Protein–RNA interactions for Protein: P53840

TOF1, Topoisomerase 1-associated factor 1, yeastyeast

Predictions only

Length 1,238 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TOF1P53840 tD(GUC)J4tD(GUC)J4 72 nt8.77□□□□□ -1.01
TOF1P53840 tD(GUC)KtD(GUC)K 72 nt8.77□□□□□ -1.01
TOF1P53840 tD(GUC)L1tD(GUC)L1 72 nt8.77□□□□□ -1.01
TOF1P53840 tD(GUC)L2tD(GUC)L2 72 nt8.77□□□□□ -1.01
TOF1P53840 tD(GUC)MtD(GUC)M 72 nt8.77□□□□□ -1.01
TOF1P53840 tD(GUC)OtD(GUC)O 72 nt8.77□□□□□ -1.01
TOF1P53840 RRT14YIL127C 621 nt8.77□□□□□ -1.01
TOF1P53840 YIR035CYIR035C 765 nt8.77□□□□□ -1.01
TOF1P53840 PDC6YGR087C 1692 nt8.77□□□□□ -1.01
TOF1P53840 YOR072WYOR072W 315 nt8.76□□□□□ -1.01
TOF1P53840 GTB1YDR221W 2109 nt8.74□□□□□ -1.01
TOF1P53840 RSC4YKR008W 1878 nt8.73□□□□□ -1.01
TOF1P53840 snR86snR86 1004 nt8.73□□□□□ -1.01
TOF1P53840 YER156CYER156C 1017 nt8.73□□□□□ -1.01
TOF1P53840 YJR149WYJR149W 1215 nt8.73□□□□□ -1.01
TOF1P53840 MIM1YOL026C 342 nt8.73□□□□□ -1.01
TOF1P53840 GAL2YLR081W 1725 nt8.73□□□□□ -1.01
TOF1P53840 YBR056WYBR056W 1506 nt8.73□□□□□ -1.01
TOF1P53840 BUB2YMR055C 921 nt8.72□□□□□ -1.01
TOF1P53840 OLA1YBR025C 1185 nt8.72□□□□□ -1.01
TOF1P53840 YRF1-3YGR296W 5580 nt8.72□□□□□ -1.01
TOF1P53840 YRF1-6YNL339C 5580 nt8.72□□□□□ -1.01
TOF1P53840 YRF1-7YPL283C 5580 nt8.72□□□□□ -1.01
TOF1P53840 YJL009WYJL009W 327 nt8.71□□□□□ -1.02
TOF1P53840 YLR072WYLR072W 2082 nt8.7□□□□□ -1.02
TOF1P53840 PAU21YOR394W 495 nt8.7□□□□□ -1.02
TOF1P53840 PAU22YPL282C 495 nt8.7□□□□□ -1.02
TOF1P53840 GRH1YDR517W 1119 nt8.69□□□□□ -1.02
TOF1P53840 UTR5YEL035C 501 nt8.69□□□□□ -1.02
TOF1P53840 SRM1YGL097W 1449 nt8.69□□□□□ -1.02
TOF1P53840 YIL177CYIL177C 5277 nt8.69□□□□□ -1.02
TOF1P53840 HBS1YKR084C 1836 nt8.68□□□□□ -1.02
TOF1P53840 BXI1YNL305C 894 nt8.68□□□□□ -1.02
TOF1P53840 BUD20YLR074C 501 nt8.67□□□□□ -1.02
TOF1P53840 RPS6AYPL090C 711 nt8.67□□□□□ -1.02
TOF1P53840 RPS6BYBR181C 711 nt8.67□□□□□ -1.02
TOF1P53840 ADA2YDR448W 1305 nt8.66□□□□□ -1.02
TOF1P53840 TOK1YJL093C 2076 nt8.66□□□□□ -1.02
TOF1P53840 MEP1YGR121C 1479 nt8.65□□□□□ -1.02
TOF1P53840 ORT1YOR130C 879 nt8.65□□□□□ -1.02
TOF1P53840 RHO1YPR165W 630 nt8.65□□□□□ -1.02
TOF1P53840 MFT1YML062C 1179 nt8.64□□□□□ -1.03
TOF1P53840 YOR343CYOR343C 327 nt8.64□□□□□ -1.03
TOF1P53840 MRP1YDR347W 966 nt8.63□□□□□ -1.03
TOF1P53840 LEA1YPL213W 717 nt8.63□□□□□ -1.03
TOF1P53840 SHC1YER096W 1539 nt8.63□□□□□ -1.03
TOF1P53840 MEX67YPL169C 1800 nt8.63□□□□□ -1.03
TOF1P53840 HRA1HRA1 564 nt8.62□□□□□ -1.03
