Protein–RNA interactions for Protein: P51676

Ccr1l1, C-C chemokine receptor 1-like protein 1, mousemouse

Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccr1l1P51676 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC21.35■■□□□ 1.01
Ccr1l1P51676 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Ccr1l1P51676 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Ccr1l1P51676 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC21.33■■□□□ 1.01
Ccr1l1P51676 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC21.33■■□□□ 1.01
Ccr1l1P51676 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Ccr1l1P51676 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC21.32■■□□□ 1
Ccr1l1P51676 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Ccr1l1P51676 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC21.31■■□□□ 1
Ccr1l1P51676 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC21.31■■□□□ 1
Ccr1l1P51676 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Ccr1l1P51676 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Ccr1l1P51676 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC21.3■■□□□ 1
Ccr1l1P51676 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC21.29■■□□□ 1
Ccr1l1P51676 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC21.29■■□□□ 1
Ccr1l1P51676 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Ccr1l1P51676 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC21.28■■□□□ 1
Ccr1l1P51676 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Ccr1l1P51676 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Ccr1l1P51676 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
Ccr1l1P51676 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Ccr1l1P51676 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Ccr1l1P51676 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Ccr1l1P51676 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
Ccr1l1P51676 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Ccr1l1P51676 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Ccr1l1P51676 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Ccr1l1P51676 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Ccr1l1P51676 Particl-201ENSMUST00000205370 1560 ntBASIC21.23■□□□□ 0.99
Ccr1l1P51676 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC21.22■□□□□ 0.99
Ccr1l1P51676 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC21.22■□□□□ 0.99
Ccr1l1P51676 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Ccr1l1P51676 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Ccr1l1P51676 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Ccr1l1P51676 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Ccr1l1P51676 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Ccr1l1P51676 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC21.2■□□□□ 0.98
Ccr1l1P51676 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Ccr1l1P51676 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC21.19■□□□□ 0.98
Ccr1l1P51676 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
Ccr1l1P51676 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
Ccr1l1P51676 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Ccr1l1P51676 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC21.18■□□□□ 0.98
Ccr1l1P51676 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Ccr1l1P51676 Gm7432-201ENSMUST00000210343 879 ntBASIC21.17■□□□□ 0.98
Ccr1l1P51676 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Ccr1l1P51676 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Ccr1l1P51676 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Ccr1l1P51676 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC21.16■□□□□ 0.98
Ccr1l1P51676 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC21.15■□□□□ 0.98
Ccr1l1P51676 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Ccr1l1P51676 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Ccr1l1P51676 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Ccr1l1P51676 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Ccr1l1P51676 AC131739.1-201ENSMUST00000221692 1245 ntBASIC21.14■□□□□ 0.97
Ccr1l1P51676 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC21.14■□□□□ 0.97
Ccr1l1P51676 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Ccr1l1P51676 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Ccr1l1P51676 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
Ccr1l1P51676 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Ccr1l1P51676 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC21.13■□□□□ 0.97
Ccr1l1P51676 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC21.13■□□□□ 0.97
Ccr1l1P51676 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC21.13■□□□□ 0.97
Ccr1l1P51676 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Ccr1l1P51676 Gm37847-201ENSMUST00000192163 1497 ntBASIC21.12■□□□□ 0.97
Ccr1l1P51676 Gm31748-201ENSMUST00000194938 1497 ntBASIC21.12■□□□□ 0.97
Ccr1l1P51676 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Ccr1l1P51676 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Ccr1l1P51676 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
Ccr1l1P51676 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
Ccr1l1P51676 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Ccr1l1P51676 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Ccr1l1P51676 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC21.09■□□□□ 0.97
Ccr1l1P51676 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Ccr1l1P51676 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Ccr1l1P51676 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Ccr1l1P51676 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Ccr1l1P51676 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC21.09■□□□□ 0.97
Ccr1l1P51676 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Ccr1l1P51676 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Ccr1l1P51676 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Ccr1l1P51676 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Ccr1l1P51676 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Ccr1l1P51676 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Ccr1l1P51676 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Ccr1l1P51676 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Ccr1l1P51676 Gm11599-201ENSMUST00000118720 878 ntBASIC21.06■□□□□ 0.96
Ccr1l1P51676 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC21.06■□□□□ 0.96
Ccr1l1P51676 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Ccr1l1P51676 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Ccr1l1P51676 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Ccr1l1P51676 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
Ccr1l1P51676 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Ccr1l1P51676 Gm37136-201ENSMUST00000194368 194 ntBASIC21.04■□□□□ 0.96
Ccr1l1P51676 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Ccr1l1P51676 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC21.04■□□□□ 0.96
Ccr1l1P51676 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
Ccr1l1P51676 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Ccr1l1P51676 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Ccr1l1P51676 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Retrieved 100 of 76,532 protein–RNA pairs in 36.1 ms