Protein–RNA interactions for Protein: P13438

Tpbpa, Trophoblast-specific protein alpha, mousemouse

Predictions only

Length 124 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TpbpaP13438 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
TpbpaP13438 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
TpbpaP13438 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
TpbpaP13438 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
TpbpaP13438 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
TpbpaP13438 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC21.22■□□□□ 0.99
TpbpaP13438 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC21.22■□□□□ 0.99
TpbpaP13438 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC21.22■□□□□ 0.99
TpbpaP13438 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
TpbpaP13438 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
TpbpaP13438 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC21.21■□□□□ 0.99
TpbpaP13438 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
TpbpaP13438 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
TpbpaP13438 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC21.2■□□□□ 0.98
TpbpaP13438 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC21.2■□□□□ 0.98
TpbpaP13438 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
TpbpaP13438 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
TpbpaP13438 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC21.2■□□□□ 0.98
TpbpaP13438 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
TpbpaP13438 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
TpbpaP13438 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC21.19■□□□□ 0.98
TpbpaP13438 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC21.19■□□□□ 0.98
TpbpaP13438 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
TpbpaP13438 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
TpbpaP13438 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
TpbpaP13438 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
TpbpaP13438 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
TpbpaP13438 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC21.18■□□□□ 0.98
TpbpaP13438 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC21.18■□□□□ 0.98
TpbpaP13438 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
TpbpaP13438 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
TpbpaP13438 AC124392.1-201ENSMUST00000225172 5324 ntBASIC21.17■□□□□ 0.98
TpbpaP13438 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC21.16■□□□□ 0.98
TpbpaP13438 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC21.15■□□□□ 0.98
TpbpaP13438 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
TpbpaP13438 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
TpbpaP13438 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC21.14■□□□□ 0.98
TpbpaP13438 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
TpbpaP13438 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
TpbpaP13438 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
TpbpaP13438 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC21.13■□□□□ 0.97
TpbpaP13438 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
TpbpaP13438 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC21.13■□□□□ 0.97
TpbpaP13438 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
TpbpaP13438 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC21.13■□□□□ 0.97
TpbpaP13438 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
TpbpaP13438 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
TpbpaP13438 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
TpbpaP13438 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
TpbpaP13438 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC21.1■□□□□ 0.97
TpbpaP13438 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
TpbpaP13438 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC21.1■□□□□ 0.97
TpbpaP13438 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
TpbpaP13438 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
TpbpaP13438 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
TpbpaP13438 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
TpbpaP13438 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC21.08■□□□□ 0.97
TpbpaP13438 Gm43863-201ENSMUST00000203822 1192 ntBASIC21.08■□□□□ 0.97
TpbpaP13438 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
TpbpaP13438 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
TpbpaP13438 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
TpbpaP13438 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
TpbpaP13438 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
TpbpaP13438 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
TpbpaP13438 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC21.06■□□□□ 0.96
TpbpaP13438 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC21.06■□□□□ 0.96
TpbpaP13438 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC21.06■□□□□ 0.96
TpbpaP13438 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
TpbpaP13438 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
TpbpaP13438 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
TpbpaP13438 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
TpbpaP13438 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
TpbpaP13438 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
TpbpaP13438 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
TpbpaP13438 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
TpbpaP13438 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.96
TpbpaP13438 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.96
TpbpaP13438 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC21.02■□□□□ 0.96
TpbpaP13438 AC157572.2-201ENSMUST00000226970 908 ntBASIC21.02■□□□□ 0.96
TpbpaP13438 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
TpbpaP13438 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
TpbpaP13438 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC21.01■□□□□ 0.95
TpbpaP13438 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
TpbpaP13438 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
TpbpaP13438 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC21■□□□□ 0.95
TpbpaP13438 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
TpbpaP13438 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC21■□□□□ 0.95
TpbpaP13438 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
TpbpaP13438 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
TpbpaP13438 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC20.99■□□□□ 0.95
TpbpaP13438 AC122428.3-201ENSMUST00000215551 2290 ntBASIC20.99■□□□□ 0.95
TpbpaP13438 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC20.99■□□□□ 0.95
TpbpaP13438 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
TpbpaP13438 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
TpbpaP13438 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
TpbpaP13438 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
TpbpaP13438 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
TpbpaP13438 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
TpbpaP13438 Zfp131-205ENSMUST00000223812 663 ntBASIC20.98■□□□□ 0.95
TpbpaP13438 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC20.98■□□□□ 0.95
Retrieved 100 of 76,532 protein–RNA pairs in 235.5 ms