Protein–RNA interactions for Protein: P55316

FOXG1, Forkhead box protein G1, humanhuman

Predicted RBP Predictions only

Length 489 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXG1P55316 ABCB10P3-201ENST00000561950 2166 ntBASIC22.66■■□□□ 1.22
FOXG1P55316 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
FOXG1P55316 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC22.65■■□□□ 1.22
FOXG1P55316 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC22.65■■□□□ 1.22
FOXG1P55316 NGB-201ENST00000298352 1884 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
FOXG1P55316 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC22.64■■□□□ 1.21
FOXG1P55316 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
FOXG1P55316 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
FOXG1P55316 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC22.63■■□□□ 1.21
FOXG1P55316 PCSK6-201ENST00000331826 2309 ntTSL 5 BASIC22.63■■□□□ 1.21
FOXG1P55316 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
FOXG1P55316 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC22.62■■□□□ 1.21
FOXG1P55316 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC22.62■■□□□ 1.21
FOXG1P55316 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC22.62■■□□□ 1.21
FOXG1P55316 HOXD13-201ENST00000392539 2240 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
FOXG1P55316 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC22.61■■□□□ 1.21
FOXG1P55316 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC22.61■■□□□ 1.21
FOXG1P55316 CR559946.2-201ENST00000623684 991 ntBASIC22.61■■□□□ 1.21
FOXG1P55316 CHML-204ENST00000638121 920 ntTSL 2 BASIC22.61■■□□□ 1.21
FOXG1P55316 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
FOXG1P55316 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
FOXG1P55316 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC22.6■■□□□ 1.21
FOXG1P55316 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC22.6■■□□□ 1.21
FOXG1P55316 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
FOXG1P55316 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC22.59■■□□□ 1.21
FOXG1P55316 DUX4L13-201ENST00000554103 1267 ntBASIC22.59■■□□□ 1.21
FOXG1P55316 MIR3648-2-201ENST00000581792 180 ntBASIC22.59■■□□□ 1.21
FOXG1P55316 DUX4L15-201ENST00000611059 1267 ntBASIC22.59■■□□□ 1.21
FOXG1P55316 DUX4L23-201ENST00000615195 1269 ntBASIC22.59■■□□□ 1.21
FOXG1P55316 MIR3648-1-201ENST00000615959 180 ntBASIC22.59■■□□□ 1.21
FOXG1P55316 DUX4L24-201ENST00000617576 1269 ntBASIC22.59■■□□□ 1.21
FOXG1P55316 DUX4L22-201ENST00000618238 1269 ntBASIC22.59■■□□□ 1.21
FOXG1P55316 DUX4L20-201ENST00000619712 1269 ntBASIC22.59■■□□□ 1.21
FOXG1P55316 DUX4L21-201ENST00000622058 1269 ntBASIC22.59■■□□□ 1.21
FOXG1P55316 DUX4L10-201ENST00000622460 1267 ntBASIC22.59■■□□□ 1.21
FOXG1P55316 DUX4L25-201ENST00000624915 1269 ntBASIC22.59■■□□□ 1.21
FOXG1P55316 GDI1-215ENST00000630693 786 ntTSL 4 BASIC22.59■■□□□ 1.21
FOXG1P55316 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
FOXG1P55316 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
FOXG1P55316 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC22.59■■□□□ 1.21
FOXG1P55316 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC22.59■■□□□ 1.21
FOXG1P55316 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC22.58■■□□□ 1.21
FOXG1P55316 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC22.58■■□□□ 1.21
FOXG1P55316 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
FOXG1P55316 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC22.58■■□□□ 1.21
FOXG1P55316 RPS2-202ENST00000526522 924 ntTSL 2 BASIC22.58■■□□□ 1.21
FOXG1P55316 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
FOXG1P55316 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
FOXG1P55316 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC22.57■■□□□ 1.2
FOXG1P55316 AC016575.1-201ENST00000607026 382 ntBASIC22.57■■□□□ 1.2
FOXG1P55316 AC100797.4-201ENST00000631653 1827 ntBASIC22.57■■□□□ 1.2
FOXG1P55316 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC22.57■■□□□ 1.2
FOXG1P55316 AP004833.2-201ENST00000532228 1454 ntBASIC22.56■■□□□ 1.2
FOXG1P55316 MACF1-219ENST00000484793 834 ntTSL 2 BASIC22.56■■□□□ 1.2
FOXG1P55316 MBP-237ENST00000579129 1052 ntTSL 5 BASIC22.56■■□□□ 1.2
FOXG1P55316 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC22.56■■□□□ 1.2
FOXG1P55316 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
FOXG1P55316 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
FOXG1P55316 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC22.55■■□□□ 1.2
FOXG1P55316 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC22.55■■□□□ 1.2
FOXG1P55316 EFNA1-202ENST00000368407 1926 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
FOXG1P55316 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC22.55■■□□□ 1.2
FOXG1P55316 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
FOXG1P55316 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC22.55■■□□□ 1.2
FOXG1P55316 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC22.55■■□□□ 1.2
FOXG1P55316 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC22.54■■□□□ 1.2
FOXG1P55316 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC22.54■■□□□ 1.2
FOXG1P55316 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
FOXG1P55316 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC22.54■■□□□ 1.2
FOXG1P55316 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC22.54■■□□□ 1.2
FOXG1P55316 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
FOXG1P55316 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
FOXG1P55316 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC22.54■■□□□ 1.2
FOXG1P55316 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC22.53■■□□□ 1.2
FOXG1P55316 HLA-V-202ENST00000446817 847 ntBASIC22.53■■□□□ 1.2
FOXG1P55316 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
FOXG1P55316 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC22.52■■□□□ 1.2
FOXG1P55316 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
FOXG1P55316 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC22.52■■□□□ 1.2
FOXG1P55316 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC22.52■■□□□ 1.2
FOXG1P55316 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC22.52■■□□□ 1.2
FOXG1P55316 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
FOXG1P55316 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
FOXG1P55316 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC22.51■■□□□ 1.19
FOXG1P55316 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC22.51■■□□□ 1.19
FOXG1P55316 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
FOXG1P55316 HES6-205ENST00000409356 528 ntTSL 2 BASIC22.51■■□□□ 1.19
FOXG1P55316 AGPS-202ENST00000409888 815 ntTSL 4 BASIC22.51■■□□□ 1.19
FOXG1P55316 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
FOXG1P55316 MEST-211ENST00000437945 1455 ntTSL 5 BASIC22.51■■□□□ 1.19
FOXG1P55316 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC22.5■■□□□ 1.19
FOXG1P55316 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
FOXG1P55316 CAPNS1-201ENST00000246533 1918 ntAPPRIS P2 TSL 1 (best) BASIC22.49■■□□□ 1.19
FOXG1P55316 TESK1-206ENST00000620767 2438 ntAPPRIS P1 TSL 5 BASIC22.49■■□□□ 1.19
FOXG1P55316 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
FOXG1P55316 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC22.49■■□□□ 1.19
FOXG1P55316 BIN1-204ENST00000348750 2074 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
FOXG1P55316 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
FOXG1P55316 CHST11-202ENST00000546689 756 ntTSL 2 BASIC22.48■■□□□ 1.19
FOXG1P55316 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC22.47■■□□□ 1.19
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms