Protein–RNA interactions for Protein: P25847

MSH2, DNA mismatch repair protein MSH2, yeastyeast

Predictions only

Length 964 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
MSH2P25847 ALR1YOL130W 2580 nt8.47□□□□□ -1.05
MSH2P25847 YMR206WYMR206W 942 nt8.47□□□□□ -1.05
MSH2P25847 ECM27YJR106W 2178 nt8.46□□□□□ -1.05
MSH2P25847 UFD1YGR048W 1086 nt8.46□□□□□ -1.06
MSH2P25847 LPD1YFL018C 1500 nt8.45□□□□□ -1.06
MSH2P25847 MRP1YDR347W 966 nt8.45□□□□□ -1.06
MSH2P25847 YGR210CYGR210C 1236 nt8.45□□□□□ -1.06
MSH2P25847 YLR173WYLR173W 1827 nt8.45□□□□□ -1.06
MSH2P25847 NAM8YHR086W 1572 nt8.44□□□□□ -1.06
MSH2P25847 SNU66YOR308C 1764 nt8.43□□□□□ -1.06
MSH2P25847 TGA1tA(UGC)A 73 nt8.43□□□□□ -1.06
MSH2P25847 tA(UGC)EtA(UGC)E 73 nt8.43□□□□□ -1.06
MSH2P25847 tA(UGC)GtA(UGC)G 73 nt8.43□□□□□ -1.06
MSH2P25847 tA(UGC)LtA(UGC)L 73 nt8.43□□□□□ -1.06
MSH2P25847 tA(UGC)OtA(UGC)O 73 nt8.43□□□□□ -1.06
MSH2P25847 TOM71YHR117W 1920 nt8.42□□□□□ -1.06
MSH2P25847 ERO1YML130C 1692 nt8.41□□□□□ -1.06
MSH2P25847 YKR023WYKR023W 1593 nt8.41□□□□□ -1.06
MSH2P25847 GPM1YKL152C 744 nt8.41□□□□□ -1.06
MSH2P25847 EMC3YKL207W 762 nt8.41□□□□□ -1.06
MSH2P25847 YNL067W-AYNL067W-A 147 nt8.41□□□□□ -1.06
MSH2P25847 SRP54YPR088C 1626 nt8.4□□□□□ -1.06
MSH2P25847 NPP2YEL016C 1482 nt8.4□□□□□ -1.06
MSH2P25847 tE(CUC)DtE(CUC)D 72 nt8.4□□□□□ -1.06
MSH2P25847 tE(CUC)ItE(CUC)I 72 nt8.4□□□□□ -1.06
MSH2P25847 SBP1YHL034C 885 nt8.4□□□□□ -1.06
MSH2P25847 SAN1YDR143C 1833 nt8.4□□□□□ -1.07
MSH2P25847 FIT1YDR534C 1587 nt8.39□□□□□ -1.07
MSH2P25847 YJL160CYJL160C 864 nt8.39□□□□□ -1.07
MSH2P25847 YKR012CYKR012C 378 nt8.39□□□□□ -1.07
MSH2P25847 FCY1YPR062W 477 nt8.39□□□□□ -1.07
MSH2P25847 SDS24YBR214W 1584 nt8.39□□□□□ -1.07
MSH2P25847 YPL277CYPL277C 1464 nt8.38□□□□□ -1.07
MSH2P25847 REX2YLR059C 810 nt8.37□□□□□ -1.07
MSH2P25847 YPL108WYPL108W 507 nt8.37□□□□□ -1.07
MSH2P25847 YMC2YBR104W 990 nt8.37□□□□□ -1.07
MSH2P25847 GGA2YHR108W 1758 nt8.37□□□□□ -1.07
MSH2P25847 ENO1YGR254W 1314 nt8.36□□□□□ -1.07
MSH2P25847 YLR280CYLR280C 351 nt8.36□□□□□ -1.07
MSH2P25847 YBL095WYBL095W 813 nt8.36□□□□□ -1.07
MSH2P25847 MIM1YOL026C 342 nt8.36□□□□□ -1.07
MSH2P25847 THI3YDL080C 1830 nt8.34□□□□□ -1.07
MSH2P25847 tL(UAA)B1tL(UAA)B1 84 nt8.34□□□□□ -1.07
MSH2P25847 tL(UAA)B2tL(UAA)B2 84 nt8.34□□□□□ -1.07
MSH2P25847 tL(UAA)DtL(UAA)D 84 nt8.34□□□□□ -1.07
MSH2P25847 SUP51tL(UAA)J 84 nt8.34□□□□□ -1.07
MSH2P25847 tL(UAA)KtL(UAA)K 84 nt8.34□□□□□ -1.07
MSH2P25847 tL(UAA)LtL(UAA)L 84 nt8.34□□□□□ -1.07
MSH2P25847 tL(UAA)NtL(UAA)N 84 nt8.34□□□□□ -1.07
