Protein–RNA interactions for Protein: P78357

CNTNAP1, Contactin-associated protein 1, humanhuman

Predictions only

Length 1,384 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP1P78357 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC31.23■■■□□ 2.59
CNTNAP1P78357 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC31.23■■■□□ 2.59
CNTNAP1P78357 LINC00273-201ENST00000539813 1452 ntBASIC31.23■■■□□ 2.59
CNTNAP1P78357 PDXP-201ENST00000215904 2010 ntAPPRIS P1 TSL 1 (best) BASIC31.22■■■□□ 2.59
CNTNAP1P78357 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC31.22■■■□□ 2.59
CNTNAP1P78357 HYI-213ENST00000583037 1322 ntTSL 5 BASIC31.22■■■□□ 2.59
CNTNAP1P78357 GAL3ST1-204ENST00000402369 1712 ntAPPRIS P1 TSL 3 BASIC31.22■■■□□ 2.59
CNTNAP1P78357 TPRA1-201ENST00000296210 1725 ntTSL 1 (best) BASIC31.21■■■□□ 2.59
CNTNAP1P78357 MTURN-203ENST00000409688 843 ntTSL 2 BASIC31.21■■■□□ 2.59
CNTNAP1P78357 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC31.21■■■□□ 2.59
CNTNAP1P78357 AC010864.1-201ENST00000609407 1511 ntBASIC31.21■■■□□ 2.59
CNTNAP1P78357 KHDRBS3-201ENST00000355849 1977 ntAPPRIS P1 TSL 1 (best) BASIC31.19■■■□□ 2.58
CNTNAP1P78357 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC31.19■■■□□ 2.58
CNTNAP1P78357 AC004987.1-201ENST00000428627 508 ntBASIC31.18■■■□□ 2.58
CNTNAP1P78357 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC31.17■■■□□ 2.58
CNTNAP1P78357 HOXB3-210ENST00000489475 1845 ntTSL 2 BASIC31.17■■■□□ 2.58
CNTNAP1P78357 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC31.17■■■□□ 2.58
CNTNAP1P78357 ATP5G2P3-201ENST00000429083 425 ntBASIC31.17■■■□□ 2.58
CNTNAP1P78357 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC31.16■■■□□ 2.58
CNTNAP1P78357 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC31.16■■■□□ 2.58
CNTNAP1P78357 GUK1-208ENST00000366728 842 ntTSL 2 BASIC31.16■■■□□ 2.58
CNTNAP1P78357 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC31.16■■■□□ 2.58
CNTNAP1P78357 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC31.15■■■□□ 2.58
CNTNAP1P78357 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC31.15■■■□□ 2.58
CNTNAP1P78357 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC31.15■■■□□ 2.58
CNTNAP1P78357 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC31.15■■■□□ 2.58
CNTNAP1P78357 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC31.15■■■□□ 2.58
CNTNAP1P78357 GRASP-201ENST00000293662 1933 ntAPPRIS P1 TSL 1 (best) BASIC31.14■■■□□ 2.58
CNTNAP1P78357 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC31.13■■■□□ 2.57
CNTNAP1P78357 ATRNL1-209ENST00000609571 1818 ntTSL 1 (best) BASIC31.13■■■□□ 2.57
CNTNAP1P78357 ABHD17A-202ENST00000292577 1757 ntAPPRIS P1 TSL 1 (best) BASIC31.13■■■□□ 2.57
CNTNAP1P78357 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC31.12■■■□□ 2.57
CNTNAP1P78357 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC31.12■■■□□ 2.57
CNTNAP1P78357 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC31.12■■■□□ 2.57
CNTNAP1P78357 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC31.12■■■□□ 2.57
CNTNAP1P78357 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC31.11■■■□□ 2.57
CNTNAP1P78357 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC31.1■■■□□ 2.57
CNTNAP1P78357 KRT18P60-201ENST00000312876 1297 ntBASIC31.1■■■□□ 2.57
CNTNAP1P78357 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC31.1■■■□□ 2.57
CNTNAP1P78357 AL035685.1-201ENST00000636663 812 ntBASIC31.1■■■□□ 2.57
CNTNAP1P78357 LRRC61-202ENST00000359623 1877 ntAPPRIS P1 TSL 2 BASIC31.07■■■□□ 2.56
CNTNAP1P78357 EMID1-201ENST00000334018 2173 ntAPPRIS P1 TSL 1 (best) BASIC31.07■■■□□ 2.56
CNTNAP1P78357 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC31.06■■■□□ 2.56
CNTNAP1P78357 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC31.06■■■□□ 2.56
CNTNAP1P78357 MAPK12-201ENST00000215659 1918 ntAPPRIS P1 TSL 1 (best) BASIC31.06■■■□□ 2.56
CNTNAP1P78357 HES4-204ENST00000484667 667 ntTSL 3 BASIC31.05■■■□□ 2.56
CNTNAP1P78357 ELK4-201ENST00000289703 2118 ntTSL 1 (best) BASIC31.05■■■□□ 2.56
CNTNAP1P78357 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC31.05■■■□□ 2.56
CNTNAP1P78357 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC31.04■■■□□ 2.56
CNTNAP1P78357 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC31.03■■■□□ 2.56
