Protein–RNA interactions for Protein: P39059

COL15A1, Collagen alpha-1(XV) chain, humanhuman

Predictions only

Length 1,388 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL15A1P39059 ATRNL1-207ENST00000527407 1583 ntTSL 5 BASIC33.1■■■□□ 2.89
COL15A1P39059 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC33.09■■■□□ 2.89
COL15A1P39059 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC33.08■■■□□ 2.89
COL15A1P39059 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC33.08■■■□□ 2.89
COL15A1P39059 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC33.08■■■□□ 2.89
COL15A1P39059 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC33.07■■■□□ 2.88
COL15A1P39059 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC33.07■■■□□ 2.88
COL15A1P39059 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC33.07■■■□□ 2.88
COL15A1P39059 TAZ-215ENST00000612460 1793 ntAPPRIS P1 TSL 1 (best) BASIC33.05■■■□□ 2.88
COL15A1P39059 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC33.05■■■□□ 2.88
COL15A1P39059 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC33.04■■■□□ 2.88
COL15A1P39059 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC33.04■■■□□ 2.88
COL15A1P39059 AC127502.1-201ENST00000399971 1502 ntBASIC33.03■■■□□ 2.88
COL15A1P39059 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC33.03■■■□□ 2.88
COL15A1P39059 WHAMMP2-203ENST00000563942 1603 ntBASIC33.03■■■□□ 2.88
COL15A1P39059 CARS2-201ENST00000257347 1879 ntAPPRIS P1 TSL 1 (best) BASIC33.03■■■□□ 2.88
COL15A1P39059 POU3F1-201ENST00000373012 2184 ntAPPRIS P1 BASIC33.03■■■□□ 2.88
COL15A1P39059 AC135983.2-203ENST00000454486 1613 ntBASIC33.02■■■□□ 2.88
COL15A1P39059 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC33.01■■■□□ 2.88
COL15A1P39059 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC33.01■■■□□ 2.88
COL15A1P39059 AC008813.1-201ENST00000536597 885 ntBASIC33.01■■■□□ 2.88
COL15A1P39059 AC022413.1-201ENST00000624602 984 ntBASIC33.01■■■□□ 2.88
COL15A1P39059 HOXD8-201ENST00000313173 1917 ntAPPRIS P3 TSL 2 BASIC33.01■■■□□ 2.87
COL15A1P39059 CAPNS1-201ENST00000246533 1918 ntAPPRIS P2 TSL 1 (best) BASIC33■■■□□ 2.87
COL15A1P39059 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC32.99■■■□□ 2.87
COL15A1P39059 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC32.99■■■□□ 2.87
COL15A1P39059 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC32.99■■■□□ 2.87
COL15A1P39059 RAB26-201ENST00000210187 1675 ntAPPRIS P1 TSL 1 (best) BASIC32.98■■■□□ 2.87
COL15A1P39059 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC32.98■■■□□ 2.87
COL15A1P39059 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC32.98■■■□□ 2.87
COL15A1P39059 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC32.97■■■□□ 2.87
COL15A1P39059 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC32.97■■■□□ 2.87
COL15A1P39059 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC32.97■■■□□ 2.87
COL15A1P39059 DPF1-204ENST00000416611 2341 ntTSL 5 BASIC32.97■■■□□ 2.87
COL15A1P39059 PGM5-201ENST00000396392 1782 ntTSL 1 (best) BASIC32.97■■■□□ 2.87
COL15A1P39059 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC32.97■■■□□ 2.87
COL15A1P39059 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC32.96■■■□□ 2.87
COL15A1P39059 NTF6A-201ENST00000591175 560 ntBASIC32.95■■■□□ 2.86
COL15A1P39059 ANGPTL6-201ENST00000253109 1900 ntAPPRIS P1 TSL 1 (best) BASIC32.94■■■□□ 2.86
COL15A1P39059 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC32.94■■■□□ 2.86
COL15A1P39059 AGAP3-211ENST00000473312 2039 ntTSL 1 (best) BASIC32.93■■■□□ 2.86
COL15A1P39059 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC32.93■■■□□ 2.86
COL15A1P39059 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC32.93■■■□□ 2.86
COL15A1P39059 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC32.91■■■□□ 2.86
COL15A1P39059 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC32.91■■■□□ 2.86
COL15A1P39059 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC32.91■■■□□ 2.86
COL15A1P39059 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC32.91■■■□□ 2.86
COL15A1P39059 CHPT1-205ENST00000549872 2001 ntAPPRIS ALT2 TSL 5 BASIC32.91■■■□□ 2.86
COL15A1P39059 AL135925.1-201ENST00000605920 1701 ntBASIC32.9■■■□□ 2.86
