Protein–RNA interactions for Protein: P38428

CUE1, Coupling of ubiquitin conjugation to ER degradation protein 1, yeastyeast

Predictions only

Length 203 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
CUE1P38428 ADH3YMR083W 1128 nt6.85□□□□□ -1.31
CUE1P38428 YPT11YNL304W 1254 nt6.85□□□□□ -1.31
CUE1P38428 PMA2YPL036W 2844 nt6.84□□□□□ -1.31
CUE1P38428 ECM10YEL030W 1935 nt6.84□□□□□ -1.31
CUE1P38428 YKR012CYKR012C 378 nt6.84□□□□□ -1.31
CUE1P38428 AAT1YKL106W 1356 nt6.83□□□□□ -1.32
CUE1P38428 PRC1YMR297W 1599 nt6.83□□□□□ -1.32
CUE1P38428 YMC2YBR104W 990 nt6.83□□□□□ -1.32
CUE1P38428 FTH1YBR207W 1398 nt6.82□□□□□ -1.32
CUE1P38428 TMS1YDR105C 1422 nt6.82□□□□□ -1.32
CUE1P38428 MRS4YKR052C 915 nt6.81□□□□□ -1.32
CUE1P38428 CTF3YLR381W 2202 nt6.81□□□□□ -1.32
CUE1P38428 BEM1YBR200W 1656 nt6.81□□□□□ -1.32
CUE1P38428 YCR025CYCR025C 411 nt6.8□□□□□ -1.32
CUE1P38428 snR86snR86 1004 nt6.8□□□□□ -1.32
CUE1P38428 CHA1YCL064C 1083 nt6.79□□□□□ -1.32
CUE1P38428 tA(AGC)DtA(AGC)D 73 nt6.79□□□□□ -1.32
CUE1P38428 tA(AGC)FtA(AGC)F 73 nt6.79□□□□□ -1.32
CUE1P38428 tA(AGC)GtA(AGC)G 73 nt6.79□□□□□ -1.32
CUE1P38428 tA(AGC)HtA(AGC)H 73 nt6.79□□□□□ -1.32
CUE1P38428 tA(AGC)JtA(AGC)J 73 nt6.79□□□□□ -1.32
CUE1P38428 tA(AGC)K1tA(AGC)K1 73 nt6.79□□□□□ -1.32
CUE1P38428 tA(AGC)K2tA(AGC)K2 73 nt6.79□□□□□ -1.32
CUE1P38428 tA(AGC)LtA(AGC)L 73 nt6.79□□□□□ -1.32
CUE1P38428 tA(AGC)M1tA(AGC)M1 73 nt6.79□□□□□ -1.32
CUE1P38428 tA(AGC)M2tA(AGC)M2 73 nt6.79□□□□□ -1.32
CUE1P38428 tA(AGC)PtA(AGC)P 73 nt6.79□□□□□ -1.32
CUE1P38428 YFR020WYFR020W 699 nt6.79□□□□□ -1.32
CUE1P38428 FLX1YIL134W 936 nt6.79□□□□□ -1.32
CUE1P38428 NDE1YMR145C 1683 nt6.79□□□□□ -1.32
CUE1P38428 SPE4YLR146C 903 nt6.78□□□□□ -1.32
CUE1P38428 YBR056WYBR056W 1506 nt6.77□□□□□ -1.33
CUE1P38428 PMT7YDR307W 1989 nt6.77□□□□□ -1.33
CUE1P38428 LYS20YDL182W 1287 nt6.77□□□□□ -1.33
CUE1P38428 IPL1YPL209C 1104 nt6.77□□□□□ -1.33
CUE1P38428 ERR3YMR323W 1314 nt6.76□□□□□ -1.33
CUE1P38428 ERR1YOR393W 1314 nt6.76□□□□□ -1.33
CUE1P38428 ERR2YPL281C 1314 nt6.76□□□□□ -1.33
CUE1P38428 ERG6YML008C 1152 nt6.75□□□□□ -1.33
CUE1P38428 RIB1YBL033C 1038 nt6.75□□□□□ -1.33
CUE1P38428 ENO1YGR254W 1314 nt6.75□□□□□ -1.33
CUE1P38428 YEL034C-AYEL034C-A 603 nt6.74□□□□□ -1.33
CUE1P38428 MOB1YIL106W 945 nt6.74□□□□□ -1.33
CUE1P38428 SAM50YNL026W 1455 nt6.73□□□□□ -1.33
CUE1P38428 ABP1YCR088W 1779 nt6.73□□□□□ -1.33
CUE1P38428 YCP4YCR004C 744 nt6.73□□□□□ -1.33
CUE1P38428 SOD2YHR008C 702 nt6.73□□□□□ -1.33
CUE1P38428 SRP102YKL154W 735 nt6.73□□□□□ -1.33
