Protein–RNA interactions for Protein: P35582

Foxa1, Hepatocyte nuclear factor 3-alpha, mousemouse

Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxa1P35582 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
Foxa1P35582 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC21.85■■□□□ 1.09
Foxa1P35582 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Foxa1P35582 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
Foxa1P35582 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
Foxa1P35582 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
Foxa1P35582 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC21.84■■□□□ 1.09
Foxa1P35582 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
Foxa1P35582 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
Foxa1P35582 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
Foxa1P35582 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC21.82■■□□□ 1.08
Foxa1P35582 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC21.82■■□□□ 1.08
Foxa1P35582 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC21.81■■□□□ 1.08
Foxa1P35582 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
Foxa1P35582 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Foxa1P35582 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Foxa1P35582 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Foxa1P35582 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Foxa1P35582 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Foxa1P35582 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Foxa1P35582 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Foxa1P35582 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Foxa1P35582 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Foxa1P35582 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Foxa1P35582 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
Foxa1P35582 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC21.77■■□□□ 1.08
Foxa1P35582 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
Foxa1P35582 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC21.77■■□□□ 1.07
Foxa1P35582 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC21.76■■□□□ 1.07
Foxa1P35582 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
Foxa1P35582 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Foxa1P35582 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Foxa1P35582 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC21.75■■□□□ 1.07
Foxa1P35582 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Foxa1P35582 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC21.74■■□□□ 1.07
Foxa1P35582 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Foxa1P35582 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
Foxa1P35582 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC21.73■■□□□ 1.07
Foxa1P35582 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Foxa1P35582 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC21.72■■□□□ 1.07
Foxa1P35582 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Foxa1P35582 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Foxa1P35582 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Foxa1P35582 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Foxa1P35582 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Foxa1P35582 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Foxa1P35582 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Foxa1P35582 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
Foxa1P35582 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Foxa1P35582 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC21.71■■□□□ 1.07
Foxa1P35582 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Foxa1P35582 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC21.69■■□□□ 1.06
Foxa1P35582 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Foxa1P35582 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC21.68■■□□□ 1.06
Foxa1P35582 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC21.68■■□□□ 1.06
Foxa1P35582 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Foxa1P35582 Particl-201ENSMUST00000205370 1560 ntBASIC21.68■■□□□ 1.06
Foxa1P35582 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Foxa1P35582 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Foxa1P35582 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC21.67■■□□□ 1.06
Foxa1P35582 Gm37847-201ENSMUST00000192163 1497 ntBASIC21.67■■□□□ 1.06
Foxa1P35582 Gm31748-201ENSMUST00000194938 1497 ntBASIC21.67■■□□□ 1.06
Foxa1P35582 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Foxa1P35582 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Foxa1P35582 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC21.66■■□□□ 1.06
Foxa1P35582 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Foxa1P35582 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC21.65■■□□□ 1.06
Foxa1P35582 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC21.65■■□□□ 1.06
Foxa1P35582 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Foxa1P35582 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC21.64■■□□□ 1.06
Foxa1P35582 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC21.64■■□□□ 1.05
Foxa1P35582 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Foxa1P35582 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Foxa1P35582 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Foxa1P35582 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Foxa1P35582 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC21.62■■□□□ 1.05
Foxa1P35582 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC21.62■■□□□ 1.05
Foxa1P35582 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC21.61■■□□□ 1.05
Foxa1P35582 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
Foxa1P35582 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC21.61■■□□□ 1.05
Foxa1P35582 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Foxa1P35582 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC21.61■■□□□ 1.05
Foxa1P35582 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
Foxa1P35582 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Foxa1P35582 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC21.59■■□□□ 1.05
Foxa1P35582 Gm7432-201ENSMUST00000210343 879 ntBASIC21.59■■□□□ 1.05
Foxa1P35582 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
Foxa1P35582 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC21.59■■□□□ 1.05
Foxa1P35582 AC122428.3-201ENSMUST00000215551 2290 ntBASIC21.58■■□□□ 1.04
Foxa1P35582 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC21.58■■□□□ 1.04
Foxa1P35582 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.04
Foxa1P35582 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Foxa1P35582 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC21.57■■□□□ 1.04
Foxa1P35582 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
Foxa1P35582 AC131739.1-201ENSMUST00000221692 1245 ntBASIC21.57■■□□□ 1.04
Foxa1P35582 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Foxa1P35582 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
Foxa1P35582 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
Foxa1P35582 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC21.56■■□□□ 1.04
Foxa1P35582 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
Retrieved 100 of 76,532 protein–RNA pairs in 26.4 ms