Protein–RNA interactions for Protein: P0C7T8

TMEM253, Transmembrane protein 253, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM253P0C7T8 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC27.2■■□□□ 1.94
TMEM253P0C7T8 AC100797.4-201ENST00000631653 1827 ntBASIC27.19■■□□□ 1.94
TMEM253P0C7T8 LMO1-202ENST00000428101 1038 ntAPPRIS ALT1 TSL 1 (best) BASIC27.19■■□□□ 1.94
TMEM253P0C7T8 RPS2-209ENST00000529806 993 ntTSL 3 BASIC27.19■■□□□ 1.94
TMEM253P0C7T8 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC27.19■■□□□ 1.94
TMEM253P0C7T8 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC27.18■■□□□ 1.94
TMEM253P0C7T8 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC27.18■■□□□ 1.94
TMEM253P0C7T8 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC27.18■■□□□ 1.94
TMEM253P0C7T8 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC27.18■■□□□ 1.94
TMEM253P0C7T8 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC27.18■■□□□ 1.94
TMEM253P0C7T8 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC27.17■■□□□ 1.94
TMEM253P0C7T8 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC27.17■■□□□ 1.94
TMEM253P0C7T8 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC27.17■■□□□ 1.94
TMEM253P0C7T8 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC27.17■■□□□ 1.94
TMEM253P0C7T8 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC27.17■■□□□ 1.94
TMEM253P0C7T8 SUZ12P1-203ENST00000578195 985 ntBASIC27.17■■□□□ 1.94
TMEM253P0C7T8 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC27.17■■□□□ 1.94
TMEM253P0C7T8 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC27.17■■□□□ 1.94
TMEM253P0C7T8 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC27.16■■□□□ 1.94
TMEM253P0C7T8 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC27.16■■□□□ 1.94
TMEM253P0C7T8 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC27.16■■□□□ 1.94
TMEM253P0C7T8 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC27.16■■□□□ 1.94
TMEM253P0C7T8 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC27.15■■□□□ 1.94
TMEM253P0C7T8 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC27.15■■□□□ 1.94
TMEM253P0C7T8 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC27.15■■□□□ 1.94
TMEM253P0C7T8 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC27.15■■□□□ 1.94
TMEM253P0C7T8 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC27.14■■□□□ 1.93
TMEM253P0C7T8 AL133346.1-201ENST00000435287 495 ntTSL 2 BASIC27.13■■□□□ 1.93
TMEM253P0C7T8 AC005559.1-201ENST00000589661 871 ntBASIC27.13■■□□□ 1.93
TMEM253P0C7T8 SHF-208ENST00000560734 1731 ntTSL 3 BASIC27.13■■□□□ 1.93
TMEM253P0C7T8 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC27.12■■□□□ 1.93
TMEM253P0C7T8 LINC01003-201ENST00000564834 1764 ntBASIC27.12■■□□□ 1.93
TMEM253P0C7T8 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC27.12■■□□□ 1.93
TMEM253P0C7T8 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC27.12■■□□□ 1.93
TMEM253P0C7T8 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC27.12■■□□□ 1.93
TMEM253P0C7T8 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC27.12■■□□□ 1.93
TMEM253P0C7T8 HNRNPLP2-201ENST00000568980 1570 ntBASIC27.12■■□□□ 1.93
TMEM253P0C7T8 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC27.11■■□□□ 1.93
TMEM253P0C7T8 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC27.11■■□□□ 1.93
TMEM253P0C7T8 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC27.11■■□□□ 1.93
TMEM253P0C7T8 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC27.1■■□□□ 1.93
TMEM253P0C7T8 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC27.1■■□□□ 1.93
TMEM253P0C7T8 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC27.09■■□□□ 1.93
TMEM253P0C7T8 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC27.09■■□□□ 1.93
TMEM253P0C7T8 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC27.09■■□□□ 1.93
TMEM253P0C7T8 HOPX-206ENST00000503639 1248 ntAPPRIS P1 TSL 1 (best) BASIC27.09■■□□□ 1.93
TMEM253P0C7T8 PDCD2-215ENST00000614056 1287 ntTSL 2 BASIC27.09■■□□□ 1.93
TMEM253P0C7T8 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC27.09■■□□□ 1.93
TMEM253P0C7T8 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC27.09■■□□□ 1.93
TMEM253P0C7T8 ZNF768-201ENST00000380412 2315 ntAPPRIS P2 TSL 1 (best) BASIC27.08■■□□□ 1.93
