Protein–RNA interactions for Protein: P54823

Ddx6, Probable ATP-dependent RNA helicase DDX6, mousemouse

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx6P54823 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
Ddx6P54823 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC24.35■■□□□ 1.49
Ddx6P54823 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
Ddx6P54823 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
Ddx6P54823 Gm37136-201ENSMUST00000194368 194 ntBASIC24.34■■□□□ 1.49
Ddx6P54823 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
Ddx6P54823 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC24.34■■□□□ 1.49
Ddx6P54823 Gm43445-201ENSMUST00000198564 2091 ntBASIC24.33■■□□□ 1.49
Ddx6P54823 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
Ddx6P54823 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
Ddx6P54823 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.48
Ddx6P54823 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
Ddx6P54823 AC154454.1-201ENSMUST00000225253 216 ntBASIC24.32■■□□□ 1.48
Ddx6P54823 Gm4799-201ENSMUST00000095396 657 ntBASIC24.32■■□□□ 1.48
Ddx6P54823 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
Ddx6P54823 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC24.31■■□□□ 1.48
Ddx6P54823 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
Ddx6P54823 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
Ddx6P54823 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC24.29■■□□□ 1.48
Ddx6P54823 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC24.28■■□□□ 1.48
Ddx6P54823 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
Ddx6P54823 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
Ddx6P54823 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
Ddx6P54823 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
Ddx6P54823 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC24.27■■□□□ 1.48
Ddx6P54823 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
Ddx6P54823 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
Ddx6P54823 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
Ddx6P54823 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC24.26■■□□□ 1.47
Ddx6P54823 Mir3960-201ENSMUST00000198213 73 ntBASIC24.26■■□□□ 1.47
Ddx6P54823 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC24.26■■□□□ 1.47
Ddx6P54823 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC24.26■■□□□ 1.47
Ddx6P54823 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC24.26■■□□□ 1.47
Ddx6P54823 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC24.26■■□□□ 1.47
Ddx6P54823 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC24.26■■□□□ 1.47
Ddx6P54823 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC24.25■■□□□ 1.47
Ddx6P54823 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
Ddx6P54823 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
Ddx6P54823 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC24.25■■□□□ 1.47
Ddx6P54823 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC24.25■■□□□ 1.47
Ddx6P54823 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC24.25■■□□□ 1.47
Ddx6P54823 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
Ddx6P54823 Pkd1-207ENSMUST00000228550 1050 ntBASIC24.24■■□□□ 1.47
Ddx6P54823 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC24.23■■□□□ 1.47
Ddx6P54823 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC24.23■■□□□ 1.47
Ddx6P54823 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
Ddx6P54823 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
Ddx6P54823 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
Ddx6P54823 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
Ddx6P54823 Cap2-205ENSMUST00000225824 1634 ntBASIC24.21■■□□□ 1.47
Ddx6P54823 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC24.21■■□□□ 1.47
Ddx6P54823 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC24.21■■□□□ 1.47
Ddx6P54823 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
Ddx6P54823 Gm13889-201ENSMUST00000099689 1386 ntBASIC24.19■■□□□ 1.46
Ddx6P54823 Scarna2-201ENSMUST00000157560 414 ntBASIC24.19■■□□□ 1.46
Ddx6P54823 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC24.18■■□□□ 1.46
Ddx6P54823 Gm9806-201ENSMUST00000051080 552 ntBASIC24.18■■□□□ 1.46
Ddx6P54823 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC24.18■■□□□ 1.46
Ddx6P54823 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC24.17■■□□□ 1.46
Ddx6P54823 Gm11687-201ENSMUST00000118911 886 ntBASIC24.17■■□□□ 1.46
Ddx6P54823 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC24.17■■□□□ 1.46
Ddx6P54823 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC24.17■■□□□ 1.46
Ddx6P54823 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC24.16■■□□□ 1.46
Ddx6P54823 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
Ddx6P54823 Gm45364-201ENSMUST00000210883 159 ntBASIC24.16■■□□□ 1.46
Ddx6P54823 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC24.15■■□□□ 1.46
Ddx6P54823 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
Ddx6P54823 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC24.14■■□□□ 1.45
Ddx6P54823 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC24.14■■□□□ 1.45
Ddx6P54823 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC24.13■■□□□ 1.45
Ddx6P54823 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
Ddx6P54823 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC24.13■■□□□ 1.45
Ddx6P54823 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC24.13■■□□□ 1.45
Ddx6P54823 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC24.13■■□□□ 1.45
Ddx6P54823 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
Ddx6P54823 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC24.13■■□□□ 1.45
Ddx6P54823 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
Ddx6P54823 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC24.12■■□□□ 1.45
Ddx6P54823 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC24.12■■□□□ 1.45
Ddx6P54823 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC24.12■■□□□ 1.45
Ddx6P54823 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
Ddx6P54823 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
Ddx6P54823 Gm12818-201ENSMUST00000117562 1349 ntBASIC24.1■■□□□ 1.45
Ddx6P54823 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
Ddx6P54823 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
Ddx6P54823 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
Ddx6P54823 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
Ddx6P54823 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
Ddx6P54823 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC24.09■■□□□ 1.45
Ddx6P54823 Gm16437-201ENSMUST00000025669 507 ntBASIC24.08■■□□□ 1.45
Ddx6P54823 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC24.08■■□□□ 1.44
Ddx6P54823 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC24.07■■□□□ 1.44
Ddx6P54823 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC24.07■■□□□ 1.44
Ddx6P54823 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
Ddx6P54823 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC24.07■■□□□ 1.44
Ddx6P54823 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC24.06■■□□□ 1.44
Ddx6P54823 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC24.06■■□□□ 1.44
Ddx6P54823 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC24.05■■□□□ 1.44
Ddx6P54823 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
Ddx6P54823 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC24.05■■□□□ 1.44
Retrieved 100 of 76,532 protein–RNA pairs in 8.1 ms