Protein–RNA interactions for Protein: P61025

Cks1b, Cyclin-dependent kinases regulatory subunit 1, mousemouse

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cks1bP61025 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Cks1bP61025 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Cks1bP61025 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Cks1bP61025 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Cks1bP61025 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Cks1bP61025 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
Cks1bP61025 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC16.54■□□□□ 0.24
Cks1bP61025 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Cks1bP61025 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Cks1bP61025 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
Cks1bP61025 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Cks1bP61025 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Cks1bP61025 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Cks1bP61025 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC16.52■□□□□ 0.24
Cks1bP61025 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Cks1bP61025 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
Cks1bP61025 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
Cks1bP61025 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Cks1bP61025 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Cks1bP61025 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC16.51■□□□□ 0.23
Cks1bP61025 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
Cks1bP61025 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Cks1bP61025 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Cks1bP61025 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
Cks1bP61025 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Cks1bP61025 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Cks1bP61025 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC16.5■□□□□ 0.23
Cks1bP61025 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC16.49■□□□□ 0.23
Cks1bP61025 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Cks1bP61025 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
Cks1bP61025 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Cks1bP61025 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Cks1bP61025 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Cks1bP61025 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
Cks1bP61025 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Cks1bP61025 Gm6277-202ENSMUST00000224036 2779 ntBASIC16.47■□□□□ 0.23
Cks1bP61025 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Cks1bP61025 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
Cks1bP61025 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Cks1bP61025 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Cks1bP61025 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Cks1bP61025 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Cks1bP61025 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
Cks1bP61025 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC16.46■□□□□ 0.23
Cks1bP61025 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC16.46■□□□□ 0.22
Cks1bP61025 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Cks1bP61025 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Cks1bP61025 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Cks1bP61025 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Cks1bP61025 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Cks1bP61025 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Cks1bP61025 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
Cks1bP61025 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Cks1bP61025 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Cks1bP61025 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Cks1bP61025 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Cks1bP61025 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Cks1bP61025 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC16.43■□□□□ 0.22
Cks1bP61025 Peli2-204ENSMUST00000226513 1320 ntBASIC16.43■□□□□ 0.22
Cks1bP61025 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC16.42■□□□□ 0.22
Cks1bP61025 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Cks1bP61025 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Cks1bP61025 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Cks1bP61025 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
Cks1bP61025 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC16.41■□□□□ 0.22
Cks1bP61025 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Cks1bP61025 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC16.41■□□□□ 0.22
Cks1bP61025 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Cks1bP61025 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
Cks1bP61025 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Cks1bP61025 Notumos-201ENSMUST00000151998 2659 ntBASIC16.4■□□□□ 0.22
Cks1bP61025 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC16.4■□□□□ 0.22
Cks1bP61025 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC16.4■□□□□ 0.22
Cks1bP61025 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
Cks1bP61025 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Cks1bP61025 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
Cks1bP61025 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Cks1bP61025 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
Cks1bP61025 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Cks1bP61025 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Cks1bP61025 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Cks1bP61025 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC16.38■□□□□ 0.21
Cks1bP61025 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
Cks1bP61025 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
Cks1bP61025 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Cks1bP61025 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Cks1bP61025 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Cks1bP61025 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Cks1bP61025 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Cks1bP61025 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Cks1bP61025 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Cks1bP61025 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Cks1bP61025 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Cks1bP61025 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Cks1bP61025 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Cks1bP61025 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC16.36■□□□□ 0.21
Cks1bP61025 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Cks1bP61025 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Cks1bP61025 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
Cks1bP61025 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 37.3 ms