Protein–RNA interactions for Protein: P19438

TNFRSF1A, Tumor necrosis factor receptor superfamily member 1A, humanhuman

Predictions only

Length 455 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1AP19438 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
TNFRSF1AP19438 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC21.75■■□□□ 1.07
TNFRSF1AP19438 KCNF1-201ENST00000295082 2289 ntAPPRIS P1 BASIC21.75■■□□□ 1.07
TNFRSF1AP19438 DUX4L13-201ENST00000554103 1267 ntBASIC21.75■■□□□ 1.07
TNFRSF1AP19438 DUX4L15-201ENST00000611059 1267 ntBASIC21.75■■□□□ 1.07
TNFRSF1AP19438 DUX4L23-201ENST00000615195 1269 ntBASIC21.75■■□□□ 1.07
TNFRSF1AP19438 DUX4L24-201ENST00000617576 1269 ntBASIC21.75■■□□□ 1.07
TNFRSF1AP19438 DUX4L22-201ENST00000618238 1269 ntBASIC21.75■■□□□ 1.07
TNFRSF1AP19438 DUX4L20-201ENST00000619712 1269 ntBASIC21.75■■□□□ 1.07
TNFRSF1AP19438 DUX4L21-201ENST00000622058 1269 ntBASIC21.75■■□□□ 1.07
TNFRSF1AP19438 DUX4L10-201ENST00000622460 1267 ntBASIC21.75■■□□□ 1.07
TNFRSF1AP19438 DUX4L25-201ENST00000624915 1269 ntBASIC21.75■■□□□ 1.07
TNFRSF1AP19438 WHAMMP2-203ENST00000563942 1603 ntBASIC21.74■■□□□ 1.07
TNFRSF1AP19438 CHML-204ENST00000638121 920 ntTSL 2 BASIC21.74■■□□□ 1.07
TNFRSF1AP19438 SIRT3-201ENST00000382743 2543 ntAPPRIS P2 TSL 1 (best) BASIC21.74■■□□□ 1.07
TNFRSF1AP19438 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
TNFRSF1AP19438 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
TNFRSF1AP19438 NGB-201ENST00000298352 1884 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
TNFRSF1AP19438 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
TNFRSF1AP19438 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC21.72■■□□□ 1.07
TNFRSF1AP19438 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC21.72■■□□□ 1.07
TNFRSF1AP19438 MEST-211ENST00000437945 1455 ntTSL 5 BASIC21.72■■□□□ 1.07
TNFRSF1AP19438 AL139393.2-201ENST00000608721 2025 ntBASIC21.72■■□□□ 1.07
TNFRSF1AP19438 CUL4A-202ENST00000375440 2364 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
TNFRSF1AP19438 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
TNFRSF1AP19438 FOXA2-202ENST00000419308 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
TNFRSF1AP19438 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
TNFRSF1AP19438 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
TNFRSF1AP19438 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC21.71■■□□□ 1.07
TNFRSF1AP19438 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
TNFRSF1AP19438 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC21.7■■□□□ 1.06
TNFRSF1AP19438 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
TNFRSF1AP19438 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC21.7■■□□□ 1.06
TNFRSF1AP19438 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC21.7■■□□□ 1.06
TNFRSF1AP19438 FGFRL1-205ENST00000510644 2304 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
TNFRSF1AP19438 PLPPR3-204ENST00000520876 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
TNFRSF1AP19438 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC21.7■■□□□ 1.06
TNFRSF1AP19438 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC21.7■■□□□ 1.06
TNFRSF1AP19438 MIR3648-2-201ENST00000581792 180 ntBASIC21.69■■□□□ 1.06
TNFRSF1AP19438 MIR3648-1-201ENST00000615959 180 ntBASIC21.69■■□□□ 1.06
TNFRSF1AP19438 GDI1-215ENST00000630693 786 ntTSL 4 BASIC21.69■■□□□ 1.06
TNFRSF1AP19438 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC21.68■■□□□ 1.06
TNFRSF1AP19438 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
TNFRSF1AP19438 FAM149A-201ENST00000227065 2708 ntAPPRIS P2 TSL 1 (best) BASIC21.68■■□□□ 1.06
TNFRSF1AP19438 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
TNFRSF1AP19438 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC21.68■■□□□ 1.06
TNFRSF1AP19438 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC21.67■■□□□ 1.06
TNFRSF1AP19438 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
TNFRSF1AP19438 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC21.67■■□□□ 1.06
TNFRSF1AP19438 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC21.67■■□□□ 1.06
