS1-205ENST00000481221 683 ntTSL 3 BASIC6.22□□□□□ -1.413e-8■■■■■ 29.6
EWSR1Q01844 THUMPD3-AS1-215ENST00000521609 793 ntTSL 5 BASIC4.63□□□□□ -1.673e-8■■■■■ 29.6
EWSR1Q01844 THUMPD3-AS1-218ENST00000522525 1867 ntTSL 1 (best)4.29□□□□□ -1.723e-8■■■■■ 29.6
EWSR1Q01844 THUMPD3-AS1-210ENST00000519043 1115 ntTSL 3 BASIC4.05□□□□□ -1.763e-8■■■■■ 29.6
EWSR1Q01844 THUMPD3-AS1-201ENST00000467069 667 ntTSL 53.26□□□□□ -1.893e-8■■■■■ 29.6
EWSR1Q01844 THUMPD3-AS1-216ENST00000521708 549 ntTSL 33.01□□□□□ -1.933e-8■■■■■ 29.6
EWSR1Q01844 THUMPD3-AS1-207ENST00000494680 544 ntTSL 52.73□□□□□ -1.973e-8■■■■■ 29.6
EWSR1Q01844 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.362e-7■■■■■ 29.5
EWSR1Q01844 TTC7B-202ENST00000553948 630 ntTSL 523.79■■□□□ 1.46e-8■■■■■ 29.5
EWSR1Q01844 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC14.95□□□□□ -0.026e-8■■■■■ 29.5
EWSR1Q01844 MLF1-215ENST00000498592 707 ntTSL 313.98□□□□□ -0.176e-8■■■■■ 29.5
EWSR1Q01844 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC12.7□□□□□ -0.386e-8■■■■■ 29.5
EWSR1Q01844 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC12.59□□□□□ -0.396e-8■■■■■ 29.5
EWSR1Q01844 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC12.29□□□□□ -0.446e-8■■■■■ 29.5
EWSR1Q01844 MLF1-212ENST00000491767 787 ntTSL 1 (best)12.13□□□□□ -0.476e-8■■■■■ 29.5
EWSR1Q01844 MLF1-201ENST00000355893 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.486e-8■■■■■ 29.5
EWSR1Q01844 MLF1-217ENST00000619577 2290 ntTSL 5 BASIC11.98□□□□□ -0.496e-8■■■■■ 29.5
EWSR1Q01844 PDXK-217ENST00000490666 577 ntTSL 510.85□□□□□ -0.676e-8■■■■■ 29.5
EWSR1Q01844 TBC1D14-201ENST00000409757 4925 ntAPPRIS P3 TSL 1 (best) BASIC10.53□□□□□ -0.726e-8■■■■■ 29.5
EWSR1Q01844 MLF1-209ENST00000482628 1050 ntTSL 5 BASIC10.21□□□□□ -0.776e-8■■■■■ 29.5
EWSR1Q01844 ST6GAL1-216ENST00000458216 507 ntTSL 39.85□□□□□ -0.838e-8■■■■■ 29.5
EWSR1Q01844 SH3BP2-216ENST00000510193 407 ntTSL 39.4□□□□□ -0.96e-8■■■■■ 29.5
EWSR1Q01844 TBC1D14-207ENST00000448507 4887 ntAPPRIS P3 TSL 5 BASIC9.07□□□□□ -0.966e-8■■■■■ 29.5
EWSR1Q01844 MLF1-202ENST00000359117 2222 ntTSL 1 (best) BASIC8.67□□□□□ -1.026e-8■■■■■ 29.5
EWSR1Q01844 ST6GAL1-219ENST00000468614 642 ntTSL 28.35□□□□□ -1.078e-8■■■■■ 29.5
EWSR1Q01844 INPP5A-201ENST00000342652 832 ntTSL 57.48□□□□□ -1.216e-8■■■■■ 29.5
EWSR1Q01844 MLF1-214ENST00000497004 3048 ntTSL 1 (best)7.18□□□□□ -1.266e-8■■■■■ 29.5
EWSR1Q01844 TTC7B-201ENST00000328459 19458 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.296e-8■■■■■ 29.5
EWSR1Q01844 MLF1-213ENST00000495452 742 ntTSL 35.99□□□□□ -1.456e-8■■■■■ 29.5
EWSR1Q01844 MLF1-207ENST00000477042 750 ntTSL 55.6□□□□□ -1.516e-8■■■■■ 29.5
EWSR1Q01844 MLF1-205ENST00000469452 1098 ntTSL 1 (best) BASIC4.5□□□□□ -1.696e-8■■■■■ 29.5
EWSR1Q01844 MLF1-208ENST00000478894 1372 ntTSL 2 BASIC4.14□□□□□ -1.756e-8■■■■■ 29.5
EWSR1Q01844 MLF1-204ENST00000466246 653 ntTSL 21.58□□□□□ -2.166e-8■■■■■ 29.5
EWSR1Q01844 MLF1-211ENST00000487838 473 ntTSL 21.42□□□□□ -2.186e-8■■■■■ 29.5
EWSR1Q01844 PPP6R2-206ENST00000427222 1811 ntTSL 514.57□□□□□ -0.083e-7■■■■■ 29.5
EWSR1Q01844 PPP6R2-202ENST00000359139 4035 ntAPPRIS ALT2 TSL 2 BASIC12.32□□□□□ -0.443e-7■■■■■ 29.5
EWSR1Q01844 PPP6R2-204ENST00000395744 3293 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.453e-7■■■■■ 29.5
EWSR1Q01844 PPP6R2-203ENST00000395741 3304 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.473e-7■■■■■ 29.5
EWSR1Q01844 PPP6R2-205ENST00000401672 2199 ntTSL 211.41□□□□□ -0.583e-7■■■■■ 29.5
EWSR1Q01844 PPP6R2-209ENST00000612753 4104 ntAPPRIS ALT2 TSL 2 BASIC11.04□□□□□ -0.643e-7■■■■■ 29.5
EWSR1Q01844 PPP6R2-201ENST00000216061 3415 ntAPPRIS ALT2 TSL 1 (best) BASIC10.05□□□□□ -0.83e-7■■■■■ 29.5
EWSR1Q01844 AC011450.1-202ENST00000358234 573 ntTSL 4 BASIC11.43□□□□□ -0.589e-8■■■■■ 29.4
EWSR1Q01844 AC011450.1-201ENST00000602554 511 ntTSL 26.43□□□□□ -1.389e-8■■■■■ 29.4
EWSR1Q01844 SSBP4-208ENST00000600628 550 ntTSL 36.41□□□□□ -1.384e-7■■■■■ 29.4
EWSR1Q01844 FAM98B-202ENST00000397609 4388 ntAPPRIS P2 TSL 5 BASIC12.39□□□□□ -0.432e-10■■■■■ 29.4
EWSR1Q01844 FAM98B-204ENST00000559431 305 ntTSL 59.18□□□□□ -0.942e-10■■■■■ 29.4
EWSR1Q01844 TMEM91-202ENST00000356385 944 ntTSL 1 (best) BASIC11.38□□□□□ -0.591e-7■■■■■ 29.4
EWSR1Q01844 TMEM91-201ENST00000342187 454 ntTSL 57.73□□□□□ -1.171e-7■■■■■ 29.4
Retrieved 100 of 7,101 protein–RNA pairs in 224.1 ms