Protein–RNA interactions for Protein: P12850

Cxcl1, Growth-regulated alpha protein, mousemouse

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcl1P12850 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Cxcl1P12850 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
Cxcl1P12850 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Cxcl1P12850 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Cxcl1P12850 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Cxcl1P12850 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Cxcl1P12850 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Cxcl1P12850 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Cxcl1P12850 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Cxcl1P12850 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC19.48■□□□□ 0.71
Cxcl1P12850 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
Cxcl1P12850 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
Cxcl1P12850 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Cxcl1P12850 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Cxcl1P12850 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Cxcl1P12850 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Cxcl1P12850 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Cxcl1P12850 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Cxcl1P12850 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC19.47■□□□□ 0.71
Cxcl1P12850 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Cxcl1P12850 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Cxcl1P12850 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Cxcl1P12850 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Cxcl1P12850 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Cxcl1P12850 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC19.45■□□□□ 0.7
Cxcl1P12850 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Cxcl1P12850 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Cxcl1P12850 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Cxcl1P12850 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Cxcl1P12850 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Cxcl1P12850 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
Cxcl1P12850 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
Cxcl1P12850 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
Cxcl1P12850 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Cxcl1P12850 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC19.43■□□□□ 0.7
Cxcl1P12850 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC19.43■□□□□ 0.7
Cxcl1P12850 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Cxcl1P12850 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Cxcl1P12850 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Cxcl1P12850 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Cxcl1P12850 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Cxcl1P12850 Gm43863-201ENSMUST00000203822 1192 ntBASIC19.42■□□□□ 0.7
Cxcl1P12850 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
Cxcl1P12850 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Cxcl1P12850 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
Cxcl1P12850 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Cxcl1P12850 Il17rd-202ENSMUST00000223942 2186 ntBASIC19.41■□□□□ 0.7
Cxcl1P12850 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Cxcl1P12850 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
Cxcl1P12850 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
Cxcl1P12850 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Cxcl1P12850 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Cxcl1P12850 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Cxcl1P12850 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Cxcl1P12850 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
Cxcl1P12850 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
Cxcl1P12850 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Cxcl1P12850 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Cxcl1P12850 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Cxcl1P12850 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Cxcl1P12850 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
Cxcl1P12850 AC157572.2-201ENSMUST00000226970 908 ntBASIC19.38■□□□□ 0.69
Cxcl1P12850 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Cxcl1P12850 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC19.37■□□□□ 0.69
Cxcl1P12850 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Cxcl1P12850 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Cxcl1P12850 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Cxcl1P12850 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Cxcl1P12850 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
Cxcl1P12850 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Cxcl1P12850 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Cxcl1P12850 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Cxcl1P12850 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC19.35■□□□□ 0.69
Cxcl1P12850 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC19.35■□□□□ 0.69
Cxcl1P12850 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Cxcl1P12850 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Cxcl1P12850 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC19.33■□□□□ 0.68
Cxcl1P12850 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Cxcl1P12850 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Cxcl1P12850 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Cxcl1P12850 Gm37847-201ENSMUST00000192163 1497 ntBASIC19.31■□□□□ 0.68
Cxcl1P12850 Gm31748-201ENSMUST00000194938 1497 ntBASIC19.31■□□□□ 0.68
Cxcl1P12850 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Cxcl1P12850 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Cxcl1P12850 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC19.3■□□□□ 0.68
Cxcl1P12850 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC19.3■□□□□ 0.68
Cxcl1P12850 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Cxcl1P12850 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC19.29■□□□□ 0.68
Cxcl1P12850 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC19.29■□□□□ 0.68
Cxcl1P12850 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Cxcl1P12850 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
Cxcl1P12850 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Cxcl1P12850 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
Cxcl1P12850 Particl-201ENSMUST00000205370 1560 ntBASIC19.27■□□□□ 0.67
Cxcl1P12850 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Cxcl1P12850 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC19.26■□□□□ 0.67
Cxcl1P12850 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Cxcl1P12850 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
Cxcl1P12850 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC19.25■□□□□ 0.67
Cxcl1P12850 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 12.3 ms