Protein–RNA interactions for Protein: P10629

Hoxc6, Homeobox protein Hox-C6, mousemouse

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc6P10629 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC26.79■■□□□ 1.88
Hoxc6P10629 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC26.79■■□□□ 1.88
Hoxc6P10629 Gm5786-201ENSMUST00000085368 882 ntBASIC26.79■■□□□ 1.88
Hoxc6P10629 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC26.78■■□□□ 1.88
Hoxc6P10629 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC26.78■■□□□ 1.88
Hoxc6P10629 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC26.77■■□□□ 1.88
Hoxc6P10629 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC26.77■■□□□ 1.88
Hoxc6P10629 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC26.77■■□□□ 1.88
Hoxc6P10629 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC26.77■■□□□ 1.88
Hoxc6P10629 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC26.77■■□□□ 1.88
Hoxc6P10629 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC26.77■■□□□ 1.88
Hoxc6P10629 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC26.77■■□□□ 1.88
Hoxc6P10629 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC26.76■■□□□ 1.88
Hoxc6P10629 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC26.76■■□□□ 1.87
Hoxc6P10629 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC26.75■■□□□ 1.87
Hoxc6P10629 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC26.75■■□□□ 1.87
Hoxc6P10629 Pkd1-207ENSMUST00000228550 1050 ntBASIC26.75■■□□□ 1.87
Hoxc6P10629 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC26.74■■□□□ 1.87
Hoxc6P10629 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC26.73■■□□□ 1.87
Hoxc6P10629 Gm4799-201ENSMUST00000095396 657 ntBASIC26.73■■□□□ 1.87
Hoxc6P10629 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC26.72■■□□□ 1.87
Hoxc6P10629 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC26.72■■□□□ 1.87
Hoxc6P10629 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC26.72■■□□□ 1.87
Hoxc6P10629 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
Hoxc6P10629 Mir3960-201ENSMUST00000198213 73 ntBASIC26.71■■□□□ 1.87
Hoxc6P10629 Gm16437-201ENSMUST00000025669 507 ntBASIC26.71■■□□□ 1.87
Hoxc6P10629 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.87
Hoxc6P10629 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC26.7■■□□□ 1.86
Hoxc6P10629 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC26.69■■□□□ 1.86
Hoxc6P10629 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC26.69■■□□□ 1.86
Hoxc6P10629 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC26.68■■□□□ 1.86
Hoxc6P10629 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
Hoxc6P10629 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC26.67■■□□□ 1.86
Hoxc6P10629 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC26.67■■□□□ 1.86
Hoxc6P10629 Gm45364-201ENSMUST00000210883 159 ntBASIC26.67■■□□□ 1.86
Hoxc6P10629 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC26.67■■□□□ 1.86
Hoxc6P10629 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC26.67■■□□□ 1.86
Hoxc6P10629 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC26.67■■□□□ 1.86
Hoxc6P10629 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC26.67■■□□□ 1.86
Hoxc6P10629 Gm37136-201ENSMUST00000194368 194 ntBASIC26.66■■□□□ 1.86
Hoxc6P10629 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC26.66■■□□□ 1.86
Hoxc6P10629 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC26.66■■□□□ 1.86
Hoxc6P10629 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC26.65■■□□□ 1.86
Hoxc6P10629 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC26.65■■□□□ 1.86
Hoxc6P10629 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
Hoxc6P10629 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC26.64■■□□□ 1.86
Hoxc6P10629 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC26.64■■□□□ 1.86
Hoxc6P10629 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC26.64■■□□□ 1.85
Hoxc6P10629 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC26.63■■□□□ 1.85
Hoxc6P10629 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC26.62■■□□□ 1.85
Hoxc6P10629 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
Hoxc6P10629 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC26.61■■□□□ 1.85
Hoxc6P10629 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC26.61■■□□□ 1.85
Hoxc6P10629 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC26.6■■□□□ 1.85
Hoxc6P10629 Gm9905-201ENSMUST00000065740 1845 ntBASIC26.6■■□□□ 1.85
Hoxc6P10629 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC26.6■■□□□ 1.85
Hoxc6P10629 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC26.6■■□□□ 1.85
Hoxc6P10629 Zxda-201ENSMUST00000117281 2621 ntBASIC26.6■■□□□ 1.85
Hoxc6P10629 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
Hoxc6P10629 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
Hoxc6P10629 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
Hoxc6P10629 Gm13889-201ENSMUST00000099689 1386 ntBASIC26.58■■□□□ 1.84
Hoxc6P10629 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC26.57■■□□□ 1.84
Hoxc6P10629 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
Hoxc6P10629 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC26.57■■□□□ 1.84
Hoxc6P10629 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
Hoxc6P10629 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC26.56■■□□□ 1.84
Hoxc6P10629 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC26.56■■□□□ 1.84
Hoxc6P10629 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC26.55■■□□□ 1.84
Hoxc6P10629 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
Hoxc6P10629 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC26.54■■□□□ 1.84
Hoxc6P10629 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
Hoxc6P10629 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
Hoxc6P10629 Gm12818-201ENSMUST00000117562 1349 ntBASIC26.53■■□□□ 1.84
Hoxc6P10629 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC26.53■■□□□ 1.84
Hoxc6P10629 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
Hoxc6P10629 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC26.52■■□□□ 1.84
Hoxc6P10629 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
Hoxc6P10629 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC26.51■■□□□ 1.83
Hoxc6P10629 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC26.51■■□□□ 1.83
Hoxc6P10629 Gm7332-201ENSMUST00000118351 454 ntBASIC26.51■■□□□ 1.83
Hoxc6P10629 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
Hoxc6P10629 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC26.5■■□□□ 1.83
Hoxc6P10629 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC26.49■■□□□ 1.83
Hoxc6P10629 Gm27502-201ENSMUST00000183495 199 ntBASIC26.49■■□□□ 1.83
Hoxc6P10629 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
Hoxc6P10629 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC26.49■■□□□ 1.83
Hoxc6P10629 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
Hoxc6P10629 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC26.48■■□□□ 1.83
Hoxc6P10629 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC26.48■■□□□ 1.83
Hoxc6P10629 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
Hoxc6P10629 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC26.48■■□□□ 1.83
Hoxc6P10629 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC26.48■■□□□ 1.83
Hoxc6P10629 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
Hoxc6P10629 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC26.47■■□□□ 1.83
Hoxc6P10629 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
Hoxc6P10629 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC26.46■■□□□ 1.83
Hoxc6P10629 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC26.46■■□□□ 1.83
Hoxc6P10629 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
Hoxc6P10629 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC26.44■■□□□ 1.82
Retrieved 100 of 76,532 protein–RNA pairs in 29.7 ms