TOF1P53840 ATP2YJR121W 1536 nt8.62□□□□□ -1.03
TOF1P53840 PUP3YER094C 618 nt8.61□□□□□ -1.03
TOF1P53840 GDH1YOR375C 1365 nt8.61□□□□□ -1.03
TOF1P53840 YPT31YER031C 672 nt8.6□□□□□ -1.03
TOF1P53840 HIS3YOR202W 663 nt8.6□□□□□ -1.03
TOF1P53840 YPR084WYPR084W 1371 nt8.6□□□□□ -1.03
TOF1P53840 FTH1YBR207W 1398 nt8.6□□□□□ -1.03
TOF1P53840 DUR3YHL016C 2208 nt8.6□□□□□ -1.03
TOF1P53840 LRO1YNR008W 1986 nt8.59□□□□□ -1.03
TOF1P53840 ABP1YCR088W 1779 nt8.59□□□□□ -1.03
TOF1P53840 THI73YLR004C 1572 nt8.59□□□□□ -1.03
TOF1P53840 EHT1YBR177C 1356 nt8.59□□□□□ -1.03
TOF1P53840 MDL2YPL270W 2322 nt8.58□□□□□ -1.04
TOF1P53840 ELP4YPL101W 1371 nt8.58□□□□□ -1.04
TOF1P53840 YDR306CYDR306C 1437 nt8.57□□□□□ -1.04
TOF1P53840 TAD2YJL035C 753 nt8.57□□□□□ -1.04
TOF1P53840 YMR206WYMR206W 942 nt8.56□□□□□ -1.04
TOF1P53840 snR4snR4 186 nt8.56□□□□□ -1.04
TOF1P53840 HXT8YJL214W 1710 nt8.54□□□□□ -1.04
TOF1P53840 tL(UAA)B1tL(UAA)B1 84 nt8.54□□□□□ -1.04
TOF1P53840 tL(UAA)B2tL(UAA)B2 84 nt8.54□□□□□ -1.04
TOF1P53840 tL(UAA)DtL(UAA)D 84 nt8.54□□□□□ -1.04
TOF1P53840 SUP51tL(UAA)J 84 nt8.54□□□□□ -1.04
TOF1P53840 tL(UAA)KtL(UAA)K 84 nt8.54□□□□□ -1.04
TOF1P53840 tL(UAA)LtL(UAA)L 84 nt8.54□□□□□ -1.04
TOF1P53840 tL(UAA)NtL(UAA)N 84 nt8.54□□□□□ -1.04
TOF1P53840 TIM50YPL063W 1431 nt8.54□□□□□ -1.04
TOF1P53840 JHD1YER051W 1479 nt8.52□□□□□ -1.05
TOF1P53840 BUD31YCR063W 474 nt8.52□□□□□ -1.05
TOF1P53840 TDH1YJL052W 999 nt8.52□□□□□ -1.05
TOF1P53840 YAL016C-AYAL016C-A 315 nt8.52□□□□□ -1.05
TOF1P53840 DIP5YPL265W 1827 nt8.52□□□□□ -1.05
TOF1P53840 RPL12BYDR418W 498 nt8.51□□□□□ -1.05
TOF1P53840 NDE2YDL085W 1638 nt8.51□□□□□ -1.05
TOF1P53840 INO1YJL153C 1602 nt8.51□□□□□ -1.05
TOF1P53840 YHL030W-AYHL030W-A 462 nt8.5□□□□□ -1.05
TOF1P53840 YIL168WYIL168W 384 nt8.5□□□□□ -1.05
TOF1P53840 ADE1YAR015W 921 nt8.5□□□□□ -1.05
TOF1P53840 RCF1YML030W 480 nt8.5□□□□□ -1.05
TOF1P53840 PRE10YOR362C 867 nt8.49□□□□□ -1.05
TOF1P53840 DIA4YHR011W 1341 nt8.49□□□□□ -1.05
TOF1P53840 PMU1YKL128C 888 nt8.48□□□□□ -1.05
TOF1P53840 TIF3YPR163C 1311 nt8.48□□□□□ -1.05
TOF1P53840 GLY1YEL046C 1164 nt8.47□□□□□ -1.05
TOF1P53840 YNL140CYNL140C 570 nt8.47□□□□□ -1.05
TOF1P53840 FRA1YLL029W 2250 nt8.47□□□□□ -1.05
TOF1P53840 TGL5YOR081C 2250 nt8.46□□□□□ -1.06
TOF1P53840 PUS7YOR243C 2031 nt8.46□□□□□ -1.06
TOF1P53840 NUP53YMR153W 1428 nt8.46□□□□□ -1.06
TOF1P53840 TDA4YJR116W 840 nt8.45□□□□□ -1.06
TOF1P53840 INM1YHR046C 888 nt8.44□□□□□ -1.06
TOF1P53840 TOS1YBR162C 1368 nt8.44□□□□□ -1.06
Retrieved 100 of 7,029 protein–RNA pairs in 38 ms