CNTNAP1P78357 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC31.02■■■□□ 2.56
CNTNAP1P78357 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC31.02■■■□□ 2.56
CNTNAP1P78357 TRIR-205ENST00000592273 783 ntTSL 3 BASIC31.02■■■□□ 2.56
CNTNAP1P78357 HMX1-201ENST00000400677 1895 ntAPPRIS P1 TSL 1 (best) BASIC31.01■■■□□ 2.55
CNTNAP1P78357 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC31.01■■■□□ 2.55
CNTNAP1P78357 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC31■■■□□ 2.55
CNTNAP1P78357 FTCD-203ENST00000397746 1878 ntAPPRIS P1 TSL 1 (best) BASIC31■■■□□ 2.55
CNTNAP1P78357 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC30.99■■■□□ 2.55
CNTNAP1P78357 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC30.99■■■□□ 2.55
CNTNAP1P78357 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC30.99■■■□□ 2.55
CNTNAP1P78357 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC30.98■■■□□ 2.55
CNTNAP1P78357 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC30.98■■■□□ 2.55
CNTNAP1P78357 PANK2-207ENST00000610179 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC30.98■■■□□ 2.55
CNTNAP1P78357 FSD1L-204ENST00000469022 1836 ntTSL 1 (best) BASIC30.97■■■□□ 2.55
CNTNAP1P78357 MBOAT7-203ENST00000391754 1797 ntTSL 1 (best) BASIC30.97■■■□□ 2.55
CNTNAP1P78357 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC30.97■■■□□ 2.55
CNTNAP1P78357 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC30.97■■■□□ 2.55
CNTNAP1P78357 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC30.97■■■□□ 2.55
CNTNAP1P78357 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC30.96■■■□□ 2.55
CNTNAP1P78357 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC30.95■■■□□ 2.55
CNTNAP1P78357 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC30.95■■■□□ 2.55
CNTNAP1P78357 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC30.94■■■□□ 2.54
CNTNAP1P78357 AL451085.2-201ENST00000605085 799 ntBASIC30.94■■■□□ 2.54
CNTNAP1P78357 CARS2-201ENST00000257347 1879 ntAPPRIS P1 TSL 1 (best) BASIC30.94■■■□□ 2.54
CNTNAP1P78357 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC30.93■■■□□ 2.54
CNTNAP1P78357 AC127502.1-201ENST00000399971 1502 ntBASIC30.93■■■□□ 2.54
CNTNAP1P78357 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC30.92■■■□□ 2.54
CNTNAP1P78357 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC30.92■■■□□ 2.54
CNTNAP1P78357 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC30.91■■■□□ 2.54
CNTNAP1P78357 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC30.91■■■□□ 2.54
CNTNAP1P78357 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC30.9■■■□□ 2.54
CNTNAP1P78357 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC30.9■■■□□ 2.54
CNTNAP1P78357 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC30.89■■■□□ 2.54
CNTNAP1P78357 E2F4-201ENST00000379378 2096 ntAPPRIS P1 TSL 1 (best) BASIC30.89■■■□□ 2.54
CNTNAP1P78357 WHAMMP2-203ENST00000563942 1603 ntBASIC30.89■■■□□ 2.54
CNTNAP1P78357 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC30.89■■■□□ 2.54
CNTNAP1P78357 LMNTD2-201ENST00000329451 2084 ntAPPRIS P1 TSL 1 (best) BASIC30.89■■■□□ 2.54
CNTNAP1P78357 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC30.88■■■□□ 2.53
CNTNAP1P78357 ATRNL1-207ENST00000527407 1583 ntTSL 5 BASIC30.88■■■□□ 2.53
CNTNAP1P78357 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC30.88■■■□□ 2.53
CNTNAP1P78357 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC30.88■■■□□ 2.53
CNTNAP1P78357 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC30.88■■■□□ 2.53
CNTNAP1P78357 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC30.88■■■□□ 2.53
CNTNAP1P78357 AC060814.1-201ENST00000554326 538 ntBASIC30.88■■■□□ 2.53
CNTNAP1P78357 AC135983.2-203ENST00000454486 1613 ntBASIC30.88■■■□□ 2.53
CNTNAP1P78357 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC30.88■■■□□ 2.53
CNTNAP1P78357 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC30.88■■■□□ 2.53
CNTNAP1P78357 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC30.87■■■□□ 2.53
CNTNAP1P78357 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC30.86■■■□□ 2.53
CNTNAP1P78357 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC30.86■■■□□ 2.53
Retrieved 100 of 98,524 protein–RNA pairs in 17.4 ms