Protein–RNA interactions for Protein: P0C7A0

Khdc1b, KH homology domain-containing protein 1B, mousemouse

Predictions only

Length 126 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Khdc1bP0C7A0 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Khdc1bP0C7A0 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Khdc1bP0C7A0 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
Khdc1bP0C7A0 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC18.38■□□□□ 0.53
Khdc1bP0C7A0 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Khdc1bP0C7A0 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Khdc1bP0C7A0 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Khdc1bP0C7A0 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Khdc1bP0C7A0 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Khdc1bP0C7A0 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Khdc1bP0C7A0 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC18.37■□□□□ 0.53
Khdc1bP0C7A0 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Khdc1bP0C7A0 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Khdc1bP0C7A0 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Khdc1bP0C7A0 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Khdc1bP0C7A0 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
Khdc1bP0C7A0 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Khdc1bP0C7A0 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
Khdc1bP0C7A0 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC18.35■□□□□ 0.53
Khdc1bP0C7A0 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Khdc1bP0C7A0 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
Khdc1bP0C7A0 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Khdc1bP0C7A0 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Khdc1bP0C7A0 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Khdc1bP0C7A0 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Khdc1bP0C7A0 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Khdc1bP0C7A0 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.53
Khdc1bP0C7A0 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Khdc1bP0C7A0 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
Khdc1bP0C7A0 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC18.33■□□□□ 0.52
Khdc1bP0C7A0 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
Khdc1bP0C7A0 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Khdc1bP0C7A0 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Khdc1bP0C7A0 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Khdc1bP0C7A0 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Khdc1bP0C7A0 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
Khdc1bP0C7A0 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Khdc1bP0C7A0 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Khdc1bP0C7A0 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Khdc1bP0C7A0 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Khdc1bP0C7A0 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Khdc1bP0C7A0 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
Khdc1bP0C7A0 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Khdc1bP0C7A0 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC18.3■□□□□ 0.52
Khdc1bP0C7A0 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Khdc1bP0C7A0 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Khdc1bP0C7A0 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Khdc1bP0C7A0 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Khdc1bP0C7A0 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Khdc1bP0C7A0 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Khdc1bP0C7A0 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Khdc1bP0C7A0 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Khdc1bP0C7A0 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC18.28■□□□□ 0.52
Khdc1bP0C7A0 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Khdc1bP0C7A0 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
Khdc1bP0C7A0 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Khdc1bP0C7A0 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC18.27■□□□□ 0.52
Khdc1bP0C7A0 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Khdc1bP0C7A0 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Khdc1bP0C7A0 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC18.27■□□□□ 0.51
Khdc1bP0C7A0 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Khdc1bP0C7A0 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
Khdc1bP0C7A0 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
Khdc1bP0C7A0 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Khdc1bP0C7A0 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Khdc1bP0C7A0 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Khdc1bP0C7A0 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC18.25■□□□□ 0.51
Khdc1bP0C7A0 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
Khdc1bP0C7A0 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Khdc1bP0C7A0 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Khdc1bP0C7A0 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Khdc1bP0C7A0 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Khdc1bP0C7A0 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC18.24■□□□□ 0.51
Khdc1bP0C7A0 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Khdc1bP0C7A0 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC18.23■□□□□ 0.51
Khdc1bP0C7A0 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Khdc1bP0C7A0 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Khdc1bP0C7A0 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
Khdc1bP0C7A0 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC18.22■□□□□ 0.51
Khdc1bP0C7A0 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Khdc1bP0C7A0 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Khdc1bP0C7A0 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Khdc1bP0C7A0 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Khdc1bP0C7A0 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.5
Khdc1bP0C7A0 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
Khdc1bP0C7A0 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Khdc1bP0C7A0 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Khdc1bP0C7A0 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
Khdc1bP0C7A0 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC18.19■□□□□ 0.5
Khdc1bP0C7A0 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC18.19■□□□□ 0.5
Khdc1bP0C7A0 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Khdc1bP0C7A0 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Khdc1bP0C7A0 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Khdc1bP0C7A0 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Khdc1bP0C7A0 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Khdc1bP0C7A0 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Khdc1bP0C7A0 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Khdc1bP0C7A0 Il17rd-202ENSMUST00000223942 2186 ntBASIC18.18■□□□□ 0.5
Khdc1bP0C7A0 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Khdc1bP0C7A0 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 23.9 ms