Protein–RNA interactions for Protein: P48540

Gdnf, Glial cell line-derived neurotrophic factor, mousemouse

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GdnfP48540 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC20.4■□□□□ 0.86
GdnfP48540 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
GdnfP48540 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
GdnfP48540 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC20.39■□□□□ 0.85
GdnfP48540 Gm24970-201ENSMUST00000175582 82 ntBASIC20.39■□□□□ 0.85
GdnfP48540 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
GdnfP48540 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC20.38■□□□□ 0.85
GdnfP48540 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
GdnfP48540 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
GdnfP48540 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
GdnfP48540 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
GdnfP48540 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
GdnfP48540 AC122428.3-201ENSMUST00000215551 2290 ntBASIC20.37■□□□□ 0.85
GdnfP48540 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC20.37■□□□□ 0.85
GdnfP48540 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
GdnfP48540 Il17rd-202ENSMUST00000223942 2186 ntBASIC20.36■□□□□ 0.85
GdnfP48540 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
GdnfP48540 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
GdnfP48540 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC20.36■□□□□ 0.85
GdnfP48540 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC20.36■□□□□ 0.85
GdnfP48540 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
GdnfP48540 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
GdnfP48540 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC20.35■□□□□ 0.85
GdnfP48540 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
GdnfP48540 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC20.35■□□□□ 0.85
GdnfP48540 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC20.35■□□□□ 0.85
GdnfP48540 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
GdnfP48540 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC20.34■□□□□ 0.85
GdnfP48540 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC20.34■□□□□ 0.85
GdnfP48540 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
GdnfP48540 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
GdnfP48540 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC20.33■□□□□ 0.85
GdnfP48540 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
GdnfP48540 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC20.33■□□□□ 0.85
GdnfP48540 AC157572.2-201ENSMUST00000226970 908 ntBASIC20.33■□□□□ 0.85
GdnfP48540 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
GdnfP48540 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.84
GdnfP48540 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
GdnfP48540 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
GdnfP48540 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.84
GdnfP48540 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
GdnfP48540 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
GdnfP48540 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
GdnfP48540 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
GdnfP48540 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
GdnfP48540 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
GdnfP48540 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
GdnfP48540 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
GdnfP48540 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
GdnfP48540 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
GdnfP48540 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
GdnfP48540 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
GdnfP48540 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
GdnfP48540 Pcf11-205ENSMUST00000208255 1720 ntBASIC20.29■□□□□ 0.84
GdnfP48540 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
GdnfP48540 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
GdnfP48540 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
GdnfP48540 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
GdnfP48540 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
GdnfP48540 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
GdnfP48540 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
GdnfP48540 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
GdnfP48540 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
GdnfP48540 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC20.26■□□□□ 0.83
GdnfP48540 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
GdnfP48540 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
GdnfP48540 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
GdnfP48540 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
GdnfP48540 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
GdnfP48540 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
GdnfP48540 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
GdnfP48540 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC20.25■□□□□ 0.83
GdnfP48540 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
GdnfP48540 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
GdnfP48540 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
GdnfP48540 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
GdnfP48540 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
GdnfP48540 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
GdnfP48540 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
GdnfP48540 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC20.22■□□□□ 0.83
GdnfP48540 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
GdnfP48540 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
GdnfP48540 Gm17641-201ENSMUST00000166328 2350 ntBASIC20.21■□□□□ 0.83
GdnfP48540 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC20.21■□□□□ 0.83
GdnfP48540 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
GdnfP48540 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
GdnfP48540 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
GdnfP48540 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
GdnfP48540 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC20.2■□□□□ 0.82
GdnfP48540 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
GdnfP48540 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC20.2■□□□□ 0.82
GdnfP48540 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
GdnfP48540 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC20.19■□□□□ 0.82
GdnfP48540 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
GdnfP48540 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
GdnfP48540 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
GdnfP48540 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
GdnfP48540 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC20.18■□□□□ 0.82
GdnfP48540 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
GdnfP48540 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 34.2 ms