Protein–RNA interactions for Protein: P53960

YNL040W, Putative alanyl-tRNA editing protein alaX, yeastyeast

Predicted RBP Predictions only

Length 456 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
YNL040WP53960 YPL108WYPL108W 507 nt8.36□□□□□ -1.07
YNL040WP53960 RIB1YBL033C 1038 nt8.35□□□□□ -1.07
YNL040WP53960 YMR166CYMR166C 1107 nt8.35□□□□□ -1.07
YNL040WP53960 CHS7YHR142W 951 nt8.34□□□□□ -1.07
YNL040WP53960 YJL009WYJL009W 327 nt8.34□□□□□ -1.07
YNL040WP53960 RNA170RNA170 169 nt8.34□□□□□ -1.07
YNL040WP53960 BUB2YMR055C 921 nt8.34□□□□□ -1.07
YNL040WP53960 FCY1YPR062W 477 nt8.34□□□□□ -1.07
YNL040WP53960 YBR056WYBR056W 1506 nt8.34□□□□□ -1.08
YNL040WP53960 ILV2YMR108W 2064 nt8.33□□□□□ -1.08
YNL040WP53960 ERG6YML008C 1152 nt8.33□□□□□ -1.08
YNL040WP53960 YMR007WYMR007W 381 nt8.32□□□□□ -1.08
YNL040WP53960 LSP1YPL004C 1026 nt8.32□□□□□ -1.08
YNL040WP53960 GAL2YLR081W 1725 nt8.32□□□□□ -1.08
YNL040WP53960 DIA4YHR011W 1341 nt8.31□□□□□ -1.08
YNL040WP53960 OCH1YGL038C 1443 nt8.31□□□□□ -1.08
YNL040WP53960 CAK1YFL029C 1107 nt8.31□□□□□ -1.08
YNL040WP53960 OLA1YBR025C 1185 nt8.31□□□□□ -1.08
YNL040WP53960 YIA6YIL006W 1122 nt8.3□□□□□ -1.08
YNL040WP53960 PFS2YNL317W 1398 nt8.3□□□□□ -1.08
YNL040WP53960 MEP1YGR121C 1479 nt8.3□□□□□ -1.08
YNL040WP53960 PDC6YGR087C 1692 nt8.3□□□□□ -1.08
YNL040WP53960 HIS3YOR202W 663 nt8.29□□□□□ -1.08
YNL040WP53960 HSV2YGR223C 1347 nt8.29□□□□□ -1.08
YNL040WP53960 SOD2YHR008C 702 nt8.28□□□□□ -1.08
YNL040WP53960 ESBP6YNL125C 2022 nt8.28□□□□□ -1.08
YNL040WP53960 GTB1YDR221W 2109 nt8.27□□□□□ -1.08
YNL040WP53960 RRT14YIL127C 621 nt8.27□□□□□ -1.09
YNL040WP53960 MDH2YOL126C 1134 nt8.27□□□□□ -1.09
YNL040WP53960 YJL160CYJL160C 864 nt8.26□□□□□ -1.09
YNL040WP53960 LPD1YFL018C 1500 nt8.25□□□□□ -1.09
YNL040WP53960 RCR1YBR005W 642 nt8.25□□□□□ -1.09
YNL040WP53960 YRF1-3YGR296W 5580 nt8.25□□□□□ -1.09
YNL040WP53960 YRF1-6YNL339C 5580 nt8.25□□□□□ -1.09
YNL040WP53960 YRF1-7YPL283C 5580 nt8.25□□□□□ -1.09
YNL040WP53960 PET18YCR020C 648 nt8.23□□□□□ -1.09
YNL040WP53960 RHO1YPR165W 630 nt8.22□□□□□ -1.09
YNL040WP53960 PMT7YDR307W 1989 nt8.22□□□□□ -1.09
YNL040WP53960 RFC1YOR217W 2586 nt8.21□□□□□ -1.1
YNL040WP53960 EHT1YBR177C 1356 nt8.21□□□□□ -1.1
YNL040WP53960 LRO1YNR008W 1986 nt8.21□□□□□ -1.1
YNL040WP53960 YER152W-AYER152W-A 567 nt8.2□□□□□ -1.1
YNL040WP53960 MRN1YPL184C 1839 nt8.19□□□□□ -1.1
YNL040WP53960 NDE2YDL085W 1638 nt8.18□□□□□ -1.1
YNL040WP53960 YER156CYER156C 1017 nt8.18□□□□□ -1.1
YNL040WP53960 BXI1YNL305C 894 nt8.18□□□□□ -1.1
YNL040WP53960 SHC1YER096W 1539 nt8.18□□□□□ -1.1
YNL040WP53960 THI73YLR004C 1572 nt8.18□□□□□ -1.1