MSH2P25847 UBP13YBL067C 2244 nt8.34□□□□□ -1.07
MSH2P25847 FET5YFL041W 1869 nt8.34□□□□□ -1.07
MSH2P25847 GAS1YMR307W 1680 nt8.34□□□□□ -1.08
MSH2P25847 PTC6YCR079W 1329 nt8.33□□□□□ -1.08
MSH2P25847 tD(GUC)BtD(GUC)B 72 nt8.33□□□□□ -1.08
MSH2P25847 tD(GUC)DtD(GUC)D 72 nt8.33□□□□□ -1.08
MSH2P25847 tD(GUC)G1tD(GUC)G1 72 nt8.33□□□□□ -1.08
MSH2P25847 tD(GUC)G2tD(GUC)G2 72 nt8.33□□□□□ -1.08
MSH2P25847 tD(GUC)I1tD(GUC)I1 72 nt8.33□□□□□ -1.08
MSH2P25847 tD(GUC)I2tD(GUC)I2 72 nt8.33□□□□□ -1.08
MSH2P25847 tD(GUC)J1tD(GUC)J1 72 nt8.33□□□□□ -1.08
MSH2P25847 tD(GUC)J2tD(GUC)J2 72 nt8.33□□□□□ -1.08
MSH2P25847 tD(GUC)J3tD(GUC)J3 72 nt8.33□□□□□ -1.08
MSH2P25847 tD(GUC)J4tD(GUC)J4 72 nt8.33□□□□□ -1.08
MSH2P25847 tD(GUC)KtD(GUC)K 72 nt8.33□□□□□ -1.08
MSH2P25847 tD(GUC)L1tD(GUC)L1 72 nt8.33□□□□□ -1.08
MSH2P25847 tD(GUC)L2tD(GUC)L2 72 nt8.33□□□□□ -1.08
MSH2P25847 tD(GUC)MtD(GUC)M 72 nt8.33□□□□□ -1.08
MSH2P25847 tD(GUC)OtD(GUC)O 72 nt8.33□□□□□ -1.08
MSH2P25847 YJL211CYJL211C 444 nt8.33□□□□□ -1.08
MSH2P25847 YMR210WYMR210W 1350 nt8.33□□□□□ -1.08
MSH2P25847 YJL045WYJL045W 1905 nt8.33□□□□□ -1.08
MSH2P25847 KAE1YKR038C 1161 nt8.32□□□□□ -1.08
MSH2P25847 VBA3YCL069W 1377 nt8.32□□□□□ -1.08
MSH2P25847 GDH1YOR375C 1365 nt8.32□□□□□ -1.08
MSH2P25847 MAK32YCR019W 1092 nt8.31□□□□□ -1.08
MSH2P25847 REG2YBR050C 1017 nt8.31□□□□□ -1.08
MSH2P25847 AAT1YKL106W 1356 nt8.31□□□□□ -1.08
MSH2P25847 ADE2YOR128C 1716 nt8.3□□□□□ -1.08
MSH2P25847 YMR316C-BYMR316C-B 309 nt8.3□□□□□ -1.08
MSH2P25847 EEB1YPL095C 1371 nt8.28□□□□□ -1.08
MSH2P25847 SWP1YMR149W 861 nt8.28□□□□□ -1.08
MSH2P25847 YHM2YMR241W 945 nt8.28□□□□□ -1.08
MSH2P25847 PRE5YMR314W 705 nt8.28□□□□□ -1.08
MSH2P25847 YPT11YNL304W 1254 nt8.28□□□□□ -1.08
MSH2P25847 BAP3YDR046C 1815 nt8.28□□□□□ -1.08
MSH2P25847 YPL247CYPL247C 1572 nt8.27□□□□□ -1.09
MSH2P25847 MRS4YKR052C 915 nt8.27□□□□□ -1.09
MSH2P25847 TRP2YER090W 1524 nt8.26□□□□□ -1.09
MSH2P25847 HBS1YKR084C 1836 nt8.26□□□□□ -1.09
MSH2P25847 ADA2YDR448W 1305 nt8.26□□□□□ -1.09
MSH2P25847 SDH8YBR269C 417 nt8.25□□□□□ -1.09
MSH2P25847 THI6YPL214C 1623 nt8.23□□□□□ -1.09
MSH2P25847 TAD2YJL035C 753 nt8.23□□□□□ -1.09
MSH2P25847 YEL023CYEL023C 2049 nt8.22□□□□□ -1.09
MSH2P25847 MET30YIL046W 1923 nt8.22□□□□□ -1.09
MSH2P25847 DUS3YLR401C 2007 nt8.22□□□□□ -1.09
MSH2P25847 HXT11YOL156W 1704 nt8.2□□□□□ -1.1
MSH2P25847 RTG2YGL252C 1767 nt8.2□□□□□ -1.1
MSH2P25847 YJL009WYJL009W 327 nt8.2□□□□□ -1.1
MSH2P25847 RSM7YJR113C 744 nt8.2□□□□□ -1.1
Retrieved 100 of 7,029 protein–RNA pairs in 15.4 ms