TMEM253P0C7T8 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC27.07■■□□□ 1.92
TMEM253P0C7T8 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC27.06■■□□□ 1.92
TMEM253P0C7T8 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC27.06■■□□□ 1.92
TMEM253P0C7T8 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC27.06■■□□□ 1.92
TMEM253P0C7T8 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC27.06■■□□□ 1.92
TMEM253P0C7T8 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC27.06■■□□□ 1.92
TMEM253P0C7T8 AP002414.2-202ENST00000590929 1450 ntBASIC27.06■■□□□ 1.92
TMEM253P0C7T8 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC27.05■■□□□ 1.92
TMEM253P0C7T8 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC27.05■■□□□ 1.92
TMEM253P0C7T8 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC27.05■■□□□ 1.92
TMEM253P0C7T8 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC27.05■■□□□ 1.92
TMEM253P0C7T8 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC27.05■■□□□ 1.92
TMEM253P0C7T8 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC27.05■■□□□ 1.92
TMEM253P0C7T8 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC27.04■■□□□ 1.92
TMEM253P0C7T8 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC27.04■■□□□ 1.92
TMEM253P0C7T8 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC27.04■■□□□ 1.92
TMEM253P0C7T8 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC27.04■■□□□ 1.92
TMEM253P0C7T8 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC27.03■■□□□ 1.92
TMEM253P0C7T8 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC27.03■■□□□ 1.92
TMEM253P0C7T8 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC27.02■■□□□ 1.92
TMEM253P0C7T8 AC135983.2-203ENST00000454486 1613 ntBASIC27.02■■□□□ 1.92
TMEM253P0C7T8 MEST-211ENST00000437945 1455 ntTSL 5 BASIC27.02■■□□□ 1.92
TMEM253P0C7T8 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC27.02■■□□□ 1.92
TMEM253P0C7T8 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC27.02■■□□□ 1.92
TMEM253P0C7T8 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC27.02■■□□□ 1.92
TMEM253P0C7T8 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC27.01■■□□□ 1.91
TMEM253P0C7T8 AC108673.1-201ENST00000510422 1159 ntBASIC27.01■■□□□ 1.91
TMEM253P0C7T8 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC27■■□□□ 1.91
TMEM253P0C7T8 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC27■■□□□ 1.91
TMEM253P0C7T8 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC27■■□□□ 1.91
TMEM253P0C7T8 LYNX1-208ENST00000615007 1293 ntAPPRIS P1 TSL 1 (best) BASIC27■■□□□ 1.91
TMEM253P0C7T8 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC27■■□□□ 1.91
TMEM253P0C7T8 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC26.99■■□□□ 1.91
TMEM253P0C7T8 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC26.99■■□□□ 1.91
TMEM253P0C7T8 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC26.99■■□□□ 1.91
TMEM253P0C7T8 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC26.99■■□□□ 1.91
TMEM253P0C7T8 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC26.99■■□□□ 1.91
TMEM253P0C7T8 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC26.98■■□□□ 1.91
TMEM253P0C7T8 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC26.98■■□□□ 1.91
TMEM253P0C7T8 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC26.98■■□□□ 1.91
TMEM253P0C7T8 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC26.97■■□□□ 1.91
TMEM253P0C7T8 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC26.97■■□□□ 1.91
TMEM253P0C7T8 MIR6090-201ENST00000622481 60 ntBASIC26.97■■□□□ 1.91
TMEM253P0C7T8 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC26.97■■□□□ 1.91
TMEM253P0C7T8 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC26.96■■□□□ 1.91
TMEM253P0C7T8 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC26.96■■□□□ 1.91
TMEM253P0C7T8 DUX4L28-201ENST00000623687 678 ntBASIC26.96■■□□□ 1.91
TMEM253P0C7T8 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC26.95■■□□□ 1.9
TMEM253P0C7T8 S100A10-202ENST00000368811 1202 ntAPPRIS P1 TSL 1 (best) BASIC26.95■■□□□ 1.9
TMEM253P0C7T8 EI24-212ENST00000615917 1407 ntTSL 2 BASIC26.95■■□□□ 1.9
Retrieved 100 of 98,524 protein–RNA pairs in 71.2 ms