Protein–RNA interactions for Protein: P48030

Tgfa, Protransforming growth factor alpha, mousemouse

Predictions only

Length 159 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TgfaP48030 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
TgfaP48030 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
TgfaP48030 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC20.83■□□□□ 0.93
TgfaP48030 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
TgfaP48030 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC20.83■□□□□ 0.92
TgfaP48030 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
TgfaP48030 Gm7332-201ENSMUST00000118351 454 ntBASIC20.82■□□□□ 0.92
TgfaP48030 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
TgfaP48030 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC20.79■□□□□ 0.92
TgfaP48030 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC20.79■□□□□ 0.92
TgfaP48030 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC20.79■□□□□ 0.92
TgfaP48030 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC20.79■□□□□ 0.92
TgfaP48030 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
TgfaP48030 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
TgfaP48030 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
TgfaP48030 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC20.78■□□□□ 0.92
TgfaP48030 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
TgfaP48030 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
TgfaP48030 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
TgfaP48030 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC20.76■□□□□ 0.91
TgfaP48030 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
TgfaP48030 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
TgfaP48030 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
TgfaP48030 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
TgfaP48030 Gm27502-201ENSMUST00000183495 199 ntBASIC20.75■□□□□ 0.91
TgfaP48030 Gm45364-201ENSMUST00000210883 159 ntBASIC20.75■□□□□ 0.91
TgfaP48030 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
TgfaP48030 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
TgfaP48030 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC20.74■□□□□ 0.91
TgfaP48030 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
TgfaP48030 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
TgfaP48030 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
TgfaP48030 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC20.72■□□□□ 0.91
TgfaP48030 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
TgfaP48030 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
TgfaP48030 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
TgfaP48030 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC20.71■□□□□ 0.91
TgfaP48030 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC20.71■□□□□ 0.91
TgfaP48030 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
TgfaP48030 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
TgfaP48030 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
TgfaP48030 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
TgfaP48030 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
TgfaP48030 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC20.68■□□□□ 0.9
TgfaP48030 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC20.68■□□□□ 0.9
TgfaP48030 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
TgfaP48030 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC20.67■□□□□ 0.9
TgfaP48030 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
TgfaP48030 Gm37136-201ENSMUST00000194368 194 ntBASIC20.66■□□□□ 0.9
TgfaP48030 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
TgfaP48030 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
TgfaP48030 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC20.66■□□□□ 0.9
TgfaP48030 Gm13889-201ENSMUST00000099689 1386 ntBASIC20.65■□□□□ 0.9
TgfaP48030 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
TgfaP48030 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC20.64■□□□□ 0.89
TgfaP48030 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC20.63■□□□□ 0.89
TgfaP48030 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC20.63■□□□□ 0.89
TgfaP48030 Gm12818-201ENSMUST00000117562 1349 ntBASIC20.63■□□□□ 0.89
TgfaP48030 Gm9905-201ENSMUST00000065740 1845 ntBASIC20.63■□□□□ 0.89
TgfaP48030 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
TgfaP48030 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
TgfaP48030 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
TgfaP48030 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
TgfaP48030 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC20.62■□□□□ 0.89
TgfaP48030 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
TgfaP48030 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
TgfaP48030 Gm14523-201ENSMUST00000117260 558 ntBASIC20.6■□□□□ 0.89
TgfaP48030 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
TgfaP48030 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
TgfaP48030 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
TgfaP48030 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
TgfaP48030 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.89
TgfaP48030 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
TgfaP48030 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
TgfaP48030 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
TgfaP48030 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
TgfaP48030 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
TgfaP48030 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC20.57■□□□□ 0.88
TgfaP48030 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
TgfaP48030 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC20.57■□□□□ 0.88
TgfaP48030 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
TgfaP48030 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
TgfaP48030 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
TgfaP48030 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
TgfaP48030 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
TgfaP48030 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC20.55■□□□□ 0.88
TgfaP48030 Gm5067-201ENSMUST00000170449 1009 ntBASIC20.55■□□□□ 0.88
TgfaP48030 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
TgfaP48030 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
TgfaP48030 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
TgfaP48030 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
TgfaP48030 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
TgfaP48030 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
TgfaP48030 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
TgfaP48030 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC20.54■□□□□ 0.88
TgfaP48030 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC20.54■□□□□ 0.88
TgfaP48030 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
TgfaP48030 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
TgfaP48030 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
TgfaP48030 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 53.4 ms