Protein–RNA interactions for Protein: P29268

Ctgf, Connective tissue growth factor, mousemouse

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CtgfP29268 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
CtgfP29268 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC22.16■■□□□ 1.14
CtgfP29268 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC22.16■■□□□ 1.14
CtgfP29268 Particl-201ENSMUST00000205370 1560 ntBASIC22.16■■□□□ 1.14
CtgfP29268 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
CtgfP29268 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
CtgfP29268 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC22.15■■□□□ 1.14
CtgfP29268 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC22.15■■□□□ 1.14
CtgfP29268 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC22.15■■□□□ 1.14
CtgfP29268 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC22.15■■□□□ 1.14
CtgfP29268 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
CtgfP29268 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
CtgfP29268 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
CtgfP29268 AC131739.1-201ENSMUST00000221692 1245 ntBASIC22.12■■□□□ 1.13
CtgfP29268 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
CtgfP29268 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
CtgfP29268 Gm11599-201ENSMUST00000118720 878 ntBASIC22.11■■□□□ 1.13
CtgfP29268 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
CtgfP29268 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC22.1■■□□□ 1.13
CtgfP29268 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC22.1■■□□□ 1.13
CtgfP29268 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC22.1■■□□□ 1.13
CtgfP29268 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC22.07■■□□□ 1.12
CtgfP29268 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC22.06■■□□□ 1.12
CtgfP29268 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
CtgfP29268 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
CtgfP29268 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
CtgfP29268 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
CtgfP29268 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
CtgfP29268 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC22.03■■□□□ 1.12
CtgfP29268 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
CtgfP29268 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
CtgfP29268 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
CtgfP29268 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC22.02■■□□□ 1.12
CtgfP29268 Gm5987-201ENSMUST00000196433 1151 ntBASIC22.02■■□□□ 1.12
CtgfP29268 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC22.01■■□□□ 1.11
CtgfP29268 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC22.01■■□□□ 1.11
CtgfP29268 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC22■■□□□ 1.11
CtgfP29268 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
CtgfP29268 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC21.99■■□□□ 1.11
CtgfP29268 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
CtgfP29268 Gm37136-201ENSMUST00000194368 194 ntBASIC21.98■■□□□ 1.11
CtgfP29268 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
CtgfP29268 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
CtgfP29268 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC21.97■■□□□ 1.11
CtgfP29268 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
CtgfP29268 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC21.97■■□□□ 1.11
CtgfP29268 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
CtgfP29268 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC21.97■■□□□ 1.11
CtgfP29268 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
CtgfP29268 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
CtgfP29268 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC21.95■■□□□ 1.1
CtgfP29268 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC21.95■■□□□ 1.1
CtgfP29268 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
CtgfP29268 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC21.94■■□□□ 1.1
CtgfP29268 Gm37847-201ENSMUST00000192163 1497 ntBASIC21.94■■□□□ 1.1
CtgfP29268 Gm31748-201ENSMUST00000194938 1497 ntBASIC21.94■■□□□ 1.1
CtgfP29268 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC21.94■■□□□ 1.1
CtgfP29268 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
CtgfP29268 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC21.93■■□□□ 1.1
CtgfP29268 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC21.93■■□□□ 1.1
CtgfP29268 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
CtgfP29268 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
CtgfP29268 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC21.92■■□□□ 1.1
CtgfP29268 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
CtgfP29268 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
CtgfP29268 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
CtgfP29268 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
CtgfP29268 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
CtgfP29268 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
CtgfP29268 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
CtgfP29268 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC21.9■■□□□ 1.1
CtgfP29268 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
CtgfP29268 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC21.89■■□□□ 1.09
CtgfP29268 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
CtgfP29268 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
CtgfP29268 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC21.88■■□□□ 1.09
CtgfP29268 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
CtgfP29268 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
CtgfP29268 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
CtgfP29268 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
CtgfP29268 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC21.87■■□□□ 1.09
CtgfP29268 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
CtgfP29268 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
CtgfP29268 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
CtgfP29268 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC21.85■■□□□ 1.09
CtgfP29268 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
CtgfP29268 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC21.85■■□□□ 1.09
CtgfP29268 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC21.84■■□□□ 1.09
CtgfP29268 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC21.84■■□□□ 1.09
CtgfP29268 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
CtgfP29268 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
CtgfP29268 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC21.84■■□□□ 1.09
CtgfP29268 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
CtgfP29268 Gm14121-201ENSMUST00000121441 1380 ntBASIC21.82■■□□□ 1.08
CtgfP29268 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CtgfP29268 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CtgfP29268 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC21.81■■□□□ 1.08
CtgfP29268 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC21.81■■□□□ 1.08
CtgfP29268 AC167019.3-201ENSMUST00000228225 1266 ntBASIC21.81■■□□□ 1.08
CtgfP29268 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC21.8■■□□□ 1.08
Retrieved 100 of 76,532 protein–RNA pairs in 16.4 ms