Protein–RNA interactions for Protein: P97334

Nkx2-3, Homeobox protein Nkx-2.3, mousemouse

Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-3P97334 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC30.67■■■□□ 2.5
Nkx2-3P97334 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC30.67■■■□□ 2.5
Nkx2-3P97334 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC30.66■■■□□ 2.5
Nkx2-3P97334 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC30.65■■■□□ 2.5
Nkx2-3P97334 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC30.65■■■□□ 2.5
Nkx2-3P97334 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC30.65■■■□□ 2.5
Nkx2-3P97334 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC30.65■■■□□ 2.5
Nkx2-3P97334 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC30.62■■■□□ 2.49
Nkx2-3P97334 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC30.62■■■□□ 2.49
Nkx2-3P97334 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC30.62■■■□□ 2.49
Nkx2-3P97334 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC30.62■■■□□ 2.49
Nkx2-3P97334 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC30.61■■■□□ 2.49
Nkx2-3P97334 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC30.61■■■□□ 2.49
Nkx2-3P97334 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC30.59■■■□□ 2.49
Nkx2-3P97334 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC30.59■■■□□ 2.49
Nkx2-3P97334 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC30.59■■■□□ 2.49
Nkx2-3P97334 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC30.59■■■□□ 2.49
Nkx2-3P97334 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC30.59■■■□□ 2.49
Nkx2-3P97334 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC30.58■■■□□ 2.49
Nkx2-3P97334 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC30.57■■■□□ 2.48
Nkx2-3P97334 Gm9905-201ENSMUST00000065740 1845 ntBASIC30.57■■■□□ 2.48
Nkx2-3P97334 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC30.55■■■□□ 2.48
Nkx2-3P97334 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC30.55■■■□□ 2.48
Nkx2-3P97334 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC30.55■■■□□ 2.48
Nkx2-3P97334 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC30.54■■■□□ 2.48
Nkx2-3P97334 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC30.54■■■□□ 2.48
Nkx2-3P97334 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC30.54■■■□□ 2.48
Nkx2-3P97334 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC30.54■■■□□ 2.48
Nkx2-3P97334 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC30.53■■■□□ 2.48
Nkx2-3P97334 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC30.53■■■□□ 2.48
Nkx2-3P97334 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC30.53■■■□□ 2.48
Nkx2-3P97334 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC30.52■■■□□ 2.48
Nkx2-3P97334 Gm6206-201ENSMUST00000133472 2199 ntBASIC30.51■■■□□ 2.48
Nkx2-3P97334 Gm37136-201ENSMUST00000194368 194 ntBASIC30.5■■■□□ 2.47
Nkx2-3P97334 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC30.5■■■□□ 2.47
Nkx2-3P97334 Scarna2-201ENSMUST00000157560 414 ntBASIC30.48■■■□□ 2.47
Nkx2-3P97334 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC30.48■■■□□ 2.47
Nkx2-3P97334 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC30.48■■■□□ 2.47
Nkx2-3P97334 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC30.47■■■□□ 2.47
Nkx2-3P97334 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC30.47■■■□□ 2.47
Nkx2-3P97334 Gm45364-201ENSMUST00000210883 159 ntBASIC30.47■■■□□ 2.47
Nkx2-3P97334 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC30.45■■■□□ 2.46
Nkx2-3P97334 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC30.44■■■□□ 2.46
Nkx2-3P97334 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC30.44■■■□□ 2.46
Nkx2-3P97334 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC30.43■■■□□ 2.46
Nkx2-3P97334 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC30.42■■■□□ 2.46
Nkx2-3P97334 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC30.42■■■□□ 2.46
Nkx2-3P97334 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC30.41■■■□□ 2.46
Nkx2-3P97334 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC30.41■■■□□ 2.46