TNFRSF1AP19438 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
TNFRSF1AP19438 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
TNFRSF1AP19438 CUEDC1-201ENST00000360238 2193 ntAPPRIS P1 TSL 2 BASIC21.66■■□□□ 1.06
TNFRSF1AP19438 BCL3-201ENST00000164227 2038 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
TNFRSF1AP19438 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC21.66■■□□□ 1.06
TNFRSF1AP19438 KIAA2013-202ENST00000376576 2539 ntTSL 2 BASIC21.66■■□□□ 1.06
TNFRSF1AP19438 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
TNFRSF1AP19438 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC21.65■■□□□ 1.06
TNFRSF1AP19438 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC21.65■■□□□ 1.06
TNFRSF1AP19438 CR559946.2-201ENST00000623684 991 ntBASIC21.65■■□□□ 1.06
TNFRSF1AP19438 HES6-205ENST00000409356 528 ntTSL 2 BASIC21.64■■□□□ 1.05
TNFRSF1AP19438 HLA-V-202ENST00000446817 847 ntBASIC21.64■■□□□ 1.05
TNFRSF1AP19438 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC21.64■■□□□ 1.05
TNFRSF1AP19438 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC21.63■■□□□ 1.05
TNFRSF1AP19438 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
TNFRSF1AP19438 CHST11-202ENST00000546689 756 ntTSL 2 BASIC21.63■■□□□ 1.05
TNFRSF1AP19438 AC016575.1-201ENST00000607026 382 ntBASIC21.63■■□□□ 1.05
TNFRSF1AP19438 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC21.63■■□□□ 1.05
TNFRSF1AP19438 RNF130-205ENST00000521389 2263 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
TNFRSF1AP19438 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC21.62■■□□□ 1.05
TNFRSF1AP19438 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC21.62■■□□□ 1.05
TNFRSF1AP19438 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
TNFRSF1AP19438 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
TNFRSF1AP19438 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC21.6■■□□□ 1.05
TNFRSF1AP19438 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
TNFRSF1AP19438 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
TNFRSF1AP19438 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
TNFRSF1AP19438 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
TNFRSF1AP19438 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC21.59■■□□□ 1.05
TNFRSF1AP19438 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC21.59■■□□□ 1.05
TNFRSF1AP19438 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC21.59■■□□□ 1.05
TNFRSF1AP19438 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
TNFRSF1AP19438 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC21.58■■□□□ 1.05
TNFRSF1AP19438 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
TNFRSF1AP19438 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
TNFRSF1AP19438 MIR639-201ENST00000384974 98 ntBASIC21.58■■□□□ 1.05
TNFRSF1AP19438 MBP-237ENST00000579129 1052 ntTSL 5 BASIC21.58■■□□□ 1.05
TNFRSF1AP19438 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC21.58■■□□□ 1.05
TNFRSF1AP19438 AC110285.7-201ENST00000624417 1536 ntBASIC21.58■■□□□ 1.04
TNFRSF1AP19438 ESRRA-201ENST00000000442 2215 ntAPPRIS P3 TSL 1 (best) BASIC21.57■■□□□ 1.04
TNFRSF1AP19438 EFNA1-202ENST00000368407 1926 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
TNFRSF1AP19438 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC21.57■■□□□ 1.04
TNFRSF1AP19438 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC21.57■■□□□ 1.04
TNFRSF1AP19438 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC21.57■■□□□ 1.04
TNFRSF1AP19438 AC100797.4-201ENST00000631653 1827 ntBASIC21.57■■□□□ 1.04
TNFRSF1AP19438 ABCB10P3-201ENST00000561950 2166 ntBASIC21.57■■□□□ 1.04
TNFRSF1AP19438 RTN2-201ENST00000245923 2293 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
TNFRSF1AP19438 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC21.57■■□□□ 1.04
TNFRSF1AP19438 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC21.56■■□□□ 1.04
TNFRSF1AP19438 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC21.56■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 13.2 ms