Protein–RNA interactions for Protein: P40645

Sox6, Transcription factor SOX-6, mousemouse

Predictions only

Length 827 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox6P40645 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Sox6P40645 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC21.88■■□□□ 1.09
Sox6P40645 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC21.88■■□□□ 1.09
Sox6P40645 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Sox6P40645 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC21.87■■□□□ 1.09
Sox6P40645 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Sox6P40645 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
Sox6P40645 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Sox6P40645 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC21.85■■□□□ 1.09
Sox6P40645 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Sox6P40645 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC21.84■■□□□ 1.09
Sox6P40645 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Sox6P40645 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC21.84■■□□□ 1.09
Sox6P40645 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Sox6P40645 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC21.82■■□□□ 1.08
Sox6P40645 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Sox6P40645 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Sox6P40645 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Sox6P40645 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Sox6P40645 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Sox6P40645 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Sox6P40645 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Sox6P40645 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
Sox6P40645 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Sox6P40645 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC21.78■■□□□ 1.08
Sox6P40645 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC21.78■■□□□ 1.08
Sox6P40645 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Sox6P40645 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Sox6P40645 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Sox6P40645 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Sox6P40645 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC21.77■■□□□ 1.08
Sox6P40645 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC21.76■■□□□ 1.07
Sox6P40645 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Sox6P40645 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Sox6P40645 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC21.76■■□□□ 1.07
Sox6P40645 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC21.76■■□□□ 1.07
Sox6P40645 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Sox6P40645 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC21.75■■□□□ 1.07
Sox6P40645 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
Sox6P40645 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC21.75■■□□□ 1.07
Sox6P40645 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Sox6P40645 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Sox6P40645 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Sox6P40645 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC21.74■■□□□ 1.07
Sox6P40645 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Sox6P40645 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Sox6P40645 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Sox6P40645 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Sox6P40645 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Sox6P40645 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
Sox6P40645 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC21.73■■□□□ 1.07
Sox6P40645 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC21.72■■□□□ 1.07
Sox6P40645 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
Sox6P40645 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Sox6P40645 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC21.72■■□□□ 1.07
Sox6P40645 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Sox6P40645 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Sox6P40645 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Sox6P40645 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Sox6P40645 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
Sox6P40645 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Sox6P40645 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Sox6P40645 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Sox6P40645 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC21.69■■□□□ 1.06
Sox6P40645 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
Sox6P40645 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Sox6P40645 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Sox6P40645 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
Sox6P40645 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC21.68■■□□□ 1.06
Sox6P40645 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC21.68■■□□□ 1.06
Sox6P40645 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Sox6P40645 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Sox6P40645 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Sox6P40645 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
Sox6P40645 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC21.67■■□□□ 1.06
Sox6P40645 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC21.66■■□□□ 1.06
Sox6P40645 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Sox6P40645 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
Sox6P40645 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC21.66■■□□□ 1.06
Sox6P40645 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC21.66■■□□□ 1.06
Sox6P40645 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC21.65■■□□□ 1.06
Sox6P40645 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Sox6P40645 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Sox6P40645 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Sox6P40645 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Sox6P40645 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC21.65■■□□□ 1.06
Sox6P40645 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
Sox6P40645 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.05
Sox6P40645 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
Sox6P40645 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC21.64■■□□□ 1.05
Sox6P40645 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC21.64■■□□□ 1.05
Sox6P40645 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Sox6P40645 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC21.63■■□□□ 1.05
Sox6P40645 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Sox6P40645 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC21.62■■□□□ 1.05
Sox6P40645 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC21.62■■□□□ 1.05
Sox6P40645 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Sox6P40645 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Sox6P40645 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Sox6P40645 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC21.61■■□□□ 1.05
Retrieved 100 of 76,532 protein–RNA pairs in 108.8 ms