Protein–RNA interactions for Protein: P84228

Hist1h3b, Histone H3.2, mousemouse

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hist1h3bP84228 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Hist1h3bP84228 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC20.64■□□□□ 0.89
Hist1h3bP84228 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Hist1h3bP84228 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Hist1h3bP84228 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC20.64■□□□□ 0.89
Hist1h3bP84228 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Hist1h3bP84228 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC20.63■□□□□ 0.89
Hist1h3bP84228 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Hist1h3bP84228 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Hist1h3bP84228 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Hist1h3bP84228 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
Hist1h3bP84228 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Hist1h3bP84228 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Hist1h3bP84228 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Hist1h3bP84228 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Hist1h3bP84228 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
Hist1h3bP84228 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
Hist1h3bP84228 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC20.6■□□□□ 0.89
Hist1h3bP84228 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC20.6■□□□□ 0.89
Hist1h3bP84228 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Hist1h3bP84228 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC20.59■□□□□ 0.89
Hist1h3bP84228 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Hist1h3bP84228 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Hist1h3bP84228 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Hist1h3bP84228 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Hist1h3bP84228 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Hist1h3bP84228 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Hist1h3bP84228 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Hist1h3bP84228 Nkain2-201ENSMUST00000092602 558 ntBASIC20.56■□□□□ 0.88
Hist1h3bP84228 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
Hist1h3bP84228 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC20.55■□□□□ 0.88
Hist1h3bP84228 Gm42809-201ENSMUST00000198429 1138 ntBASIC20.55■□□□□ 0.88
Hist1h3bP84228 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
Hist1h3bP84228 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC20.54■□□□□ 0.88
Hist1h3bP84228 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Hist1h3bP84228 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC20.54■□□□□ 0.88
Hist1h3bP84228 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
Hist1h3bP84228 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Hist1h3bP84228 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
Hist1h3bP84228 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Hist1h3bP84228 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Hist1h3bP84228 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Hist1h3bP84228 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
Hist1h3bP84228 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Hist1h3bP84228 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Hist1h3bP84228 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Hist1h3bP84228 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Hist1h3bP84228 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
Hist1h3bP84228 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Hist1h3bP84228 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC20.5■□□□□ 0.87
Hist1h3bP84228 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Hist1h3bP84228 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Hist1h3bP84228 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Hist1h3bP84228 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
Hist1h3bP84228 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
Hist1h3bP84228 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC20.49■□□□□ 0.87
Hist1h3bP84228 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Hist1h3bP84228 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
Hist1h3bP84228 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
Hist1h3bP84228 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Hist1h3bP84228 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
Hist1h3bP84228 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Hist1h3bP84228 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC20.48■□□□□ 0.87
Hist1h3bP84228 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Hist1h3bP84228 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC20.47■□□□□ 0.87
Hist1h3bP84228 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC20.47■□□□□ 0.87
Hist1h3bP84228 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Hist1h3bP84228 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC20.46■□□□□ 0.87
Hist1h3bP84228 AC122428.3-201ENSMUST00000215551 2290 ntBASIC20.46■□□□□ 0.87
Hist1h3bP84228 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
Hist1h3bP84228 Gm37847-201ENSMUST00000192163 1497 ntBASIC20.45■□□□□ 0.86
Hist1h3bP84228 Gm31748-201ENSMUST00000194938 1497 ntBASIC20.45■□□□□ 0.86
Hist1h3bP84228 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Hist1h3bP84228 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC20.45■□□□□ 0.86
Hist1h3bP84228 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
Hist1h3bP84228 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Hist1h3bP84228 Particl-201ENSMUST00000205370 1560 ntBASIC20.44■□□□□ 0.86
Hist1h3bP84228 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Hist1h3bP84228 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Hist1h3bP84228 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Hist1h3bP84228 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Hist1h3bP84228 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC20.43■□□□□ 0.86
Hist1h3bP84228 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC20.42■□□□□ 0.86
Hist1h3bP84228 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC20.42■□□□□ 0.86
Hist1h3bP84228 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Hist1h3bP84228 Gm9939-201ENSMUST00000067161 1154 ntBASIC20.42■□□□□ 0.86
Hist1h3bP84228 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC20.42■□□□□ 0.86
Hist1h3bP84228 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Hist1h3bP84228 AC153890.1-201ENSMUST00000220021 2469 ntBASIC20.42■□□□□ 0.86
Hist1h3bP84228 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC20.41■□□□□ 0.86
Hist1h3bP84228 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC20.41■□□□□ 0.86
Hist1h3bP84228 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Hist1h3bP84228 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Hist1h3bP84228 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Hist1h3bP84228 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC20.39■□□□□ 0.85
Hist1h3bP84228 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Hist1h3bP84228 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Hist1h3bP84228 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Hist1h3bP84228 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Hist1h3bP84228 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Retrieved 100 of 76,532 protein–RNA pairs in 8.8 ms