Protein–RNA interactions for Protein: P61969

Lmo4, LIM domain transcription factor LMO4, mousemouse

Predictions only

Length 165 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lmo4P61969 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC19.45■□□□□ 0.7
Lmo4P61969 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Lmo4P61969 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
Lmo4P61969 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC19.43■□□□□ 0.7
Lmo4P61969 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC19.43■□□□□ 0.7
Lmo4P61969 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Lmo4P61969 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Lmo4P61969 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC19.42■□□□□ 0.7
Lmo4P61969 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
Lmo4P61969 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Lmo4P61969 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Lmo4P61969 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Lmo4P61969 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Lmo4P61969 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Lmo4P61969 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Lmo4P61969 Gm37136-201ENSMUST00000194368 194 ntBASIC19.38■□□□□ 0.69
Lmo4P61969 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
Lmo4P61969 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC19.38■□□□□ 0.69
Lmo4P61969 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Lmo4P61969 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC19.37■□□□□ 0.69
Lmo4P61969 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Lmo4P61969 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Lmo4P61969 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Lmo4P61969 Gm4799-201ENSMUST00000095396 657 ntBASIC19.36■□□□□ 0.69
Lmo4P61969 Gm6206-201ENSMUST00000133472 2199 ntBASIC19.36■□□□□ 0.69
Lmo4P61969 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC19.36■□□□□ 0.69
Lmo4P61969 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Lmo4P61969 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
Lmo4P61969 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC19.35■□□□□ 0.69
Lmo4P61969 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Lmo4P61969 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Lmo4P61969 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Lmo4P61969 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Lmo4P61969 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Lmo4P61969 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Lmo4P61969 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Lmo4P61969 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Lmo4P61969 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
Lmo4P61969 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Lmo4P61969 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC19.32■□□□□ 0.68
Lmo4P61969 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Lmo4P61969 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Lmo4P61969 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Lmo4P61969 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC19.31■□□□□ 0.68
Lmo4P61969 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC19.3■□□□□ 0.68
Lmo4P61969 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
Lmo4P61969 AC154454.1-201ENSMUST00000225253 216 ntBASIC19.3■□□□□ 0.68
Lmo4P61969 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Lmo4P61969 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
Lmo4P61969 Mir3960-201ENSMUST00000198213 73 ntBASIC19.29■□□□□ 0.68
Lmo4P61969 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Lmo4P61969 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Lmo4P61969 Cap2-205ENSMUST00000225824 1634 ntBASIC19.29■□□□□ 0.68
Lmo4P61969 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Lmo4P61969 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Lmo4P61969 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Lmo4P61969 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC19.27■□□□□ 0.68
Lmo4P61969 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Lmo4P61969 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC19.27■□□□□ 0.68
Lmo4P61969 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Lmo4P61969 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Lmo4P61969 Scarna2-201ENSMUST00000157560 414 ntBASIC19.26■□□□□ 0.67
Lmo4P61969 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Lmo4P61969 Pkd1-207ENSMUST00000228550 1050 ntBASIC19.26■□□□□ 0.67
Lmo4P61969 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Lmo4P61969 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC19.25■□□□□ 0.67
Lmo4P61969 Gm45364-201ENSMUST00000210883 159 ntBASIC19.25■□□□□ 0.67
Lmo4P61969 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Lmo4P61969 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Lmo4P61969 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Lmo4P61969 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Lmo4P61969 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
Lmo4P61969 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Lmo4P61969 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
Lmo4P61969 Gm13889-201ENSMUST00000099689 1386 ntBASIC19.23■□□□□ 0.67
Lmo4P61969 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Lmo4P61969 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Lmo4P61969 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Lmo4P61969 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC19.22■□□□□ 0.67
Lmo4P61969 Gm9806-201ENSMUST00000051080 552 ntBASIC19.22■□□□□ 0.67
Lmo4P61969 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC19.21■□□□□ 0.67
Lmo4P61969 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Lmo4P61969 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Lmo4P61969 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Lmo4P61969 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Lmo4P61969 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Lmo4P61969 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Lmo4P61969 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Lmo4P61969 Gm11687-201ENSMUST00000118911 886 ntBASIC19.19■□□□□ 0.66
Lmo4P61969 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Lmo4P61969 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC19.19■□□□□ 0.66
Lmo4P61969 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
Lmo4P61969 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC19.18■□□□□ 0.66
Lmo4P61969 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC19.18■□□□□ 0.66
Lmo4P61969 Gm16437-201ENSMUST00000025669 507 ntBASIC19.18■□□□□ 0.66
Lmo4P61969 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Lmo4P61969 Gm12818-201ENSMUST00000117562 1349 ntBASIC19.18■□□□□ 0.66
Lmo4P61969 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Lmo4P61969 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Lmo4P61969 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC19.17■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 28.3 ms