Nkx2-3P97334 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC30.39■■■□□ 2.46
Nkx2-3P97334 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC30.38■■■□□ 2.45
Nkx2-3P97334 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC30.38■■■□□ 2.45
Nkx2-3P97334 Gm4799-201ENSMUST00000095396 657 ntBASIC30.38■■■□□ 2.45
Nkx2-3P97334 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC30.38■■■□□ 2.45
Nkx2-3P97334 Gm16437-201ENSMUST00000025669 507 ntBASIC30.36■■■□□ 2.45
Nkx2-3P97334 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC30.36■■■□□ 2.45
Nkx2-3P97334 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC30.36■■■□□ 2.45
Nkx2-3P97334 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC30.35■■■□□ 2.45
Nkx2-3P97334 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC30.35■■■□□ 2.45
Nkx2-3P97334 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC30.35■■■□□ 2.45
Nkx2-3P97334 Mir3960-201ENSMUST00000198213 73 ntBASIC30.34■■■□□ 2.45
Nkx2-3P97334 Pkd1-207ENSMUST00000228550 1050 ntBASIC30.34■■■□□ 2.45
Nkx2-3P97334 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC30.33■■■□□ 2.45
Nkx2-3P97334 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC30.33■■■□□ 2.45
Nkx2-3P97334 Gm9806-201ENSMUST00000051080 552 ntBASIC30.33■■■□□ 2.45
Nkx2-3P97334 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC30.33■■■□□ 2.45
Nkx2-3P97334 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC30.33■■■□□ 2.45
Nkx2-3P97334 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC30.32■■■□□ 2.45
Nkx2-3P97334 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC30.32■■■□□ 2.44
Nkx2-3P97334 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC30.32■■■□□ 2.44
Nkx2-3P97334 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC30.32■■■□□ 2.44
Nkx2-3P97334 AC154454.1-201ENSMUST00000225253 216 ntBASIC30.32■■■□□ 2.44
Nkx2-3P97334 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC30.31■■■□□ 2.44
Nkx2-3P97334 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC30.31■■■□□ 2.44
Nkx2-3P97334 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC30.3■■■□□ 2.44
Nkx2-3P97334 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC30.3■■■□□ 2.44
Nkx2-3P97334 Gm12366-201ENSMUST00000121722 873 ntBASIC30.3■■■□□ 2.44
Nkx2-3P97334 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC30.3■■■□□ 2.44
Nkx2-3P97334 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC30.3■■■□□ 2.44
Nkx2-3P97334 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC30.3■■■□□ 2.44
Nkx2-3P97334 Gm5786-201ENSMUST00000085368 882 ntBASIC30.3■■■□□ 2.44
Nkx2-3P97334 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC30.3■■■□□ 2.44
Nkx2-3P97334 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC30.29■■■□□ 2.44
Nkx2-3P97334 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC30.29■■■□□ 2.44
Nkx2-3P97334 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC30.29■■■□□ 2.44
Nkx2-3P97334 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC30.29■■■□□ 2.44
Nkx2-3P97334 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC30.28■■■□□ 2.44
Nkx2-3P97334 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC30.28■■■□□ 2.44
Nkx2-3P97334 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC30.27■■■□□ 2.44
Nkx2-3P97334 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC30.27■■■□□ 2.44
Nkx2-3P97334 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC30.25■■■□□ 2.43
Nkx2-3P97334 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC30.25■■■□□ 2.43
Nkx2-3P97334 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC30.24■■■□□ 2.43
Nkx2-3P97334 Gm11687-201ENSMUST00000118911 886 ntBASIC30.24■■■□□ 2.43
Nkx2-3P97334 Amer2-203ENSMUST00000225247 2662 ntBASIC30.23■■■□□ 2.43
Nkx2-3P97334 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC30.23■■■□□ 2.43
Nkx2-3P97334 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC30.23■■■□□ 2.43
Nkx2-3P97334 Gm27502-201ENSMUST00000183495 199 ntBASIC30.23■■■□□ 2.43
Nkx2-3P97334 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC30.23■■■□□ 2.43
Nkx2-3P97334 Gm13889-201ENSMUST00000099689 1386 ntBASIC30.23■■■□□ 2.43
Retrieved 100 of 76,532 protein–RNA pairs in 292.1 ms