CUE1P38428 YIA6YIL006W 1122 nt6.72□□□□□ -1.33
CUE1P38428 RSM7YJR113C 744 nt6.72□□□□□ -1.33
CUE1P38428 YMR253CYMR253C 1245 nt6.72□□□□□ -1.33
CUE1P38428 LEA1YPL213W 717 nt6.72□□□□□ -1.33
CUE1P38428 YPL264CYPL264C 1062 nt6.72□□□□□ -1.33
CUE1P38428 RNA170RNA170 169 nt6.71□□□□□ -1.34
CUE1P38428 YJL045WYJL045W 1905 nt6.7□□□□□ -1.34
CUE1P38428 YIR035CYIR035C 765 nt6.7□□□□□ -1.34
CUE1P38428 YJR154WYJR154W 1041 nt6.7□□□□□ -1.34
CUE1P38428 MAM3YOL060C 2121 nt6.7□□□□□ -1.34
CUE1P38428 CYC3YAL039C 810 nt6.69□□□□□ -1.34
CUE1P38428 BUB2YMR055C 921 nt6.69□□□□□ -1.34
CUE1P38428 AQR1YNL065W 1761 nt6.69□□□□□ -1.34
CUE1P38428 YIL108WYIL108W 2091 nt6.69□□□□□ -1.34
CUE1P38428 MEP1YGR121C 1479 nt6.68□□□□□ -1.34
CUE1P38428 YLR280CYLR280C 351 nt6.68□□□□□ -1.34
CUE1P38428 HIS3YOR202W 663 nt6.68□□□□□ -1.34
CUE1P38428 YJL009WYJL009W 327 nt6.67□□□□□ -1.34
CUE1P38428 YJR149WYJR149W 1215 nt6.67□□□□□ -1.34
CUE1P38428 ATO2YNR002C 849 nt6.67□□□□□ -1.34
CUE1P38428 ERO1YML130C 1692 nt6.67□□□□□ -1.34
CUE1P38428 YEL023CYEL023C 2049 nt6.67□□□□□ -1.34
CUE1P38428 YNL040WYNL040W 1371 nt6.67□□□□□ -1.34
CUE1P38428 HXT9YJL219W 1704 nt6.66□□□□□ -1.34
CUE1P38428 AFG2YLR397C 2343 nt6.65□□□□□ -1.34
CUE1P38428 SER2YGR208W 930 nt6.65□□□□□ -1.34
CUE1P38428 MET22YOL064C 1074 nt6.65□□□□□ -1.34
CUE1P38428 YER152CYER152C 1332 nt6.65□□□□□ -1.35
CUE1P38428 HXT13YEL069C 1695 nt6.65□□□□□ -1.35
CUE1P38428 STF1YDL130W-A 261 nt6.64□□□□□ -1.35
CUE1P38428 RRT6YGL146C 936 nt6.64□□□□□ -1.35
CUE1P38428 MAS2YHR024C 1449 nt6.64□□□□□ -1.35
CUE1P38428 BUD31YCR063W 474 nt6.63□□□□□ -1.35
CUE1P38428 LRO1YNR008W 1986 nt6.63□□□□□ -1.35
CUE1P38428 DIP5YPL265W 1827 nt6.63□□□□□ -1.35
CUE1P38428 CCR4YAL021C 2514 nt6.62□□□□□ -1.35
CUE1P38428 POB3YML069W 1659 nt6.62□□□□□ -1.35
CUE1P38428 PDC6YGR087C 1692 nt6.61□□□□□ -1.35
CUE1P38428 EHT1YBR177C 1356 nt6.61□□□□□ -1.35
CUE1P38428 SWM1YDR260C 513 nt6.61□□□□□ -1.35
CUE1P38428 CHS7YHR142W 951 nt6.61□□□□□ -1.35
CUE1P38428 YMR007WYMR007W 381 nt6.61□□□□□ -1.35
CUE1P38428 OCH1YGL038C 1443 nt6.6□□□□□ -1.35
CUE1P38428 TGA1tA(UGC)A 73 nt6.6□□□□□ -1.35
CUE1P38428 tA(UGC)EtA(UGC)E 73 nt6.6□□□□□ -1.35
CUE1P38428 tA(UGC)GtA(UGC)G 73 nt6.6□□□□□ -1.35
CUE1P38428 tA(UGC)LtA(UGC)L 73 nt6.6□□□□□ -1.35
CUE1P38428 tA(UGC)OtA(UGC)O 73 nt6.6□□□□□ -1.35
CUE1P38428 GLY1YEL046C 1164 nt6.6□□□□□ -1.35
CUE1P38428 YLR460CYLR460C 1131 nt6.6□□□□□ -1.35
CUE1P38428 RCR1YBR005W 642 nt6.6□□□□□ -1.35
CUE1P38428 FCY1YPR062W 477 nt6.6□□□□□ -1.35
Retrieved 100 of 7,029 protein–RNA pairs in 43.1 ms