Protein–RNA interactions for Protein: P55286

CDH8, Cadherin-8, humanhuman

Predictions only

Length 799 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8P55286 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC27.53■■■□□ 2
CDH8P55286 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC27.53■■■□□ 2
CDH8P55286 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC27.53■■■□□ 2
CDH8P55286 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC27.52■■■□□ 2
CDH8P55286 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC27.52■■■□□ 2
CDH8P55286 PVT1-219ENST00000523427 938 ntTSL 3 BASIC27.52■■■□□ 2
CDH8P55286 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC27.52■■■□□ 2
CDH8P55286 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC27.51■■□□□ 1.99
CDH8P55286 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC27.51■■□□□ 1.99
CDH8P55286 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC27.51■■□□□ 1.99
CDH8P55286 DUX4L11-201ENST00000611504 1267 ntBASIC27.5■■□□□ 1.99
CDH8P55286 DUX4L12-201ENST00000614593 1267 ntBASIC27.5■■□□□ 1.99
CDH8P55286 DUX4L14-201ENST00000621227 1267 ntBASIC27.5■■□□□ 1.99
CDH8P55286 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC27.5■■□□□ 1.99
CDH8P55286 AP004833.2-201ENST00000532228 1454 ntBASIC27.5■■□□□ 1.99
CDH8P55286 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC27.49■■□□□ 1.99
CDH8P55286 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC27.49■■□□□ 1.99
CDH8P55286 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC27.49■■□□□ 1.99
CDH8P55286 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC27.48■■□□□ 1.99
CDH8P55286 TESK1-206ENST00000620767 2438 ntAPPRIS P1 TSL 5 BASIC27.48■■□□□ 1.99
CDH8P55286 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC27.48■■□□□ 1.99
CDH8P55286 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC27.48■■□□□ 1.99
CDH8P55286 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC27.48■■□□□ 1.99
CDH8P55286 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC27.48■■□□□ 1.99
CDH8P55286 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC27.48■■□□□ 1.99
CDH8P55286 BIN1-204ENST00000348750 2074 ntTSL 1 (best) BASIC27.47■■□□□ 1.99
CDH8P55286 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC27.47■■□□□ 1.99
CDH8P55286 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC27.47■■□□□ 1.99
CDH8P55286 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC27.47■■□□□ 1.99
CDH8P55286 AC100797.4-201ENST00000631653 1827 ntBASIC27.46■■□□□ 1.99
CDH8P55286 TPRA1-209ENST00000489960 1903 ntAPPRIS P1 TSL 5 BASIC27.46■■□□□ 1.99
CDH8P55286 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC27.46■■□□□ 1.99
CDH8P55286 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC27.45■■□□□ 1.98
CDH8P55286 MAPK13-201ENST00000211287 2052 ntAPPRIS P1 TSL 1 (best) BASIC27.45■■□□□ 1.98
CDH8P55286 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC27.44■■□□□ 1.98
CDH8P55286 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC27.44■■□□□ 1.98
CDH8P55286 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC27.44■■□□□ 1.98
CDH8P55286 RNF166-209ENST00000567844 633 ntTSL 5 BASIC27.44■■□□□ 1.98
CDH8P55286 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC27.44■■□□□ 1.98
CDH8P55286 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC27.43■■□□□ 1.98
CDH8P55286 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC27.43■■□□□ 1.98
CDH8P55286 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC27.43■■□□□ 1.98
CDH8P55286 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC27.43■■□□□ 1.98
CDH8P55286 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC27.42■■□□□ 1.98
CDH8P55286 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC27.42■■□□□ 1.98
CDH8P55286 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC27.42■■□□□ 1.98
CDH8P55286 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC27.42■■□□□ 1.98
CDH8P55286 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC27.42■■□□□ 1.98
CDH8P55286 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC27.42■■□□□ 1.98