YNL040WP53960 INO1YJL153C 1602 nt8.18□□□□□ -1.1
YNL040WP53960 YPT31YER031C 672 nt8.17□□□□□ -1.1
YNL040WP53960 PUP3YER094C 618 nt8.17□□□□□ -1.1
YNL040WP53960 BUD31YCR063W 474 nt8.16□□□□□ -1.1
YNL040WP53960 SLM3YDL033C 1254 nt8.16□□□□□ -1.1
YNL040WP53960 YIL177CYIL177C 5277 nt8.15□□□□□ -1.1
YNL040WP53960 RPS6AYPL090C 711 nt8.15□□□□□ -1.1
YNL040WP53960 RPS6BYBR181C 711 nt8.15□□□□□ -1.1
YNL040WP53960 DIP5YPL265W 1827 nt8.14□□□□□ -1.11
YNL040WP53960 DTR1YBR180W 1719 nt8.14□□□□□ -1.11
YNL040WP53960 TIF3YPR163C 1311 nt8.13□□□□□ -1.11
YNL040WP53960 BSP1YPR171W 1731 nt8.13□□□□□ -1.11
YNL040WP53960 RCF1YML030W 480 nt8.13□□□□□ -1.11
YNL040WP53960 YNL140CYNL140C 570 nt8.13□□□□□ -1.11
YNL040WP53960 YPR084WYPR084W 1371 nt8.12□□□□□ -1.11
YNL040WP53960 UTR5YEL035C 501 nt8.12□□□□□ -1.11
YNL040WP53960 GLY1YEL046C 1164 nt8.12□□□□□ -1.11
YNL040WP53960 AIM34YMR003W 597 nt8.12□□□□□ -1.11
YNL040WP53960 HXT8YJL214W 1710 nt8.12□□□□□ -1.11
YNL040WP53960 YHL030W-AYHL030W-A 462 nt8.11□□□□□ -1.11
YNL040WP53960 MFT1YML062C 1179 nt8.11□□□□□ -1.11
YNL040WP53960 MET13YGL125W 1803 nt8.1□□□□□ -1.11
YNL040WP53960 ATP2YJR121W 1536 nt8.1□□□□□ -1.11
YNL040WP53960 TDA4YJR116W 840 nt8.1□□□□□ -1.11
YNL040WP53960 YMR206WYMR206W 942 nt8.1□□□□□ -1.11
YNL040WP53960 TGL5YOR081C 2250 nt8.1□□□□□ -1.11
YNL040WP53960 WSC4YHL028W 1818 nt8.1□□□□□ -1.11
YNL040WP53960 YNL190WYNL190W 615 nt8.09□□□□□ -1.11
YNL040WP53960 TIM50YPL063W 1431 nt8.09□□□□□ -1.11
YNL040WP53960 MET30YIL046W 1923 nt8.09□□□□□ -1.11
YNL040WP53960 INM1YHR046C 888 nt8.08□□□□□ -1.12
YNL040WP53960 YPL264CYPL264C 1062 nt8.08□□□□□ -1.12
YNL040WP53960 PRC1YMR297W 1599 nt8.08□□□□□ -1.12
YNL040WP53960 WSC3YOL105C 1671 nt8.08□□□□□ -1.12
YNL040WP53960 CHA1YCL064C 1083 nt8.07□□□□□ -1.12
YNL040WP53960 PRE10YOR362C 867 nt8.07□□□□□ -1.12
YNL040WP53960 JHD1YER051W 1479 nt8.06□□□□□ -1.12
YNL040WP53960 ADA2YDR448W 1305 nt8.06□□□□□ -1.12
YNL040WP53960 ARO3YDR035W 1113 nt8.06□□□□□ -1.12
YNL040WP53960 BUD20YLR074C 501 nt8.06□□□□□ -1.12
YNL040WP53960 LAS17YOR181W 1902 nt8.05□□□□□ -1.12
YNL040WP53960 YGR137WYGR137W 375 nt8.05□□□□□ -1.12
YNL040WP53960 ALG7YBR243C 1347 nt8.04□□□□□ -1.12
YNL040WP53960 GRH1YDR517W 1119 nt8.04□□□□□ -1.12
YNL040WP53960 PMU1YKL128C 888 nt8.04□□□□□ -1.12
YNL040WP53960 ITR1YDR497C 1755 nt8.04□□□□□ -1.12
YNL040WP53960 YEL034C-AYEL034C-A 603 nt8.03□□□□□ -1.12
YNL040WP53960 MRP7YNL005C 1116 nt8.03□□□□□ -1.12
YNL040WP53960 SGF73YGL066W 1974 nt8.02□□□□□ -1.12
YNL040WP53960 RPL2AYFR031C-A 765 nt8.02□□□□□ -1.13
YNL040WP53960 TOK1YJL093C 2076 nt8.02□□□□□ -1.13
YNL040WP53960 HXT9YJL219W 1704 nt8.01□□□□□ -1.13
Retrieved 100 of 7,029 protein–RNA pairs in 17.3 ms