Protein–RNA interactions for Protein: P0DJI8

SAA1, Serum amyloid A-1 protein, humanhuman

Predicted RBP Predictions only

Length 122 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SAA1P0DJI8 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC20.62■□□□□ 0.89
SAA1P0DJI8 HYAL2-202ENST00000395139 2136 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SAA1P0DJI8 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
SAA1P0DJI8 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
SAA1P0DJI8 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SAA1P0DJI8 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SAA1P0DJI8 DUX4L28-201ENST00000623687 678 ntBASIC20.62■□□□□ 0.89
SAA1P0DJI8 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
SAA1P0DJI8 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SAA1P0DJI8 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SAA1P0DJI8 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
SAA1P0DJI8 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC20.61■□□□□ 0.89
SAA1P0DJI8 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SAA1P0DJI8 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
SAA1P0DJI8 PROC-203ENST00000409048 1586 ntTSL 5 BASIC20.6■□□□□ 0.89
SAA1P0DJI8 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
SAA1P0DJI8 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC20.6■□□□□ 0.89
SAA1P0DJI8 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC20.6■□□□□ 0.89
SAA1P0DJI8 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
SAA1P0DJI8 AC108673.1-201ENST00000510422 1159 ntBASIC20.6■□□□□ 0.89
SAA1P0DJI8 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC20.6■□□□□ 0.89
SAA1P0DJI8 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
SAA1P0DJI8 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
SAA1P0DJI8 CCND3-203ENST00000372991 2085 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SAA1P0DJI8 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC20.59■□□□□ 0.89
SAA1P0DJI8 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SAA1P0DJI8 AC100797.4-201ENST00000631653 1827 ntBASIC20.59■□□□□ 0.89
SAA1P0DJI8 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SAA1P0DJI8 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
SAA1P0DJI8 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC20.58■□□□□ 0.89
SAA1P0DJI8 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC20.58■□□□□ 0.89
SAA1P0DJI8 MIR3665-201ENST00000578708 105 ntBASIC20.58■□□□□ 0.89
SAA1P0DJI8 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC20.58■□□□□ 0.88
SAA1P0DJI8 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC20.57■□□□□ 0.88
SAA1P0DJI8 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC20.56■□□□□ 0.88
SAA1P0DJI8 MIR6090-201ENST00000622481 60 ntBASIC20.56■□□□□ 0.88
SAA1P0DJI8 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SAA1P0DJI8 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
SAA1P0DJI8 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SAA1P0DJI8 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC20.55■□□□□ 0.88
SAA1P0DJI8 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
SAA1P0DJI8 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
SAA1P0DJI8 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC20.55■□□□□ 0.88
SAA1P0DJI8 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
SAA1P0DJI8 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
SAA1P0DJI8 AP006261.1-201ENST00000584783 668 ntBASIC20.54■□□□□ 0.88
SAA1P0DJI8 EI24-212ENST00000615917 1407 ntTSL 2 BASIC20.53■□□□□ 0.88
SAA1P0DJI8 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SAA1P0DJI8 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC20.53■□□□□ 0.88
SAA1P0DJI8 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
SAA1P0DJI8 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SAA1P0DJI8 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
SAA1P0DJI8 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
SAA1P0DJI8 BX255925.1-201ENST00000566954 1854 ntBASIC20.52■□□□□ 0.88
SAA1P0DJI8 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
SAA1P0DJI8 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.87
SAA1P0DJI8 CAPNS1-204ENST00000587718 1558 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
SAA1P0DJI8 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
SAA1P0DJI8 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
SAA1P0DJI8 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
SAA1P0DJI8 AC135983.2-203ENST00000454486 1613 ntBASIC20.5■□□□□ 0.87
SAA1P0DJI8 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC20.5■□□□□ 0.87
SAA1P0DJI8 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC20.5■□□□□ 0.87
SAA1P0DJI8 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC20.5■□□□□ 0.87
SAA1P0DJI8 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
SAA1P0DJI8 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
SAA1P0DJI8 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
SAA1P0DJI8 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
SAA1P0DJI8 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC20.49■□□□□ 0.87
SAA1P0DJI8 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC20.49■□□□□ 0.87
SAA1P0DJI8 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
SAA1P0DJI8 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
SAA1P0DJI8 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC20.48■□□□□ 0.87
SAA1P0DJI8 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
SAA1P0DJI8 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC20.48■□□□□ 0.87
SAA1P0DJI8 MEST-211ENST00000437945 1455 ntTSL 5 BASIC20.48■□□□□ 0.87
SAA1P0DJI8 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
SAA1P0DJI8 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
SAA1P0DJI8 TMEM187-201ENST00000369982 1880 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
SAA1P0DJI8 WHAMMP2-203ENST00000563942 1603 ntBASIC20.46■□□□□ 0.87
SAA1P0DJI8 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC20.46■□□□□ 0.87
SAA1P0DJI8 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC20.46■□□□□ 0.87
SAA1P0DJI8 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
SAA1P0DJI8 NRG1-221ENST00000614767 762 ntTSL 5 BASIC20.46■□□□□ 0.87
SAA1P0DJI8 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC20.46■□□□□ 0.87
SAA1P0DJI8 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
SAA1P0DJI8 LINC01003-201ENST00000564834 1764 ntBASIC20.46■□□□□ 0.87
SAA1P0DJI8 LINC00273-201ENST00000539813 1452 ntBASIC20.45■□□□□ 0.86
SAA1P0DJI8 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
SAA1P0DJI8 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
SAA1P0DJI8 AL162393.1-201ENST00000437852 946 ntBASIC20.45■□□□□ 0.86
SAA1P0DJI8 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC20.45■□□□□ 0.86
SAA1P0DJI8 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
SAA1P0DJI8 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.86
SAA1P0DJI8 AP002414.2-202ENST00000590929 1450 ntBASIC20.44■□□□□ 0.86
SAA1P0DJI8 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
SAA1P0DJI8 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC20.44■□□□□ 0.86
SAA1P0DJI8 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
SAA1P0DJI8 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC20.44■□□□□ 0.86
SAA1P0DJI8 AC087741.3-201ENST00000624270 1347 ntBASIC20.44■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 100 ms