Protein–RNA interactions for Protein: P32247

BRS3, Bombesin receptor subtype-3, humanhuman

Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRS3P32247 ZNF787-203ENST00000610935 1925 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
BRS3P32247 LINC00273-201ENST00000539813 1452 ntBASIC20.82■□□□□ 0.92
BRS3P32247 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC20.82■□□□□ 0.92
BRS3P32247 DCBLD1-201ENST00000296955 1979 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
BRS3P32247 TPRA1-202ENST00000355552 1933 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
BRS3P32247 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC20.81■□□□□ 0.92
BRS3P32247 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
BRS3P32247 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
BRS3P32247 KCTD17-202ENST00000403888 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
BRS3P32247 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC20.8■□□□□ 0.92
BRS3P32247 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC20.8■□□□□ 0.92
BRS3P32247 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
BRS3P32247 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC20.79■□□□□ 0.92
BRS3P32247 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
BRS3P32247 MIR7108-201ENST00000614319 87 ntBASIC20.79■□□□□ 0.92
BRS3P32247 LINC01971-201ENST00000617888 1048 ntBASIC20.79■□□□□ 0.92
BRS3P32247 FGFRL1-205ENST00000510644 2304 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
BRS3P32247 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
BRS3P32247 CGREF1-203ENST00000402394 1906 ntAPPRIS P2 TSL 2 BASIC20.78■□□□□ 0.92
BRS3P32247 YAP1-204ENST00000526343 2393 ntTSL 5 BASIC20.78■□□□□ 0.92
BRS3P32247 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
BRS3P32247 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
BRS3P32247 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC20.77■□□□□ 0.92
BRS3P32247 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC20.77■□□□□ 0.92
BRS3P32247 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
BRS3P32247 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
BRS3P32247 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
BRS3P32247 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC20.76■□□□□ 0.91
BRS3P32247 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC20.75■□□□□ 0.91
BRS3P32247 EMC10-202ENST00000376918 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
BRS3P32247 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
BRS3P32247 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
BRS3P32247 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC20.75■□□□□ 0.91
BRS3P32247 AP004833.2-201ENST00000532228 1454 ntBASIC20.75■□□□□ 0.91
BRS3P32247 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
BRS3P32247 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
BRS3P32247 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC20.74■□□□□ 0.91
BRS3P32247 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
BRS3P32247 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
BRS3P32247 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
BRS3P32247 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
BRS3P32247 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
BRS3P32247 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
BRS3P32247 GIPC1-203ENST00000393033 1926 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
BRS3P32247 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
BRS3P32247 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
BRS3P32247 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
BRS3P32247 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
BRS3P32247 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
BRS3P32247 AC135983.2-203ENST00000454486 1613 ntBASIC20.71■□□□□ 0.91
BRS3P32247 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC20.71■□□□□ 0.91
BRS3P32247 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
BRS3P32247 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
BRS3P32247 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
BRS3P32247 SLC16A11-201ENST00000308009 1803 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
BRS3P32247 AGPS-202ENST00000409888 815 ntTSL 4 BASIC20.7■□□□□ 0.9
BRS3P32247 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC20.7■□□□□ 0.9
BRS3P32247 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC20.7■□□□□ 0.9
BRS3P32247 DUX4L11-201ENST00000611504 1267 ntBASIC20.7■□□□□ 0.9
BRS3P32247 DUX4L12-201ENST00000614593 1267 ntBASIC20.7■□□□□ 0.9
BRS3P32247 DUX4L14-201ENST00000621227 1267 ntBASIC20.7■□□□□ 0.9
BRS3P32247 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC20.7■□□□□ 0.9
BRS3P32247 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
BRS3P32247 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC20.69■□□□□ 0.9
BRS3P32247 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
BRS3P32247 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
BRS3P32247 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
BRS3P32247 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
BRS3P32247 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC20.68■□□□□ 0.9
BRS3P32247 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
BRS3P32247 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
BRS3P32247 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC20.67■□□□□ 0.9
BRS3P32247 SIRT3-201ENST00000382743 2543 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
BRS3P32247 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
BRS3P32247 PVT1-219ENST00000523427 938 ntTSL 3 BASIC20.67■□□□□ 0.9
BRS3P32247 RNF166-209ENST00000567844 633 ntTSL 5 BASIC20.67■□□□□ 0.9
BRS3P32247 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
BRS3P32247 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
BRS3P32247 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
BRS3P32247 CUL4A-202ENST00000375440 2364 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
BRS3P32247 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
BRS3P32247 WHAMMP2-203ENST00000563942 1603 ntBASIC20.65■□□□□ 0.9
BRS3P32247 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
BRS3P32247 MEST-211ENST00000437945 1455 ntTSL 5 BASIC20.65■□□□□ 0.9
BRS3P32247 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
BRS3P32247 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC20.65■□□□□ 0.9
BRS3P32247 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
BRS3P32247 AL139393.2-201ENST00000608721 2025 ntBASIC20.65■□□□□ 0.9
BRS3P32247 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC20.64■□□□□ 0.9
BRS3P32247 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC20.64■□□□□ 0.89
BRS3P32247 DUX4L13-201ENST00000554103 1267 ntBASIC20.64■□□□□ 0.89
BRS3P32247 DUX4L15-201ENST00000611059 1267 ntBASIC20.64■□□□□ 0.89
BRS3P32247 DUX4L23-201ENST00000615195 1269 ntBASIC20.64■□□□□ 0.89
BRS3P32247 DUX4L24-201ENST00000617576 1269 ntBASIC20.64■□□□□ 0.89
BRS3P32247 DUX4L22-201ENST00000618238 1269 ntBASIC20.64■□□□□ 0.89
BRS3P32247 DUX4L20-201ENST00000619712 1269 ntBASIC20.64■□□□□ 0.89
BRS3P32247 DUX4L21-201ENST00000622058 1269 ntBASIC20.64■□□□□ 0.89
BRS3P32247 DUX4L10-201ENST00000622460 1267 ntBASIC20.64■□□□□ 0.89
BRS3P32247 DUX4L25-201ENST00000624915 1269 ntBASIC20.64■□□□□ 0.89
BRS3P32247 CHML-204ENST00000638121 920 ntTSL 2 BASIC20.64■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 65.5 ms