Protein–RNA interactions for Protein: P30681

Hmgb2, High mobility group protein B2, mousemouse

Known RBP Predictions only

Length 210 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb2P30681 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC30.42■■■□□ 2.46
Hmgb2P30681 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC30.42■■■□□ 2.46
Hmgb2P30681 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC30.42■■■□□ 2.46
Hmgb2P30681 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC30.4■■■□□ 2.46
Hmgb2P30681 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC30.4■■■□□ 2.46
Hmgb2P30681 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC30.39■■■□□ 2.46
Hmgb2P30681 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC30.39■■■□□ 2.46
Hmgb2P30681 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC30.39■■■□□ 2.46
Hmgb2P30681 Gm13889-201ENSMUST00000099689 1386 ntBASIC30.39■■■□□ 2.45
Hmgb2P30681 Gm15039-201ENSMUST00000118914 875 ntBASIC30.38■■■□□ 2.45
Hmgb2P30681 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC30.38■■■□□ 2.45
Hmgb2P30681 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC30.38■■■□□ 2.45
Hmgb2P30681 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC30.36■■■□□ 2.45
Hmgb2P30681 Gm12818-201ENSMUST00000117562 1349 ntBASIC30.36■■■□□ 2.45
Hmgb2P30681 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC30.36■■■□□ 2.45
Hmgb2P30681 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC30.35■■■□□ 2.45
Hmgb2P30681 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC30.35■■■□□ 2.45
Hmgb2P30681 Gm45364-201ENSMUST00000210883 159 ntBASIC30.35■■■□□ 2.45
Hmgb2P30681 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC30.35■■■□□ 2.45
Hmgb2P30681 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC30.34■■■□□ 2.45
Hmgb2P30681 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC30.34■■■□□ 2.45
Hmgb2P30681 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC30.34■■■□□ 2.45
Hmgb2P30681 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC30.32■■■□□ 2.44
Hmgb2P30681 Gm37136-201ENSMUST00000194368 194 ntBASIC30.32■■■□□ 2.44
Hmgb2P30681 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC30.31■■■□□ 2.44
Hmgb2P30681 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC30.31■■■□□ 2.44
Hmgb2P30681 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC30.31■■■□□ 2.44
Hmgb2P30681 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC30.3■■■□□ 2.44
Hmgb2P30681 Gm14523-201ENSMUST00000117260 558 ntBASIC30.3■■■□□ 2.44
Hmgb2P30681 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC30.3■■■□□ 2.44
Hmgb2P30681 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC30.3■■■□□ 2.44
Hmgb2P30681 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC30.3■■■□□ 2.44
Hmgb2P30681 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC30.3■■■□□ 2.44
Hmgb2P30681 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC30.28■■■□□ 2.44
Hmgb2P30681 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC30.27■■■□□ 2.44
Hmgb2P30681 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC30.27■■■□□ 2.44
Hmgb2P30681 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC30.26■■■□□ 2.43
Hmgb2P30681 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC30.26■■■□□ 2.43
Hmgb2P30681 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC30.26■■■□□ 2.43
Hmgb2P30681 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC30.25■■■□□ 2.43
Hmgb2P30681 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC30.24■■■□□ 2.43
Hmgb2P30681 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC30.24■■■□□ 2.43
Hmgb2P30681 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC30.24■■■□□ 2.43
Hmgb2P30681 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC30.23■■■□□ 2.43
Hmgb2P30681 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC30.23■■■□□ 2.43
Hmgb2P30681 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC30.2■■■□□ 2.43
Hmgb2P30681 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC30.2■■■□□ 2.43
Hmgb2P30681 Gm5812-201ENSMUST00000061073 957 ntBASIC30.2■■■□□ 2.43
Hmgb2P30681 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC30.2■■■□□ 2.42
Hmgb2P30681 Gm5067-201ENSMUST00000170449 1009 ntBASIC30.19■■■□□ 2.42
Hmgb2P30681 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC30.18■■■□□ 2.42
Hmgb2P30681 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC30.18■■■□□ 2.42
Hmgb2P30681 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC30.18■■■□□ 2.42
Hmgb2P30681 Gm27502-201ENSMUST00000183495 199 ntBASIC30.17■■■□□ 2.42
Hmgb2P30681 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC30.17■■■□□ 2.42
Hmgb2P30681 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC30.17■■■□□ 2.42
Hmgb2P30681 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC30.15■■■□□ 2.42
Hmgb2P30681 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC30.15■■■□□ 2.42
Hmgb2P30681 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC30.14■■■□□ 2.42
Hmgb2P30681 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC30.14■■■□□ 2.42
Hmgb2P30681 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC30.13■■■□□ 2.41
Hmgb2P30681 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC30.13■■■□□ 2.41
Hmgb2P30681 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC30.12■■■□□ 2.41
Hmgb2P30681 Gm9812-201ENSMUST00000061934 968 ntBASIC30.12■■■□□ 2.41
Hmgb2P30681 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC30.12■■■□□ 2.41
Hmgb2P30681 Gm9905-201ENSMUST00000065740 1845 ntBASIC30.12■■■□□ 2.41
Hmgb2P30681 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC30.12■■■□□ 2.41
Hmgb2P30681 Gm5921-201ENSMUST00000075898 882 ntBASIC30.11■■■□□ 2.41
Hmgb2P30681 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC30.1■■■□□ 2.41
Hmgb2P30681 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC30.1■■■□□ 2.41
Hmgb2P30681 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC30.1■■■□□ 2.41
Hmgb2P30681 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC30.09■■■□□ 2.41
Hmgb2P30681 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC30.08■■■□□ 2.41
Hmgb2P30681 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC30.08■■■□□ 2.41
Hmgb2P30681 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC30.08■■■□□ 2.41
Hmgb2P30681 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC30.07■■■□□ 2.4
Hmgb2P30681 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC30.07■■■□□ 2.4
Hmgb2P30681 Gm10420-201ENSMUST00000121713 882 ntBASIC30.06■■■□□ 2.4
Hmgb2P30681 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC30.06■■■□□ 2.4
Hmgb2P30681 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC30.06■■■□□ 2.4
Hmgb2P30681 Gm22567-201ENSMUST00000175542 342 ntBASIC30.05■■■□□ 2.4
Hmgb2P30681 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC30.04■■■□□ 2.4
Hmgb2P30681 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC30.04■■■□□ 2.4
Hmgb2P30681 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC30.04■■■□□ 2.4
Hmgb2P30681 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC30.03■■■□□ 2.4
Hmgb2P30681 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC30.03■■■□□ 2.4
Hmgb2P30681 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC30.03■■■□□ 2.4
Hmgb2P30681 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC30.02■■■□□ 2.4
Hmgb2P30681 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC30.02■■■□□ 2.4
Hmgb2P30681 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC30.02■■■□□ 2.4
Hmgb2P30681 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC30.02■■■□□ 2.4
Hmgb2P30681 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC30.01■■■□□ 2.39
Hmgb2P30681 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC30.01■■■□□ 2.39
Hmgb2P30681 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC30.01■■■□□ 2.39
Hmgb2P30681 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC30.01■■■□□ 2.39
Hmgb2P30681 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC30.01■■■□□ 2.39
Hmgb2P30681 Gm9910-201ENSMUST00000195385 1550 ntBASIC30.01■■■□□ 2.39
Hmgb2P30681 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC30■■■□□ 2.39
Hmgb2P30681 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC30■■■□□ 2.39
Hmgb2P30681 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC30■■■□□ 2.39
Retrieved 100 of 76,532 protein–RNA pairs in 48.1 ms