Protein–RNA interactions for Protein: P55056

APOC4, Apolipoprotein C-IV, humanhuman

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC4P55056 METRNL-202ENST00000570778 967 ntTSL 5 BASIC18.84■□□□□ 0.61
APOC4P55056 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC18.84■□□□□ 0.61
APOC4P55056 TSPAN33-201ENST00000486685 1863 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
APOC4P55056 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
APOC4P55056 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC18.83■□□□□ 0.61
APOC4P55056 ST7-208ENST00000393451 2110 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
APOC4P55056 WHAMMP2-203ENST00000563942 1603 ntBASIC18.83■□□□□ 0.61
APOC4P55056 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
APOC4P55056 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
APOC4P55056 COL13A1-210ENST00000517713 2007 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
APOC4P55056 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
APOC4P55056 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
APOC4P55056 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
APOC4P55056 GNAI2-202ENST00000313601 2464 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
APOC4P55056 CBLN1-201ENST00000219197 2435 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
APOC4P55056 TPRG1L-202ENST00000378344 2414 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
APOC4P55056 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
APOC4P55056 ZNF787-203ENST00000610935 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
APOC4P55056 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
APOC4P55056 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC18.8■□□□□ 0.6
APOC4P55056 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
APOC4P55056 AC008813.1-201ENST00000536597 885 ntBASIC18.8■□□□□ 0.6
APOC4P55056 MEST-211ENST00000437945 1455 ntTSL 5 BASIC18.79■□□□□ 0.6
APOC4P55056 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
APOC4P55056 TM6SF1-202ENST00000322019 2074 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
APOC4P55056 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
APOC4P55056 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
APOC4P55056 TPM2-203ENST00000378292 2147 ntAPPRIS ALT1 TSL 1 (best) BASIC18.79■□□□□ 0.6
APOC4P55056 IRX1-201ENST00000302006 1858 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
APOC4P55056 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
APOC4P55056 TXNRD2-204ENST00000400521 2115 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
APOC4P55056 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC18.78■□□□□ 0.6
APOC4P55056 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
APOC4P55056 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
APOC4P55056 AP004833.2-201ENST00000532228 1454 ntBASIC18.77■□□□□ 0.6
APOC4P55056 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
APOC4P55056 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
APOC4P55056 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
APOC4P55056 FTCD-204ENST00000397748 1955 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
APOC4P55056 SLC16A11-201ENST00000308009 1803 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.59
APOC4P55056 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
APOC4P55056 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
APOC4P55056 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
APOC4P55056 ZNF513-201ENST00000323703 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
APOC4P55056 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC18.76■□□□□ 0.59
APOC4P55056 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
APOC4P55056 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC18.76■□□□□ 0.59
APOC4P55056 AC110285.7-201ENST00000624417 1536 ntBASIC18.75■□□□□ 0.59
APOC4P55056 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
APOC4P55056 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
APOC4P55056 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
APOC4P55056 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC18.75■□□□□ 0.59
APOC4P55056 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
APOC4P55056 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
APOC4P55056 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
APOC4P55056 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
APOC4P55056 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
APOC4P55056 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
APOC4P55056 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
APOC4P55056 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
APOC4P55056 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
APOC4P55056 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC18.74■□□□□ 0.59
APOC4P55056 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC18.74■□□□□ 0.59
APOC4P55056 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
APOC4P55056 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC18.73■□□□□ 0.59
APOC4P55056 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
APOC4P55056 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
APOC4P55056 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC18.73■□□□□ 0.59
APOC4P55056 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC18.73■□□□□ 0.59
APOC4P55056 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC18.73■□□□□ 0.59
APOC4P55056 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
APOC4P55056 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
APOC4P55056 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
APOC4P55056 RASSF8-202ENST00000381352 2320 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
APOC4P55056 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC18.72■□□□□ 0.59
APOC4P55056 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
APOC4P55056 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC18.72■□□□□ 0.59
APOC4P55056 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC18.72■□□□□ 0.59
APOC4P55056 NRXN1-228ENST00000628364 2444 ntTSL 5 BASIC18.72■□□□□ 0.59
APOC4P55056 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
APOC4P55056 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC18.7■□□□□ 0.58
APOC4P55056 TPT1-202ENST00000379055 948 ntTSL 2 BASIC18.7■□□□□ 0.58
APOC4P55056 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
APOC4P55056 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC18.69■□□□□ 0.58
APOC4P55056 PHOX2A-201ENST00000298231 1699 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
APOC4P55056 AMN-201ENST00000299155 1907 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
APOC4P55056 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
APOC4P55056 YAP1-204ENST00000526343 2393 ntTSL 5 BASIC18.68■□□□□ 0.58
APOC4P55056 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
APOC4P55056 ABHD17AP3-201ENST00000503096 1137 ntBASIC18.68■□□□□ 0.58
APOC4P55056 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
APOC4P55056 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC18.68■□□□□ 0.58
APOC4P55056 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
APOC4P55056 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
APOC4P55056 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
APOC4P55056 ST7-205ENST00000393446 2114 ntTSL 5 BASIC18.67■□□□□ 0.58
APOC4P55056 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC18.67■□□□□ 0.58
APOC4P55056 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC18.67■□□□□ 0.58
APOC4P55056 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
APOC4P55056 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 82.3 ms