COL15A1P39059 MAFA-201ENST00000333480 2347 ntAPPRIS P1 BASIC32.9■■■□□ 2.86
COL15A1P39059 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC32.9■■■□□ 2.86
COL15A1P39059 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC32.9■■■□□ 2.86
COL15A1P39059 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC32.9■■■□□ 2.86
COL15A1P39059 SHC2-201ENST00000264554 2494 ntAPPRIS P1 TSL 1 (best) BASIC32.9■■■□□ 2.86
COL15A1P39059 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC32.89■■■□□ 2.86
COL15A1P39059 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC32.89■■■□□ 2.86
COL15A1P39059 ST7-208ENST00000393451 2110 ntAPPRIS P1 TSL 1 (best) BASIC32.89■■■□□ 2.86
COL15A1P39059 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC32.88■■■□□ 2.85
COL15A1P39059 CERS2-201ENST00000271688 2544 ntAPPRIS P1 TSL 5 BASIC32.88■■■□□ 2.85
COL15A1P39059 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC32.88■■■□□ 2.85
COL15A1P39059 TRIOBP-205ENST00000407319 2125 ntAPPRIS P3 TSL 1 (best) BASIC32.88■■■□□ 2.85
COL15A1P39059 CHST11-203ENST00000547956 936 ntTSL 2 BASIC32.88■■■□□ 2.85
COL15A1P39059 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC32.88■■■□□ 2.85
COL15A1P39059 HES4-202ENST00000428771 1040 ntTSL 2 BASIC32.87■■■□□ 2.85
COL15A1P39059 MBOAT7-202ENST00000338624 2076 ntTSL 2 BASIC32.87■■■□□ 2.85
COL15A1P39059 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC32.86■■■□□ 2.85
COL15A1P39059 RAMP2-AS1-202ENST00000589716 1985 ntTSL 5 BASIC32.86■■■□□ 2.85
COL15A1P39059 HAUS7-201ENST00000370210 1593 ntAPPRIS ALT2 TSL 2 BASIC32.86■■■□□ 2.85
COL15A1P39059 AC012354.3-201ENST00000623734 483 ntBASIC32.85■■■□□ 2.85
COL15A1P39059 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC32.84■■■□□ 2.85
COL15A1P39059 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC32.84■■■□□ 2.85
COL15A1P39059 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC32.84■■■□□ 2.85
COL15A1P39059 SH3GL3-202ENST00000427482 1806 ntAPPRIS P1 TSL 1 (best) BASIC32.84■■■□□ 2.85
COL15A1P39059 LFNG-201ENST00000222725 2377 ntAPPRIS P4 TSL 5 BASIC32.83■■■□□ 2.85
COL15A1P39059 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC32.83■■■□□ 2.85
COL15A1P39059 AC110285.7-201ENST00000624417 1536 ntBASIC32.82■■■□□ 2.84
COL15A1P39059 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC32.82■■■□□ 2.84
COL15A1P39059 AC148477.6-201ENST00000623746 465 ntBASIC32.82■■■□□ 2.84
COL15A1P39059 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC32.8■■■□□ 2.84
COL15A1P39059 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC32.8■■■□□ 2.84
COL15A1P39059 AC060814.1-201ENST00000554326 538 ntBASIC32.8■■■□□ 2.84
COL15A1P39059 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC32.8■■■□□ 2.84
COL15A1P39059 GXYLT1-201ENST00000280876 1937 ntAPPRIS ALT2 TSL 1 (best) BASIC32.8■■■□□ 2.84
COL15A1P39059 FSD1L-208ENST00000495708 1906 ntTSL 1 (best) BASIC32.8■■■□□ 2.84
COL15A1P39059 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC32.79■■■□□ 2.84
COL15A1P39059 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC32.79■■■□□ 2.84
COL15A1P39059 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC32.78■■■□□ 2.84
COL15A1P39059 TPRG1L-202ENST00000378344 2414 ntAPPRIS P1 TSL 2 BASIC32.78■■■□□ 2.84
COL15A1P39059 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC32.78■■■□□ 2.84
COL15A1P39059 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC32.77■■■□□ 2.84
COL15A1P39059 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC32.77■■■□□ 2.84
COL15A1P39059 PHF23-201ENST00000320316 2037 ntAPPRIS P1 TSL 1 (best) BASIC32.77■■■□□ 2.84
COL15A1P39059 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC32.76■■■□□ 2.83
COL15A1P39059 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC32.74■■■□□ 2.83
COL15A1P39059 TMEM158-201ENST00000503771 1813 ntAPPRIS P1 BASIC32.73■■■□□ 2.83
COL15A1P39059 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC32.73■■■□□ 2.83
COL15A1P39059 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC32.73■■■□□ 2.83
COL15A1P39059 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC32.71■■■□□ 2.83
COL15A1P39059 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC32.7■■■□□ 2.83
COL15A1P39059 RPS2-210ENST00000530225 765 ntTSL 2 BASIC32.7■■■□□ 2.83
Retrieved 100 of 98,524 protein–RNA pairs in 21 ms