Protein–RNA interactions for Protein: P53622

COP1, Coatomer subunit alpha, yeastyeast

Known RBP Predictions only

Length 1,201 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
COP1P53622 INH1YDL181W 258 nt8.32□□□□□ -1.08
COP1P53622 RRT14YIL127C 621 nt8.32□□□□□ -1.08
COP1P53622 BUD20YLR074C 501 nt8.32□□□□□ -1.08
COP1P53622 OLA1YBR025C 1185 nt8.32□□□□□ -1.08
COP1P53622 AGP3YFL055W 1677 nt8.32□□□□□ -1.08
COP1P53622 YDR467CYDR467C 327 nt8.31□□□□□ -1.08
COP1P53622 YIR035CYIR035C 765 nt8.31□□□□□ -1.08
COP1P53622 YJL160CYJL160C 864 nt8.31□□□□□ -1.08
COP1P53622 GPM1YKL152C 744 nt8.31□□□□□ -1.08
COP1P53622 YMR316C-BYMR316C-B 309 nt8.31□□□□□ -1.08
COP1P53622 HBS1YKR084C 1836 nt8.31□□□□□ -1.08
COP1P53622 DUS3YLR401C 2007 nt8.29□□□□□ -1.08
COP1P53622 YLR173WYLR173W 1827 nt8.29□□□□□ -1.08
COP1P53622 RSC4YKR008W 1878 nt8.28□□□□□ -1.08
COP1P53622 HRA1HRA1 564 nt8.28□□□□□ -1.08
COP1P53622 EMC3YKL207W 762 nt8.28□□□□□ -1.08
COP1P53622 THI3YDL080C 1830 nt8.28□□□□□ -1.08
COP1P53622 MCM5YLR274W 2328 nt8.28□□□□□ -1.08
COP1P53622 LAS17YOR181W 1902 nt8.27□□□□□ -1.09
COP1P53622 YMR210WYMR210W 1350 nt8.27□□□□□ -1.09
COP1P53622 GRH1YDR517W 1119 nt8.27□□□□□ -1.09
COP1P53622 CAK1YFL029C 1107 nt8.27□□□□□ -1.09
COP1P53622 YOR343CYOR343C 327 nt8.27□□□□□ -1.09
COP1P53622 DUR3YHL016C 2208 nt8.27□□□□□ -1.09
COP1P53622 OCH1YGL038C 1443 nt8.27□□□□□ -1.09
COP1P53622 MFT1YML062C 1179 nt8.26□□□□□ -1.09
COP1P53622 YBL095WYBL095W 813 nt8.26□□□□□ -1.09
COP1P53622 PAU21YOR394W 495 nt8.26□□□□□ -1.09
COP1P53622 PAU22YPL282C 495 nt8.26□□□□□ -1.09
COP1P53622 GCD11YER025W 1584 nt8.26□□□□□ -1.09
COP1P53622 LEU4YNL104C 1860 nt8.26□□□□□ -1.09
COP1P53622 MET22YOL064C 1074 nt8.25□□□□□ -1.09
COP1P53622 YPR084WYPR084W 1371 nt8.24□□□□□ -1.09
COP1P53622 TMS1YDR105C 1422 nt8.24□□□□□ -1.09
COP1P53622 MRP1YDR347W 966 nt8.24□□□□□ -1.09
COP1P53622 YMC2YBR104W 990 nt8.24□□□□□ -1.09
COP1P53622 AAC3YBR085W 924 nt8.23□□□□□ -1.09
COP1P53622 MRS4YKR052C 915 nt8.22□□□□□ -1.09
COP1P53622 PDC6YGR087C 1692 nt8.21□□□□□ -1.09
COP1P53622 ECM10YEL030W 1935 nt8.21□□□□□ -1.09
COP1P53622 tE(CUC)DtE(CUC)D 72 nt8.21□□□□□ -1.1
COP1P53622 tE(CUC)ItE(CUC)I 72 nt8.21□□□□□ -1.1
COP1P53622 RPL12BYDR418W 498 nt8.21□□□□□ -1.1
COP1P53622 BUB2YMR055C 921 nt8.21□□□□□ -1.1
COP1P53622 YPT31YER031C 672 nt8.2□□□□□ -1.1
COP1P53622 YER156CYER156C 1017 nt8.2□□□□□ -1.1
COP1P53622 YAL016C-AYAL016C-A 315 nt8.2□□□□□ -1.1
COP1P53622 YMR206WYMR206W 942 nt8.2□□□□□ -1.1