CDH8P55286 CHML-204ENST00000638121 920 ntTSL 2 BASIC27.42■■□□□ 1.98
CDH8P55286 ST6GALNAC6-203ENST00000373142 2448 ntTSL 1 (best) BASIC27.42■■□□□ 1.98
CDH8P55286 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC27.42■■□□□ 1.98
CDH8P55286 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC27.41■■□□□ 1.98
CDH8P55286 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC27.41■■□□□ 1.98
CDH8P55286 EFNA1-202ENST00000368407 1926 ntAPPRIS P1 TSL 1 (best) BASIC27.41■■□□□ 1.98
CDH8P55286 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC27.41■■□□□ 1.98
CDH8P55286 TPRA1-202ENST00000355552 1933 ntAPPRIS P1 TSL 1 (best) BASIC27.41■■□□□ 1.98
CDH8P55286 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC27.4■■□□□ 1.98
CDH8P55286 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC27.4■■□□□ 1.98
CDH8P55286 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC27.4■■□□□ 1.98
CDH8P55286 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC27.4■■□□□ 1.98
CDH8P55286 MEST-211ENST00000437945 1455 ntTSL 5 BASIC27.39■■□□□ 1.98
CDH8P55286 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC27.39■■□□□ 1.98
CDH8P55286 DUX4L13-201ENST00000554103 1267 ntBASIC27.39■■□□□ 1.98
CDH8P55286 DUX4L15-201ENST00000611059 1267 ntBASIC27.39■■□□□ 1.98
CDH8P55286 DUX4L23-201ENST00000615195 1269 ntBASIC27.39■■□□□ 1.98
CDH8P55286 DUX4L24-201ENST00000617576 1269 ntBASIC27.39■■□□□ 1.98
CDH8P55286 DUX4L22-201ENST00000618238 1269 ntBASIC27.39■■□□□ 1.98
CDH8P55286 DUX4L20-201ENST00000619712 1269 ntBASIC27.39■■□□□ 1.98
CDH8P55286 DUX4L21-201ENST00000622058 1269 ntBASIC27.39■■□□□ 1.98
CDH8P55286 DUX4L10-201ENST00000622460 1267 ntBASIC27.39■■□□□ 1.98
CDH8P55286 DUX4L25-201ENST00000624915 1269 ntBASIC27.39■■□□□ 1.98
CDH8P55286 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC27.38■■□□□ 1.97
CDH8P55286 WSB2-201ENST00000315436 2646 ntAPPRIS P1 TSL 1 (best) BASIC27.37■■□□□ 1.97
CDH8P55286 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC27.37■■□□□ 1.97
CDH8P55286 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC27.37■■□□□ 1.97
CDH8P55286 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC27.37■■□□□ 1.97
CDH8P55286 EXOC3L4-201ENST00000380069 2293 ntAPPRIS P1 TSL 1 (best) BASIC27.37■■□□□ 1.97
CDH8P55286 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC27.36■■□□□ 1.97
CDH8P55286 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC27.36■■□□□ 1.97
CDH8P55286 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC27.36■■□□□ 1.97
CDH8P55286 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC27.35■■□□□ 1.97
CDH8P55286 CR559946.2-201ENST00000623684 991 ntBASIC27.35■■□□□ 1.97
CDH8P55286 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC27.34■■□□□ 1.97
CDH8P55286 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC27.34■■□□□ 1.97
CDH8P55286 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC27.34■■□□□ 1.97
CDH8P55286 MIR3648-2-201ENST00000581792 180 ntBASIC27.34■■□□□ 1.97
CDH8P55286 MIR3648-1-201ENST00000615959 180 ntBASIC27.34■■□□□ 1.97
CDH8P55286 GDI1-215ENST00000630693 786 ntTSL 4 BASIC27.34■■□□□ 1.97
CDH8P55286 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC27.34■■□□□ 1.97
CDH8P55286 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC27.34■■□□□ 1.97
CDH8P55286 SHF-206ENST00000560471 2499 ntTSL 5 BASIC27.34■■□□□ 1.97
CDH8P55286 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC27.33■■□□□ 1.97
CDH8P55286 SNX24-201ENST00000261369 2158 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.97
CDH8P55286 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC27.33■■□□□ 1.97
CDH8P55286 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC27.33■■□□□ 1.97
CDH8P55286 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC27.32■■□□□ 1.96
CDH8P55286 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC27.31■■□□□ 1.96
CDH8P55286 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC27.31■■□□□ 1.96
CDH8P55286 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
Retrieved 100 of 98,524 protein–RNA pairs in 25.1 ms