Protein–RNA interactions for Protein: P61620

Sec61a1, Protein transport protein Sec61 subunit alpha isoform 1, mousemouse

Known RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61a1P61620 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Sec61a1P61620 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Sec61a1P61620 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC20.45■□□□□ 0.87
Sec61a1P61620 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
Sec61a1P61620 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Sec61a1P61620 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
Sec61a1P61620 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Sec61a1P61620 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Sec61a1P61620 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Sec61a1P61620 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Sec61a1P61620 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Sec61a1P61620 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Sec61a1P61620 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Sec61a1P61620 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Sec61a1P61620 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Sec61a1P61620 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Sec61a1P61620 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Sec61a1P61620 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Sec61a1P61620 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Sec61a1P61620 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
Sec61a1P61620 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Sec61a1P61620 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Sec61a1P61620 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Sec61a1P61620 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC20.4■□□□□ 0.86
Sec61a1P61620 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC20.39■□□□□ 0.86
Sec61a1P61620 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC20.39■□□□□ 0.85
Sec61a1P61620 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.85
Sec61a1P61620 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
Sec61a1P61620 Gm9939-201ENSMUST00000067161 1154 ntBASIC20.39■□□□□ 0.85
Sec61a1P61620 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Sec61a1P61620 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Sec61a1P61620 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Sec61a1P61620 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Sec61a1P61620 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Sec61a1P61620 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Sec61a1P61620 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Sec61a1P61620 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Sec61a1P61620 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Sec61a1P61620 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Sec61a1P61620 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
Sec61a1P61620 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Sec61a1P61620 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Sec61a1P61620 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Sec61a1P61620 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Sec61a1P61620 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Sec61a1P61620 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC20.35■□□□□ 0.85
Sec61a1P61620 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Sec61a1P61620 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC20.34■□□□□ 0.85
Sec61a1P61620 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Sec61a1P61620 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Sec61a1P61620 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Sec61a1P61620 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Sec61a1P61620 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Sec61a1P61620 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
Sec61a1P61620 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
Sec61a1P61620 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
Sec61a1P61620 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Sec61a1P61620 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
Sec61a1P61620 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Sec61a1P61620 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Sec61a1P61620 Gm17641-201ENSMUST00000166328 2350 ntBASIC20.31■□□□□ 0.84
Sec61a1P61620 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Sec61a1P61620 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Sec61a1P61620 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Sec61a1P61620 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
Sec61a1P61620 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Sec61a1P61620 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC20.29■□□□□ 0.84
Sec61a1P61620 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC20.29■□□□□ 0.84
Sec61a1P61620 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
Sec61a1P61620 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Sec61a1P61620 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
Sec61a1P61620 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Sec61a1P61620 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
Sec61a1P61620 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
Sec61a1P61620 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Sec61a1P61620 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Sec61a1P61620 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Sec61a1P61620 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Sec61a1P61620 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
Sec61a1P61620 Gm6821-201ENSMUST00000107540 542 ntBASIC20.27■□□□□ 0.84
Sec61a1P61620 Il17rd-202ENSMUST00000223942 2186 ntBASIC20.27■□□□□ 0.83
Sec61a1P61620 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Sec61a1P61620 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Sec61a1P61620 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Sec61a1P61620 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Sec61a1P61620 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Sec61a1P61620 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Sec61a1P61620 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
Sec61a1P61620 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Sec61a1P61620 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Sec61a1P61620 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC20.24■□□□□ 0.83
Sec61a1P61620 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
Sec61a1P61620 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC20.24■□□□□ 0.83
Sec61a1P61620 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Sec61a1P61620 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
Sec61a1P61620 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Sec61a1P61620 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Sec61a1P61620 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC20.23■□□□□ 0.83
Sec61a1P61620 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Sec61a1P61620 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 27.1 ms