COP1P53622 GDH1YOR375C 1365 nt8.19□□□□□ -1.1
COP1P53622 YJL009WYJL009W 327 nt8.18□□□□□ -1.1
COP1P53622 YJR149WYJR149W 1215 nt8.18□□□□□ -1.1
COP1P53622 FRT1YOR324C 1809 nt8.17□□□□□ -1.1
COP1P53622 PET18YCR020C 648 nt8.17□□□□□ -1.1
COP1P53622 ADE5,7YGL234W 2409 nt8.16□□□□□ -1.1
COP1P53622 ADE16YLR028C 1776 nt8.15□□□□□ -1.1
COP1P53622 ADA2YDR448W 1305 nt8.15□□□□□ -1.1
COP1P53622 TAD2YJL035C 753 nt8.15□□□□□ -1.1
COP1P53622 FET5YFL041W 1869 nt8.15□□□□□ -1.11
COP1P53622 GGC1YDL198C 903 nt8.14□□□□□ -1.11
COP1P53622 RNA170RNA170 169 nt8.14□□□□□ -1.11
COP1P53622 NDE1YMR145C 1683 nt8.14□□□□□ -1.11
COP1P53622 snR4snR4 186 nt8.13□□□□□ -1.11
COP1P53622 BXI1YNL305C 894 nt8.12□□□□□ -1.11
COP1P53622 ORT1YOR130C 879 nt8.12□□□□□ -1.11
COP1P53622 RPS6AYPL090C 711 nt8.12□□□□□ -1.11
COP1P53622 RHO1YPR165W 630 nt8.12□□□□□ -1.11
COP1P53622 RPS6BYBR181C 711 nt8.12□□□□□ -1.11
COP1P53622 PMA2YPL036W 2844 nt8.11□□□□□ -1.11
COP1P53622 AIM34YMR003W 597 nt8.11□□□□□ -1.11
COP1P53622 NPP2YEL016C 1482 nt8.11□□□□□ -1.11
COP1P53622 BEM1YBR200W 1656 nt8.11□□□□□ -1.11
COP1P53622 TDH1YJL052W 999 nt8.1□□□□□ -1.11
COP1P53622 PMU1YKL128C 888 nt8.1□□□□□ -1.11
COP1P53622 ATP2YJR121W 1536 nt8.09□□□□□ -1.11
COP1P53622 YBR056WYBR056W 1506 nt8.09□□□□□ -1.11
COP1P53622 PFS2YNL317W 1398 nt8.09□□□□□ -1.12
COP1P53622 UTR5YEL035C 501 nt8.08□□□□□ -1.12
COP1P53622 PUP3YER094C 618 nt8.08□□□□□ -1.12
COP1P53622 CTF3YLR381W 2202 nt8.08□□□□□ -1.12
COP1P53622 AAT1YKL106W 1356 nt8.08□□□□□ -1.12
COP1P53622 THI73YLR004C 1572 nt8.07□□□□□ -1.12
COP1P53622 YGR139WYGR139W 339 nt8.07□□□□□ -1.12
COP1P53622 ELP4YPL101W 1371 nt8.07□□□□□ -1.12
COP1P53622 YDR306CYDR306C 1437 nt8.06□□□□□ -1.12
COP1P53622 HSV2YGR223C 1347 nt8.05□□□□□ -1.12
COP1P53622 PRE10YOR362C 867 nt8.05□□□□□ -1.12
COP1P53622 tL(UAA)B1tL(UAA)B1 84 nt8.04□□□□□ -1.12
COP1P53622 tL(UAA)B2tL(UAA)B2 84 nt8.04□□□□□ -1.12
COP1P53622 tL(UAA)DtL(UAA)D 84 nt8.04□□□□□ -1.12
COP1P53622 SUP51tL(UAA)J 84 nt8.04□□□□□ -1.12
COP1P53622 tL(UAA)KtL(UAA)K 84 nt8.04□□□□□ -1.12
COP1P53622 tL(UAA)LtL(UAA)L 84 nt8.04□□□□□ -1.12
COP1P53622 tL(UAA)NtL(UAA)N 84 nt8.04□□□□□ -1.12
COP1P53622 YOR268CYOR268C 399 nt8.04□□□□□ -1.12
COP1P53622 CHA1YCL064C 1083 nt8.03□□□□□ -1.12
COP1P53622 snR86snR86 1004 nt8.03□□□□□ -1.12
COP1P53622 EDC2YER035W 438 nt8.02□□□□□ -1.13
COP1P53622 YGR137WYGR137W 375 nt8.02□□□□□ -1.13
COP1P53622 ADE2YOR128C 1716 nt8.02□□□□□ -1.13
COP1P53622 MAM3YOL060C 2121 nt8.02□□□□□ -1.13
Retrieved 100 of 7,029 protein–RNA pairs in 43 ms