Protein–RNA interactions for Protein: P86449

Trim43c, Tripartite motif-containing protein 43C, mousemouse

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43cP86449 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC25.91■■□□□ 1.74
Trim43cP86449 Gm9939-201ENSMUST00000067161 1154 ntBASIC25.91■■□□□ 1.74
Trim43cP86449 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
Trim43cP86449 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC25.91■■□□□ 1.74
Trim43cP86449 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
Trim43cP86449 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC25.9■■□□□ 1.74
Trim43cP86449 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC25.9■■□□□ 1.74
Trim43cP86449 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC25.88■■□□□ 1.73
Trim43cP86449 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
Trim43cP86449 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC25.88■■□□□ 1.73
Trim43cP86449 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC25.87■■□□□ 1.73
Trim43cP86449 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
Trim43cP86449 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC25.85■■□□□ 1.73
Trim43cP86449 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
Trim43cP86449 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
Trim43cP86449 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC25.85■■□□□ 1.73
Trim43cP86449 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC25.84■■□□□ 1.73
Trim43cP86449 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC25.83■■□□□ 1.73
Trim43cP86449 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC25.82■■□□□ 1.72
Trim43cP86449 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC25.82■■□□□ 1.72
Trim43cP86449 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
Trim43cP86449 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
Trim43cP86449 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC25.81■■□□□ 1.72
Trim43cP86449 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC25.81■■□□□ 1.72
Trim43cP86449 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC25.8■■□□□ 1.72
Trim43cP86449 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
Trim43cP86449 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC25.79■■□□□ 1.72
Trim43cP86449 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
Trim43cP86449 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
Trim43cP86449 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC25.78■■□□□ 1.72
Trim43cP86449 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC25.78■■□□□ 1.72
Trim43cP86449 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC25.78■■□□□ 1.72
Trim43cP86449 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
Trim43cP86449 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC25.78■■□□□ 1.72
Trim43cP86449 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC25.77■■□□□ 1.72
Trim43cP86449 Gm8503-201ENSMUST00000118131 455 ntBASIC25.76■■□□□ 1.71
Trim43cP86449 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.71
Trim43cP86449 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC25.76■■□□□ 1.71
Trim43cP86449 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC25.75■■□□□ 1.71
Trim43cP86449 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
Trim43cP86449 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC25.74■■□□□ 1.71
Trim43cP86449 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC25.74■■□□□ 1.71
Trim43cP86449 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC25.73■■□□□ 1.71
Trim43cP86449 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC25.73■■□□□ 1.71
Trim43cP86449 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
Trim43cP86449 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
Trim43cP86449 Gm6821-201ENSMUST00000107540 542 ntBASIC25.72■■□□□ 1.71
Trim43cP86449 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
Trim43cP86449 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC25.71■■□□□ 1.71
Trim43cP86449 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC25.71■■□□□ 1.71
Trim43cP86449 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC25.7■■□□□ 1.71
Trim43cP86449 AC122428.3-201ENSMUST00000215551 2290 ntBASIC25.7■■□□□ 1.7
Trim43cP86449 AC153890.1-201ENSMUST00000220021 2469 ntBASIC25.69■■□□□ 1.7
Trim43cP86449 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC25.68■■□□□ 1.7
Trim43cP86449 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC25.68■■□□□ 1.7
Trim43cP86449 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC25.68■■□□□ 1.7
Trim43cP86449 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC25.68■■□□□ 1.7
Trim43cP86449 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
Trim43cP86449 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC25.67■■□□□ 1.7
Trim43cP86449 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC25.67■■□□□ 1.7
Trim43cP86449 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC25.67■■□□□ 1.7
Trim43cP86449 Gm37847-201ENSMUST00000192163 1497 ntBASIC25.66■■□□□ 1.7
Trim43cP86449 Gm31748-201ENSMUST00000194938 1497 ntBASIC25.66■■□□□ 1.7
Trim43cP86449 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC25.66■■□□□ 1.7
Trim43cP86449 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC25.66■■□□□ 1.7
Trim43cP86449 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC25.66■■□□□ 1.7
Trim43cP86449 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC25.65■■□□□ 1.7
Trim43cP86449 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC25.64■■□□□ 1.7
Trim43cP86449 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC25.64■■□□□ 1.69
Trim43cP86449 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC25.63■■□□□ 1.69
Trim43cP86449 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC25.63■■□□□ 1.69
Trim43cP86449 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
Trim43cP86449 Gm14121-201ENSMUST00000121441 1380 ntBASIC25.63■■□□□ 1.69
Trim43cP86449 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
Trim43cP86449 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC25.63■■□□□ 1.69
Trim43cP86449 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC25.62■■□□□ 1.69
Trim43cP86449 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC25.61■■□□□ 1.69
Trim43cP86449 Particl-201ENSMUST00000205370 1560 ntBASIC25.61■■□□□ 1.69
Trim43cP86449 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC25.6■■□□□ 1.69
Trim43cP86449 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC25.6■■□□□ 1.69
Trim43cP86449 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
Trim43cP86449 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC25.59■■□□□ 1.69
Trim43cP86449 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC25.58■■□□□ 1.69
Trim43cP86449 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC25.58■■□□□ 1.69
Trim43cP86449 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
Trim43cP86449 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
Trim43cP86449 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC25.56■■□□□ 1.68
Trim43cP86449 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC25.56■■□□□ 1.68
Trim43cP86449 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
Trim43cP86449 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
Trim43cP86449 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
Trim43cP86449 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
Trim43cP86449 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC25.53■■□□□ 1.68
Trim43cP86449 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC25.52■■□□□ 1.68
Trim43cP86449 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
Trim43cP86449 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
Trim43cP86449 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
Trim43cP86449 Gm37136-201ENSMUST00000194368 194 ntBASIC25.5■■□□□ 1.67
Trim43cP86449 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC25.5■■□□□ 1.67
Trim43cP86449 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC25.5■■□□□ 1.67
Retrieved 100 of 76,532 protein–RNA pairs in 28.2 ms